BLASTX nr result

ID: Panax21_contig00029100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029100
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199928.1| Mitochondrial import inner membrane translocase...    62   1e-07
gb|AFJ66177.1| hypothetical protein 11M19.22 [Arabidopsis halleri]     62   1e-07
ref|XP_002864099.1| hypothetical protein ARALYDRAFT_918148 [Arab...    62   1e-07
ref|XP_002511035.1| conserved hypothetical protein [Ricinus comm...    59   5e-07
ref|XP_002321783.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>ref|NP_199928.1| Mitochondrial import inner membrane translocase subunit
           Tim17/Tim22/Tim23 family protein [Arabidopsis thaliana]
           gi|8843851|dbj|BAA97377.1| unnamed protein product
           [Arabidopsis thaliana] gi|15027963|gb|AAK76512.1|
           unknown protein [Arabidopsis thaliana]
           gi|20259195|gb|AAM14313.1| unknown protein [Arabidopsis
           thaliana] gi|332008661|gb|AED96044.1| Mitochondrial
           import inner membrane translocase subunit
           Tim17/Tim22/Tim23 family protein [Arabidopsis thaliana]
          Length = 531

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
 Frame = +2

Query: 101 CDHADDSFVTNAIGNLCQSFLLSYGVRVGFGQPVRS-----GHCFTNRSDLGQIRATK 259
           CDHAD S V NAIGNLCQSFLLSYGVRVG G  +R+     G  +++  DL Q+ + K
Sbjct: 63  CDHADVSCVANAIGNLCQSFLLSYGVRVGIGILLRAFKLARGQSYSSLLDLKQLVSEK 120


>gb|AFJ66177.1| hypothetical protein 11M19.22 [Arabidopsis halleri]
          Length = 458

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
 Frame = +2

Query: 101 CDHADDSFVTNAIGNLCQSFLLSYGVRVGFGQPVRS-----GHCFTNRSDLGQIRATK 259
           CDHAD S V NAIGNLCQSFLLSYGVRVG G  +R+     G  +++  DL Q+ + K
Sbjct: 63  CDHADVSCVANAIGNLCQSFLLSYGVRVGIGILLRAFKLARGQSYSSLLDLKQLVSEK 120


>ref|XP_002864099.1| hypothetical protein ARALYDRAFT_918148 [Arabidopsis lyrata subsp.
           lyrata] gi|297309934|gb|EFH40358.1| hypothetical protein
           ARALYDRAFT_918148 [Arabidopsis lyrata subsp. lyrata]
          Length = 531

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
 Frame = +2

Query: 101 CDHADDSFVTNAIGNLCQSFLLSYGVRVGFGQPVRS-----GHCFTNRSDLGQIRATK 259
           CDHAD S V NAIGNLCQSFLLSYGVRVG G  +R+     G  +++  DL Q+ + K
Sbjct: 63  CDHADVSCVANAIGNLCQSFLLSYGVRVGIGILLRAFKLARGQSYSSLLDLKQLVSEK 120


>ref|XP_002511035.1| conserved hypothetical protein [Ricinus communis]
           gi|223550150|gb|EEF51637.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 525

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 6/60 (10%)
 Frame = +2

Query: 98  PCDH-ADDSFVTNAIGNLCQSFLLSYGVRVGFGQPVRS-----GHCFTNRSDLGQIRATK 259
           PCDH AD+S V +AIGNLCQSFLLSYGVRVG G  +R+     G  +++  DL Q+ + K
Sbjct: 56  PCDHPADESCVAHAIGNLCQSFLLSYGVRVGVGILLRAFKLAKGQSYSSLLDLKQLVSEK 115


>ref|XP_002321783.1| predicted protein [Populus trichocarpa] gi|222868779|gb|EEF05910.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 6/60 (10%)
 Frame = +2

Query: 98  PCDHA-DDSFVTNAIGNLCQSFLLSYGVRVGFGQPVRS-----GHCFTNRSDLGQIRATK 259
           PCDH  D+S   +AIGNLCQSFLLSYGVRVG G  +R+     GH +++  DL Q+ + K
Sbjct: 52  PCDHGPDESCAAHAIGNLCQSFLLSYGVRVGIGILLRAFKLAKGHSYSSILDLKQLVSEK 111


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