BLASTX nr result

ID: Panax21_contig00029104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029104
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863232.1| hypothetical protein ARALYDRAFT_497147 [Arab...    90   2e-16
ref|NP_193004.2| uncharacterized protein [Arabidopsis thaliana] ...    89   3e-16
emb|CAB40985.1| putative protein [Arabidopsis thaliana] gi|72679...    89   3e-16
ref|XP_003556769.1| PREDICTED: uncharacterized membrane protein ...    89   5e-16
ref|XP_003601496.1| Membrane protein, putative [Medicago truncat...    82   4e-14

>ref|XP_002863232.1| hypothetical protein ARALYDRAFT_497147 [Arabidopsis lyrata subsp.
           lyrata] gi|297309066|gb|EFH39491.1| hypothetical protein
           ARALYDRAFT_497147 [Arabidopsis lyrata subsp. lyrata]
          Length = 575

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 44/62 (70%), Positives = 54/62 (87%)
 Frame = -1

Query: 368 PSSDSVKKAQLQAIIRRLQGIVGFMSRMPTFRRRFRNLVKVLYLEAIQIGLIANQDRGSL 189
           PSSD+V+KAQLQAIIRRLQG+V  MSR+PTFRRRF NLVKVLY+EA+++G+  N+  G L
Sbjct: 495 PSSDTVRKAQLQAIIRRLQGMVASMSRIPTFRRRFMNLVKVLYIEALEMGVSGNRAGGIL 554

Query: 188 KP 183
           KP
Sbjct: 555 KP 556


>ref|NP_193004.2| uncharacterized protein [Arabidopsis thaliana]
           gi|71905515|gb|AAZ52735.1| expressed protein
           [Arabidopsis thaliana] gi|332657762|gb|AEE83162.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 575

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/62 (70%), Positives = 53/62 (85%)
 Frame = -1

Query: 368 PSSDSVKKAQLQAIIRRLQGIVGFMSRMPTFRRRFRNLVKVLYLEAIQIGLIANQDRGSL 189
           PSSD+V+KAQLQAIIRRLQG+V  MSR+PTFRRRF NLVKVLY+EA+++G   N+  G L
Sbjct: 495 PSSDTVRKAQLQAIIRRLQGMVASMSRIPTFRRRFMNLVKVLYIEALEMGASGNRAGGIL 554

Query: 188 KP 183
           KP
Sbjct: 555 KP 556


>emb|CAB40985.1| putative protein [Arabidopsis thaliana] gi|7267969|emb|CAB78310.1|
           putative protein [Arabidopsis thaliana]
          Length = 590

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/62 (70%), Positives = 53/62 (85%)
 Frame = -1

Query: 368 PSSDSVKKAQLQAIIRRLQGIVGFMSRMPTFRRRFRNLVKVLYLEAIQIGLIANQDRGSL 189
           PSSD+V+KAQLQAIIRRLQG+V  MSR+PTFRRRF NLVKVLY+EA+++G   N+  G L
Sbjct: 510 PSSDTVRKAQLQAIIRRLQGMVASMSRIPTFRRRFMNLVKVLYIEALEMGASGNRAGGIL 569

Query: 188 KP 183
           KP
Sbjct: 570 KP 571


>ref|XP_003556769.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Glycine
           max]
          Length = 580

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/62 (70%), Positives = 52/62 (83%)
 Frame = -1

Query: 368 PSSDSVKKAQLQAIIRRLQGIVGFMSRMPTFRRRFRNLVKVLYLEAIQIGLIANQDRGSL 189
           PS D+V++AQLQAIIRRLQGIV  MSRMPTFRRRFRNL+KVLY+EA+Q G  A+   G+L
Sbjct: 495 PSDDTVRRAQLQAIIRRLQGIVASMSRMPTFRRRFRNLIKVLYIEALQAGASASHIGGTL 554

Query: 188 KP 183
            P
Sbjct: 555 IP 556


>ref|XP_003601496.1| Membrane protein, putative [Medicago truncatula]
           gi|355490544|gb|AES71747.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 557

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 40/62 (64%), Positives = 49/62 (79%)
 Frame = -1

Query: 368 PSSDSVKKAQLQAIIRRLQGIVGFMSRMPTFRRRFRNLVKVLYLEAIQIGLIANQDRGSL 189
           PS D+V++AQLQAIIRRLQGIV  MSRMPTFRR+FRNLVK+LY+EA+Q    A +     
Sbjct: 496 PSKDNVRRAQLQAIIRRLQGIVSSMSRMPTFRRKFRNLVKILYIEALQASASAKEGNNID 555

Query: 188 KP 183
           +P
Sbjct: 556 EP 557


Top