BLASTX nr result

ID: Panax21_contig00029123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029123
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554256.1| PREDICTED: F-box protein SKIP17-like [Glycin...    88   8e-16
ref|NP_001235043.1| uncharacterized protein LOC100306182 [Glycin...    88   8e-16
ref|XP_002520729.1| conserved hypothetical protein [Ricinus comm...    86   4e-15
ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinif...    74   9e-12
emb|CBI28700.3| unnamed protein product [Vitis vinifera]               74   9e-12

>ref|XP_003554256.1| PREDICTED: F-box protein SKIP17-like [Glycine max]
          Length = 480

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/57 (77%), Positives = 51/57 (89%)
 Frame = +1

Query: 1   VSLPSQLISSPTSDGSFFMNTSESSYNSDQGSGNEDSRDTSFVGYEESSDEVDFLSV 171
           +SLPSQL SS TSDGS FM+TSESSYNSDQGSGNED +D ++V YEESSDE+DFLS+
Sbjct: 425 ISLPSQL-SSHTSDGSIFMSTSESSYNSDQGSGNEDGQDANYVIYEESSDEIDFLSL 480


>ref|NP_001235043.1| uncharacterized protein LOC100306182 [Glycine max]
           gi|255627795|gb|ACU14242.1| unknown [Glycine max]
          Length = 142

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/57 (77%), Positives = 51/57 (89%)
 Frame = +1

Query: 1   VSLPSQLISSPTSDGSFFMNTSESSYNSDQGSGNEDSRDTSFVGYEESSDEVDFLSV 171
           +SLPSQL SS TSDGS FM+TSESSYNSDQGSGNED +D ++V YEESSDE+DFLS+
Sbjct: 87  ISLPSQL-SSHTSDGSIFMSTSESSYNSDQGSGNEDGQDANYVIYEESSDEIDFLSL 142


>ref|XP_002520729.1| conserved hypothetical protein [Ricinus communis]
           gi|223540114|gb|EEF41691.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 515

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/57 (77%), Positives = 50/57 (87%)
 Frame = +1

Query: 1   VSLPSQLISSPTSDGSFFMNTSESSYNSDQGSGNEDSRDTSFVGYEESSDEVDFLSV 171
           VSLPSQL SS TSD S FM+TSESSYNSDQ SGNE+SRD++++ YEESSDEVDFL V
Sbjct: 460 VSLPSQL-SSHTSDSSLFMSTSESSYNSDQSSGNEESRDSAYIVYEESSDEVDFLGV 515


>ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinifera]
          Length = 486

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/56 (71%), Positives = 46/56 (82%)
 Frame = +1

Query: 4   SLPSQLISSPTSDGSFFMNTSESSYNSDQGSGNEDSRDTSFVGYEESSDEVDFLSV 171
           SL SQL SS +SD S  M++SESSYNSDQGSGNED R+T +V YEESSDEVD L+V
Sbjct: 432 SLSSQL-SSHSSDSSVSMSSSESSYNSDQGSGNEDGRETGYVIYEESSDEVDILAV 486


>emb|CBI28700.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/56 (71%), Positives = 46/56 (82%)
 Frame = +1

Query: 4   SLPSQLISSPTSDGSFFMNTSESSYNSDQGSGNEDSRDTSFVGYEESSDEVDFLSV 171
           SL SQL SS +SD S  M++SESSYNSDQGSGNED R+T +V YEESSDEVD L+V
Sbjct: 478 SLSSQL-SSHSSDSSVSMSSSESSYNSDQGSGNEDGRETGYVIYEESSDEVDILAV 532


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