BLASTX nr result

ID: Panax21_contig00029071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029071
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20821.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_002281010.1| PREDICTED: endonuclease V-like [Vitis vinifera]   160   1e-37
ref|XP_003544632.1| PREDICTED: endonuclease V [Glycine max]           152   3e-35
gb|ACU16817.1| unknown [Glycine max]                                  151   6e-35
ref|XP_002867312.1| endonuclease V family protein [Arabidopsis l...   148   4e-34

>emb|CBI20821.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  160 bits (404), Expect = 1e-37
 Identities = 85/159 (53%), Positives = 105/159 (66%), Gaps = 9/159 (5%)
 Frame = +1

Query: 13  MFEGKKASTPGSSLTSENP--TDWIEAQDVLKRKLVTKDIFNWEL-------RTRKHSEG 165
           MF  +K ++P  S    +    +WI+ QD LKR+LVT+D F W+L         R   E 
Sbjct: 11  MFSMEKRASPEISSAESHQFIENWIQVQDSLKRRLVTEDDFTWKLPKPTSTATVRGRIEE 70

Query: 166 GGDECSRLLKYVGGVDLSYSKEDPSIACGXXXXXXXXXXXXXYEDSSVVRLDVPYVPGFL 345
           G D+   +LKYVGGVD+S+SK+DPS+ACG             Y+D SVVRL  PYVPGFL
Sbjct: 71  GDDK--HVLKYVGGVDVSFSKDDPSVACGTIVVLDLGTLEVVYDDYSVVRLQTPYVPGFL 128

Query: 346 AFREAPVLLEILEKMKACSHPLYPQLLMVDGNGILHPRG 462
           A REAPVLL++LEKMK  +HP YPQLLMVDGNG+LHPRG
Sbjct: 129 ALREAPVLLKLLEKMKNSAHPFYPQLLMVDGNGLLHPRG 167


>ref|XP_002281010.1| PREDICTED: endonuclease V-like [Vitis vinifera]
          Length = 285

 Score =  160 bits (404), Expect = 1e-37
 Identities = 85/159 (53%), Positives = 105/159 (66%), Gaps = 9/159 (5%)
 Frame = +1

Query: 13  MFEGKKASTPGSSLTSENP--TDWIEAQDVLKRKLVTKDIFNWEL-------RTRKHSEG 165
           MF  +K ++P  S    +    +WI+ QD LKR+LVT+D F W+L         R   E 
Sbjct: 11  MFSMEKRASPEISSAESHQFIENWIQVQDSLKRRLVTEDDFTWKLPKPTSTATVRGRIEE 70

Query: 166 GGDECSRLLKYVGGVDLSYSKEDPSIACGXXXXXXXXXXXXXYEDSSVVRLDVPYVPGFL 345
           G D+   +LKYVGGVD+S+SK+DPS+ACG             Y+D SVVRL  PYVPGFL
Sbjct: 71  GDDK--HVLKYVGGVDVSFSKDDPSVACGTIVVLDLGTLEVVYDDYSVVRLQTPYVPGFL 128

Query: 346 AFREAPVLLEILEKMKACSHPLYPQLLMVDGNGILHPRG 462
           A REAPVLL++LEKMK  +HP YPQLLMVDGNG+LHPRG
Sbjct: 129 ALREAPVLLKLLEKMKNSAHPFYPQLLMVDGNGLLHPRG 167


>ref|XP_003544632.1| PREDICTED: endonuclease V [Glycine max]
          Length = 268

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/136 (55%), Positives = 95/136 (69%)
 Frame = +1

Query: 55  TSENPTDWIEAQDVLKRKLVTKDIFNWELRTRKHSEGGGDECSRLLKYVGGVDLSYSKED 234
           +S +   WI AQ++L+ KL+T+D F W+L+        G +    L+YVGGVD+S+SK+D
Sbjct: 18  SSRDNQTWITAQNILREKLITEDCFAWKLQA-------GSKEEEALRYVGGVDISFSKDD 70

Query: 235 PSIACGXXXXXXXXXXXXXYEDSSVVRLDVPYVPGFLAFREAPVLLEILEKMKACSHPLY 414
           PS ACG             Y+D S+V L VPYVPGFLAFREAPVLL++LEKMK  ++P Y
Sbjct: 71  PSRACGTLVVLDFHTLQVLYQDFSLVTLQVPYVPGFLAFREAPVLLQLLEKMKRSNNPFY 130

Query: 415 PQLLMVDGNGILHPRG 462
           PQLLMVDGNGILHPRG
Sbjct: 131 PQLLMVDGNGILHPRG 146


>gb|ACU16817.1| unknown [Glycine max]
          Length = 224

 Score =  151 bits (381), Expect = 6e-35
 Identities = 75/136 (55%), Positives = 94/136 (69%)
 Frame = +1

Query: 55  TSENPTDWIEAQDVLKRKLVTKDIFNWELRTRKHSEGGGDECSRLLKYVGGVDLSYSKED 234
           +S +   WI AQ++L+ KL T+D F W+L+        G +    L+YVGGVD+S+SK+D
Sbjct: 18  SSRDNQTWITAQNILREKLTTEDCFAWKLQA-------GSKEEEALRYVGGVDISFSKDD 70

Query: 235 PSIACGXXXXXXXXXXXXXYEDSSVVRLDVPYVPGFLAFREAPVLLEILEKMKACSHPLY 414
           PS ACG             Y+D S+V L VPYVPGFLAFREAPVLL++LEKMK  ++P Y
Sbjct: 71  PSRACGTLVVLDFHTLQVLYQDFSLVTLQVPYVPGFLAFREAPVLLQLLEKMKRSNNPFY 130

Query: 415 PQLLMVDGNGILHPRG 462
           PQLLMVDGNGILHPRG
Sbjct: 131 PQLLMVDGNGILHPRG 146


>ref|XP_002867312.1| endonuclease V family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313148|gb|EFH43571.1| endonuclease V family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 277

 Score =  148 bits (374), Expect = 4e-34
 Identities = 75/139 (53%), Positives = 92/139 (66%)
 Frame = +1

Query: 46  SSLTSENPTDWIEAQDVLKRKLVTKDIFNWELRTRKHSEGGGDECSRLLKYVGGVDLSYS 225
           SS + +    WIE QD LK+KL+  D F W+L +      G    S +LKYVGGVD+S+ 
Sbjct: 10  SSSSGDQLEKWIEEQDQLKKKLIAYDDFTWKLSSSMELSHG----SEILKYVGGVDMSFC 65

Query: 226 KEDPSIACGXXXXXXXXXXXXXYEDSSVVRLDVPYVPGFLAFREAPVLLEILEKMKACSH 405
           KED S+AC              + D S++RL VPYVPGFLAFREAPVLL+IL+KM+   H
Sbjct: 66  KEDSSVACACLVVLELPSLRVVHHDFSLLRLHVPYVPGFLAFREAPVLLQILQKMRDDKH 125

Query: 406 PLYPQLLMVDGNGILHPRG 462
           P YPQ+LMVDGNGILHPRG
Sbjct: 126 PFYPQVLMVDGNGILHPRG 144


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