BLASTX nr result

ID: Panax21_contig00029127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029127
         (1323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266726.1| PREDICTED: U-box domain-containing protein 7...   389   e-106
ref|XP_002316829.1| predicted protein [Populus trichocarpa] gi|2...   386   e-105
ref|XP_002305078.1| predicted protein [Populus trichocarpa] gi|2...   382   e-103
ref|XP_002522564.1| ubiquitin-protein ligase, putative [Ricinus ...   374   e-101
ref|XP_003593767.1| U-box domain-containing protein [Medicago tr...   368   2e-99

>ref|XP_002266726.1| PREDICTED: U-box domain-containing protein 7 [Vitis vinifera]
            gi|297740492|emb|CBI30674.3| unnamed protein product
            [Vitis vinifera]
          Length = 431

 Score =  389 bits (999), Expect = e-106
 Identities = 221/373 (59%), Positives = 265/373 (71%)
 Frame = -1

Query: 1119 SNSSTWHLAHTKLRFFTRIKRFLQLKSSNKRCEPSDHQPNKARVIDMNCDQETKQEKKME 940
            S S++W   + KLRFFTRI+RFL+ KS +KR  PS      AR  D         E  ++
Sbjct: 22   SASASWFFPYPKLRFFTRIRRFLRSKSFSKRSSPS------ARFED---------ETVIQ 66

Query: 939  RESEEDDWVVLHKSVKRLHFGSWEEKEVAAGDIKRLAGEDLKRRKSMAELGVIPPLVEMV 760
               EE++ + L +SVKRLHFGSWEEKEVAA +I+RLA ED+K RKS+AELGV+PPLV MV
Sbjct: 67   GMGEEEESLGLQRSVKRLHFGSWEEKEVAAMEIRRLAQEDVKTRKSLAELGVVPPLVAMV 126

Query: 759  GSDVVARRRLAVQALIELANGTYTNKALVMEAGILSKLPENMGVLEEETRHDFAQLILSI 580
             S VV RRRLAVQ LIELANGTYTNKAL++EAG+LS LP+N   ++E T H+FA+L+LSI
Sbjct: 127  VSPVVGRRRLAVQTLIELANGTYTNKALMVEAGLLSNLPQNTDTIDESTMHEFARLLLSI 186

Query: 579  SSLANSQFPIINSSKIIPSVISILESDSNFGTKELCLGTLYNLSTMLDNADTXXXXXXXX 400
            S L N+QFP +NS++I+P +++ILES S+  TKE C+ TLYNLS +LDN+          
Sbjct: 187  SFLTNTQFP-LNSTEILPFLVAILESGSSIETKESCICTLYNLSAVLDNSG-PLVNGGVV 244

Query: 399  XXXXXXXXVKETSEKALATLGNLVVTLMGKKVMEINPMVPESLIEIMTWEEKPKSQELCA 220
                    VKE SEKALATLGNLVVT+MGKK +E + +VPESLIEIMTWE+KPK QEL A
Sbjct: 245  QSLLRLVSVKEVSEKALATLGNLVVTMMGKKAVENSTLVPESLIEIMTWEDKPKCQELSA 304

Query: 219  YILMILAHQSSTQRLKMTNAGIXXXXXXXXXXXXXXLAQKRALKLLQWFKDERQAKMGPH 40
            YILMILAHQSS QR KM  AGI              LAQKR LKLLQWFKDERQ +MGPH
Sbjct: 305  YILMILAHQSSVQRQKMAKAGI-VPVMLEVALLGSPLAQKRVLKLLQWFKDERQTRMGPH 363

Query: 39   SGPQIRGLSFGSP 1
            SGPQ      GSP
Sbjct: 364  SGPQAGRYVMGSP 376


>ref|XP_002316829.1| predicted protein [Populus trichocarpa] gi|222859894|gb|EEE97441.1|
            predicted protein [Populus trichocarpa]
          Length = 425

 Score =  386 bits (992), Expect = e-105
 Identities = 221/371 (59%), Positives = 266/371 (71%), Gaps = 1/371 (0%)
 Frame = -1

Query: 1110 STWHLAHTKLRFFTRIKRFLQLKSSNKRCEPSDHQPNKARVIDMNCDQETKQEKKMERES 931
            S W L+H KLRFF R++RFLQ K+  +  +      NKA V   + +++     K   + 
Sbjct: 9    SIWALSHMKLRFFARVRRFLQTKTIQRNIKSR----NKAMV---SKEEQVTTADKRSGDD 61

Query: 930  EEDDWVVLHKSVKRLHFGSWEEKEVAAGDIKRLAGEDLKRRKSMAELGVIPPLVEMVGSD 751
            ++DD VVL +SVKRLHFG  EEKE+AA +I+RLA ED+K RK MAELGVIP LV MV S+
Sbjct: 62   DDDDSVVLQRSVKRLHFGGLEEKEMAAIEIERLAREDVKMRKMMAELGVIPALVGMVASE 121

Query: 750  VVARRRLAVQALIELANGTYTNKALVMEAGILSKLPENMGVLEEETRHDFAQLILSISSL 571
            +  RRR+A++ALIELANGTYTNKAL++EAGI SKLP N+ VLEE TRH+FA+LILS+SSL
Sbjct: 122  LAGRRRVAIKALIELANGTYTNKALMVEAGIFSKLPVNIDVLEEPTRHEFAELILSLSSL 181

Query: 570  AN-SQFPIINSSKIIPSVISILESDSNFGTKELCLGTLYNLSTMLDNADTXXXXXXXXXX 394
            AN +QFP+  SS+++P +I ILES S+  TKE CLGTLYNLS +LDN             
Sbjct: 182  ANHTQFPLA-SSEVLPFLIGILESGSSCETKESCLGTLYNLSAVLDNTGA-LLSNGVVQT 239

Query: 393  XXXXXXVKETSEKALATLGNLVVTLMGKKVMEINPMVPESLIEIMTWEEKPKSQELCAYI 214
                  VK  SEKALATLG+LVVTLMGKK ME + +VPESLIEIMTWE+KPK QEL AYI
Sbjct: 240  LLRLISVKALSEKALATLGHLVVTLMGKKAMENSSLVPESLIEIMTWEDKPKCQELSAYI 299

Query: 213  LMILAHQSSTQRLKMTNAGIXXXXXXXXXXXXXXLAQKRALKLLQWFKDERQAKMGPHSG 34
            LMILAHQSS QR KM  +GI              LAQKRALKLLQWFKDERQ +MGPHSG
Sbjct: 300  LMILAHQSSAQREKMAKSGI-VPALLELALLGSPLAQKRALKLLQWFKDERQTRMGPHSG 358

Query: 33   PQIRGLSFGSP 1
            PQ   ++ GSP
Sbjct: 359  PQTARIAIGSP 369


>ref|XP_002305078.1| predicted protein [Populus trichocarpa] gi|222848042|gb|EEE85589.1|
            predicted protein [Populus trichocarpa]
          Length = 437

 Score =  382 bits (980), Expect = e-103
 Identities = 223/376 (59%), Positives = 267/376 (71%), Gaps = 3/376 (0%)
 Frame = -1

Query: 1119 SNSSTWHLAHTKLRFFTRIKRFLQLKSSNKRCEPSDHQPNKARVIDMNCDQETKQEKKME 940
            S+SS + L++ KL+FF R++RFLQ K + K         NK R   M   +E      ++
Sbjct: 17   SSSSIFALSYLKLQFFARVRRFLQTKRAQKS--------NKTRTKAMVNKEEQATITTVD 68

Query: 939  RESEE--DDWVVLHKSVKRLHFGSWEEKEVAAGDIKRLAGEDLKRRKSMAELGVIPPLVE 766
            R+S +  DD VVL +SVKRLHFGSWEEKE+AA +IK+LA ED K R  MAELGVIP LV 
Sbjct: 69   RQSSDIDDDSVVLQRSVKRLHFGSWEEKEMAALEIKKLAREDAKMRNLMAELGVIPALVG 128

Query: 765  MVGSDVVARRRLAVQALIELANGTYTNKALVMEAGILSKLPENMGVLEEETRHDFAQLIL 586
            MV S+V  R+R+AV ALIELANGTY NKAL++EAGI SKLP++M VLEE TR +FA+LIL
Sbjct: 129  MVASEVAGRQRVAVNALIELANGTYKNKALMVEAGIFSKLPKSMDVLEEPTRQEFAELIL 188

Query: 585  SISSLAN-SQFPIINSSKIIPSVISILESDSNFGTKELCLGTLYNLSTMLDNADTXXXXX 409
            S+SSLAN +QFP+  SS+++P +I ILES S++ TKE CLGTLYNLS +LDNA       
Sbjct: 189  SLSSLANHTQFPLA-SSEVLPFLIGILESCSSYETKESCLGTLYNLSAVLDNAG-PLLSN 246

Query: 408  XXXXXXXXXXXVKETSEKALATLGNLVVTLMGKKVMEINPMVPESLIEIMTWEEKPKSQE 229
                        KE SEKALATLG+LVVTLMGKK ME + +VPESLIEIMTWE+KPK QE
Sbjct: 247  GAVQTLLRVISEKEFSEKALATLGHLVVTLMGKKAMENSSLVPESLIEIMTWEDKPKCQE 306

Query: 228  LCAYILMILAHQSSTQRLKMTNAGIXXXXXXXXXXXXXXLAQKRALKLLQWFKDERQAKM 49
            L AYILMILAHQSS  R KM  +GI              LAQKRALKLLQWFKDERQ +M
Sbjct: 307  LSAYILMILAHQSSALRDKMLKSGI-VPVLLEVALLGSPLAQKRALKLLQWFKDERQTRM 365

Query: 48   GPHSGPQIRGLSFGSP 1
            GPHSGPQ   ++ GSP
Sbjct: 366  GPHSGPQTARIAIGSP 381


>ref|XP_002522564.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223538255|gb|EEF39864.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 439

 Score =  374 bits (959), Expect = e-101
 Identities = 219/378 (57%), Positives = 273/378 (72%), Gaps = 5/378 (1%)
 Frame = -1

Query: 1119 SNSSTWHLAHTKLRFFTRIKRFLQLKSSNKRCEPSDHQPNKARVIDMN-----CDQETKQ 955
            S+S+ W  ++TKL+FFTRI+RFLQ K+S K      ++P    +ID N      ++E +Q
Sbjct: 11   SSSNVWLASYTKLQFFTRIRRFLQSKTSQK------NKPRTKILIDNNNNSGYYNKEVQQ 64

Query: 954  EKKMERESEEDDWVVLHKSVKRLHFGSWEEKEVAAGDIKRLAGEDLKRRKSMAELGVIPP 775
                  E +EDD VVL +SVK+LHFG+ E+KE+AA +I RLA ED+K RK MAELGVIP 
Sbjct: 65   VATDIGEGDEDDSVVLQRSVKKLHFGNCEDKEMAATEIGRLAKEDVKARKLMAELGVIPV 124

Query: 774  LVEMVGSDVVARRRLAVQALIELANGTYTNKALVMEAGILSKLPENMGVLEEETRHDFAQ 595
            LVEMV S+V +RRR+AV+ALIELANGTYTNK L++EAGILSKLP+++ V EE TRH+FA+
Sbjct: 125  LVEMVSSEVPSRRRVAVKALIELANGTYTNKTLMVEAGILSKLPKDINVSEESTRHEFAE 184

Query: 594  LILSISSLANSQFPIINSSKIIPSVISILESDSNFGTKELCLGTLYNLSTMLDNADTXXX 415
            LILS+SSL N+QF  I SS+++P ++ ILES+S+  TK+ CLGTLYNLS +L+NA     
Sbjct: 185  LILSLSSLGNTQFS-ITSSEVLPFLVGILESNSSVETKQSCLGTLYNLSAVLENAG-PLL 242

Query: 414  XXXXXXXXXXXXXVKETSEKALATLGNLVVTLMGKKVMEINPMVPESLIEIMTWEEKPKS 235
                         VKE SEK+LATLG+LVV+LMGKK ME +  VPESLIEI+TWEEKPK 
Sbjct: 243  SNGVVQILLSLISVKELSEKSLATLGHLVVSLMGKKAMENHIKVPESLIEILTWEEKPKC 302

Query: 234  QELCAYILMILAHQSSTQRLKMTNAGIXXXXXXXXXXXXXXLAQKRALKLLQWFKDERQA 55
            QEL AYILMILA+QSS  R KM  +GI              LAQKRALKLLQWFK+ERQ 
Sbjct: 303  QELSAYILMILAYQSSALRGKMEKSGI-VPVLLEVSLLGSPLAQKRALKLLQWFKNERQ- 360

Query: 54   KMGPHSGPQIRGLSFGSP 1
             MGPHSGPQ   ++ GSP
Sbjct: 361  -MGPHSGPQTGRIAVGSP 377


>ref|XP_003593767.1| U-box domain-containing protein [Medicago truncatula]
            gi|355482815|gb|AES64018.1| U-box domain-containing
            protein [Medicago truncatula]
          Length = 440

 Score =  368 bits (945), Expect = 2e-99
 Identities = 210/383 (54%), Positives = 262/383 (68%), Gaps = 10/383 (2%)
 Frame = -1

Query: 1119 SNSSTWHLAHTKLRFFTRIKRFLQLKSSNKRCEPSDH-QPNKARVIDMNCDQ------ET 961
            S+SS W L++ KL+FFTRIKRFLQ K++ KRCE SD+    K+R    N +Q      ET
Sbjct: 6    SSSSIWVLSNIKLQFFTRIKRFLQSKATRKRCESSDYLNKEKSRAEQSNIEQNMVENIET 65

Query: 960  KQ---EKKMERESEEDDWVVLHKSVKRLHFGSWEEKEVAAGDIKRLAGEDLKRRKSMAEL 790
             Q   + K E E  E+  ++L K+VK LHFGSWEEKE+AA +I+ L  ED+K RK + EL
Sbjct: 66   VQVIEKHKEEEEVVEETEILLQKTVKMLHFGSWEEKEIAAKEIESLVKEDVKVRKLITEL 125

Query: 789  GVIPPLVEMVGSDVVARRRLAVQALIELANGTYTNKALVMEAGILSKLPENMGVLEEETR 610
            GV+P LV MV S VV+ RR  + ALI LA+GTYTNKA+++EAGILSKLP+ + +++E T 
Sbjct: 126  GVVPVLVSMVASQVVSHRRAGLTALIYLADGTYTNKAMIVEAGILSKLPKTIDLVDESTI 185

Query: 609  HDFAQLILSISSLANSQFPIINSSKIIPSVISILESDSNFGTKELCLGTLYNLSTMLDNA 430
             +FA+L+LS+SSLAN+Q+P   S   +P +  IL+ D  F TK  CLG LYNLSTML+NA
Sbjct: 186  SEFAELLLSLSSLANTQYP-FPSLDFLPVIKDILKKDMTFDTKRSCLGALYNLSTMLENA 244

Query: 429  DTXXXXXXXXXXXXXXXXVKETSEKALATLGNLVVTLMGKKVMEINPMVPESLIEIMTWE 250
             +                VKE SEKALATLGNL+VTLMGKK +E N MVP++ +EI++WE
Sbjct: 245  -SPLVSYGLVPILLELSLVKEISEKALATLGNLLVTLMGKKAIENNSMVPQNFVEILSWE 303

Query: 249  EKPKSQELCAYILMILAHQSSTQRLKMTNAGIXXXXXXXXXXXXXXLAQKRALKLLQWFK 70
            +KPK QEL  YILMILAHQSS+QR KM  A I              LAQKRA+KLLQWFK
Sbjct: 304  DKPKCQELSVYILMILAHQSSSQRDKMAQARI-VPILLEVVLLGSPLAQKRAMKLLQWFK 362

Query: 69   DERQAKMGPHSGPQIRGLSFGSP 1
            DERQ KMGPHSGPQ      GSP
Sbjct: 363  DERQIKMGPHSGPQTPRFGMGSP 385


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