BLASTX nr result

ID: Panax21_contig00029072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029072
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15263.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002267724.2| PREDICTED: uncharacterized protein LOC100265...    64   2e-08
emb|CAN69398.1| hypothetical protein VITISV_021036 [Vitis vinifera]    64   2e-08
ref|XP_004152536.1| PREDICTED: uncharacterized protein LOC101218...    60   1e-07

>emb|CBI15263.3| unnamed protein product [Vitis vinifera]
          Length = 698

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/84 (46%), Positives = 47/84 (55%)
 Frame = +1

Query: 118 HSWHVRPPPIIQGNNTICPTCSISHFPFCPSRPSINENPNRFIQSHNNDYFFPERPQFDY 297
           H W  RP   IQGN  ICP CSISHFPFCP  PS+++ P   ++  NN  F  +RP  D 
Sbjct: 3   HQWRPRP---IQGN--ICPICSISHFPFCPPHPSLDQYPRFSLE--NNRLF--QRPVLDP 53

Query: 298 RPYNHHAPTDNFHPNDGFGDRLAW 369
              N   P   + PNDG+GD   W
Sbjct: 54  LIDNRAHPFVGY-PNDGYGDPRFW 76


>ref|XP_002267724.2| PREDICTED: uncharacterized protein LOC100265726, partial [Vitis
           vinifera]
          Length = 1001

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/82 (46%), Positives = 46/82 (56%)
 Frame = +1

Query: 124 WHVRPPPIIQGNNTICPTCSISHFPFCPSRPSINENPNRFIQSHNNDYFFPERPQFDYRP 303
           W  RP   IQGN  ICP CSISHFPFCP  PS+++ P   ++  NN  F  +RP  D   
Sbjct: 18  WRPRP---IQGN--ICPICSISHFPFCPPHPSLDQYPRFSLE--NNRLF--QRPVLDPLI 68

Query: 304 YNHHAPTDNFHPNDGFGDRLAW 369
            N   P   + PNDG+GD   W
Sbjct: 69  DNRAHPFVGY-PNDGYGDPRFW 89


>emb|CAN69398.1| hypothetical protein VITISV_021036 [Vitis vinifera]
          Length = 675

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/84 (45%), Positives = 46/84 (54%)
 Frame = +1

Query: 118 HSWHVRPPPIIQGNNTICPTCSISHFPFCPSRPSINENPNRFIQSHNNDYFFPERPQFDY 297
           H W  RP   IQGN  ICP CSISHFPFCP  PS+++     ++  NN  F  +RP  D 
Sbjct: 3   HQWRPRP---IQGN--ICPICSISHFPFCPPHPSLDQYXRFSLE--NNRLF--QRPVLDP 53

Query: 298 RPYNHHAPTDNFHPNDGFGDRLAW 369
              N   P   + PNDG+GD   W
Sbjct: 54  LIDNRAHPFVGY-PNDGYGDPRFW 76


>ref|XP_004152536.1| PREDICTED: uncharacterized protein LOC101218580 [Cucumis sativus]
           gi|449516842|ref|XP_004165455.1| PREDICTED:
           uncharacterized LOC101218580 [Cucumis sativus]
          Length = 884

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
 Frame = +1

Query: 115 HH--SWHVRPPPIIQGNNTICPTCSISHFPFCPSRPSINENPNRFIQSHNNDYFFPERPQ 288
           HH   WH RP   IQ   T+CP C++SHFPFCP  PS N+NP         D+ F     
Sbjct: 6   HHPQQWHPRP---IQP--TVCPICTMSHFPFCPPHPSFNQNPR---YPFGPDHSFQTSGF 57

Query: 289 FDYRPYNHHAPTDNFHPNDGFGDRLAW 369
             +R      P    +P+DGF D+  W
Sbjct: 58  DSHRSPMRMPPPYMANPDDGFADQRPW 84


Top