BLASTX nr result

ID: Panax21_contig00029117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029117
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284984.1| PREDICTED: uncharacterized protein LOC100264...   133   1e-29
ref|XP_002529364.1| protein with unknown function [Ricinus commu...   119   2e-25
ref|XP_004161051.1| PREDICTED: uncharacterized LOC101206063 [Cuc...   118   6e-25
ref|XP_004146347.1| PREDICTED: uncharacterized protein LOC101206...   118   6e-25
ref|XP_003527151.1| PREDICTED: uncharacterized protein LOC100789...   117   7e-25

>ref|XP_002284984.1| PREDICTED: uncharacterized protein LOC100264696 [Vitis vinifera]
          Length = 390

 Score =  133 bits (335), Expect = 1e-29
 Identities = 69/128 (53%), Positives = 90/128 (70%)
 Frame = -1

Query: 386 MATACLSVPIFRPVSDRFLSSRRPTTSRPAFISLSPSKQFKTGRSSSVVESKTENSSSKW 207
           MA+  L   I RP   R +  RR TT++P+ ISL P K     RS +V       +  KW
Sbjct: 1   MASTHLCHQISRPPQGRTVCFRRLTTAKPSGISLPPPKYVGNNRSLAV----RTQTHLKW 56

Query: 206 AVRMSLVEQIPSKSTVDVKRLVDFLYEDLPHLFDDQGIDRTAYSDRVKYRDPITKHETIT 27
           A+R+S+V+Q    ST+D+K+LV+FLY+DLPHLFDDQGIDRTAY D+VK+RDPITKH++I 
Sbjct: 57  ALRLSIVDQSQPTSTIDMKQLVNFLYDDLPHLFDDQGIDRTAYDDQVKFRDPITKHDSIG 116

Query: 26  GYLFNIAM 3
           GYLFNI +
Sbjct: 117 GYLFNIGL 124


>ref|XP_002529364.1| protein with unknown function [Ricinus communis]
           gi|223531184|gb|EEF33031.1| protein with unknown
           function [Ricinus communis]
          Length = 381

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/94 (62%), Positives = 75/94 (79%), Gaps = 2/94 (2%)
 Frame = -1

Query: 278 SKQFKTGRSSSVVESKTENSSSKWAVRMSLVEQIP--SKSTVDVKRLVDFLYEDLPHLFD 105
           S  FKT + S      T N +SKW++R+SLVEQ P    + VDVK+L++FLY+DLPHLFD
Sbjct: 26  SSNFKTTKLSVT----TTNQNSKWSLRLSLVEQSPPAESTKVDVKQLMNFLYDDLPHLFD 81

Query: 104 DQGIDRTAYSDRVKYRDPITKHETITGYLFNIAM 3
           DQGID+TAY DRVK+RDPITKH++I+GYLFNIA+
Sbjct: 82  DQGIDQTAYDDRVKFRDPITKHDSISGYLFNIAL 115


>ref|XP_004161051.1| PREDICTED: uncharacterized LOC101206063 [Cucumis sativus]
          Length = 496

 Score =  118 bits (295), Expect = 6e-25
 Identities = 53/77 (68%), Positives = 67/77 (87%)
 Frame = -1

Query: 233 KTENSSSKWAVRMSLVEQIPSKSTVDVKRLVDFLYEDLPHLFDDQGIDRTAYSDRVKYRD 54
           K    +SKW VR +LV+QIP KST+DV RLVDFL+EDL HLFD+QGIDRTAY ++V++RD
Sbjct: 154 KPHTKNSKWVVRCNLVDQIPPKSTLDVGRLVDFLHEDLSHLFDEQGIDRTAYDEQVRFRD 213

Query: 53  PITKHETITGYLFNIAM 3
           PITKH+TI+GYLFNI++
Sbjct: 214 PITKHDTISGYLFNISL 230


>ref|XP_004146347.1| PREDICTED: uncharacterized protein LOC101206063 [Cucumis sativus]
          Length = 1115

 Score =  118 bits (295), Expect = 6e-25
 Identities = 53/77 (68%), Positives = 67/77 (87%)
 Frame = -1

Query: 233  KTENSSSKWAVRMSLVEQIPSKSTVDVKRLVDFLYEDLPHLFDDQGIDRTAYSDRVKYRD 54
            K    +SKW VR +LV+QIP KST+DV RLVDFL+EDL HLFD+QGIDRTAY ++V++RD
Sbjct: 773  KPHTKNSKWVVRCNLVDQIPPKSTLDVGRLVDFLHEDLSHLFDEQGIDRTAYDEQVRFRD 832

Query: 53   PITKHETITGYLFNIAM 3
            PITKH+TI+GYLFNI++
Sbjct: 833  PITKHDTISGYLFNISL 849


>ref|XP_003527151.1| PREDICTED: uncharacterized protein LOC100789568 [Glycine max]
          Length = 387

 Score =  117 bits (294), Expect = 7e-25
 Identities = 65/128 (50%), Positives = 88/128 (68%)
 Frame = -1

Query: 386 MATACLSVPIFRPVSDRFLSSRRPTTSRPAFISLSPSKQFKTGRSSSVVESKTENSSSKW 207
           MAT+ LS    RP     +SSR P+ +      L P  + +       +  KT N+ SKW
Sbjct: 1   MATSNLSHQTARPFPTACVSSRPPSAAVNLRRHLPPPPKPRK------LTLKT-NNRSKW 53

Query: 206 AVRMSLVEQIPSKSTVDVKRLVDFLYEDLPHLFDDQGIDRTAYSDRVKYRDPITKHETIT 27
           A+++SLVEQ P KST ++++LV FLY+DL HLFDDQGID+TAY +RV +RDPITKH+T++
Sbjct: 54  AIQLSLVEQSPPKSTFNMQQLVGFLYDDLTHLFDDQGIDQTAYDERVFFRDPITKHDTLS 113

Query: 26  GYLFNIAM 3
           GYLFNIA+
Sbjct: 114 GYLFNIAL 121


Top