BLASTX nr result

ID: Panax21_contig00029068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029068
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26137.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_002277039.1| PREDICTED: squamosa promoter-binding-like pr...    86   4e-15
ref|XP_002516839.1| Squamosa promoter-binding protein, putative ...    77   1e-12
ref|XP_004134466.1| PREDICTED: squamosa promoter-binding-like pr...    60   2e-07

>emb|CBI26137.3| unnamed protein product [Vitis vinifera]
          Length = 692

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
 Frame = +2

Query: 20  DMKLYQSNIDNVSGIISQKFEKKMNPVLHVRDLASKGDFFDQSSKIDVFPVVHVTNQDKV 199
           D++L    +D+ S I+ QK       VLH  +  +KGD        ++ PVV      K+
Sbjct: 539 DLRLLYKYMDHASKILHQKLHSSGGLVLHSGNSVTKGDH-PSCFHNNMLPVVFPPEDTKI 597

Query: 200 TEKIKSGALVASTSPDRSETAPLLNAEVVMNVNLLKD-PRKASGHLFTNTVLPSRHLIFI 376
           +      A+ +STS DRSET  LLN EVVMN+N +K+ PRK+   +F+   + SR  +++
Sbjct: 598 SANGGLAAMASSTSTDRSETVSLLNREVVMNMNSIKEQPRKSCSLIFSKKAMTSRPFLYM 657

Query: 377 ISXXXXXXXXXXXXLHPRKVGEFAITIRR 463
           I             LHP +VG+ A++IRR
Sbjct: 658 IVAAAACFGICAVLLHPHEVGKLAVSIRR 686


>ref|XP_002277039.1| PREDICTED: squamosa promoter-binding-like protein 7-like [Vitis
            vinifera]
          Length = 801

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
 Frame = +2

Query: 20   DMKLYQSNIDNVSGIISQKFEKKMNPVLHVRDLASKGDFFDQSSKIDVFPVVHVTNQDKV 199
            D++L    +D+ S I+ QK       VLH  +  +KGD        ++ PVV      K+
Sbjct: 648  DLRLLYKYMDHASKILHQKLHSSGGLVLHSGNSVTKGDH-PSCFHNNMLPVVFPPEDTKI 706

Query: 200  TEKIKSGALVASTSPDRSETAPLLNAEVVMNVNLLKD-PRKASGHLFTNTVLPSRHLIFI 376
            +      A+ +STS DRSET  LLN EVVMN+N +K+ PRK+   +F+   + SR  +++
Sbjct: 707  SANGGLAAMASSTSTDRSETVSLLNREVVMNMNSIKEQPRKSCSLIFSKKAMTSRPFLYM 766

Query: 377  ISXXXXXXXXXXXXLHPRKVGEFAITIRR 463
            I             LHP +VG+ A++IRR
Sbjct: 767  IVAAAACFGICAVLLHPHEVGKLAVSIRR 795


>ref|XP_002516839.1| Squamosa promoter-binding protein, putative [Ricinus communis]
            gi|223543927|gb|EEF45453.1| Squamosa promoter-binding
            protein, putative [Ricinus communis]
          Length = 795

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 2/151 (1%)
 Frame = +2

Query: 17   ADMKLYQSNIDNVSGIISQKFEKKMNPVLHVRDLASKGDFFDQSSKIDVFPVVHVTNQDK 196
            ADMKL Q ++D    I+ QK  KK + +L   +   +G    + S  D   V   T++D 
Sbjct: 640  ADMKLLQKHVDWAWNILYQKV-KKRDGLLLQWECTIQGRSSGKCSDGDGPSVAPFTSEDL 698

Query: 197  VTEKIKSGALVASTSPD-RSETAPLLNAEVVMNVNLLKD-PRKASGHLFTNTVLPSRHLI 370
                     L+A+TS   RS+  PLLN EVVMNVNL+KD P ++   +F+  VL SR  +
Sbjct: 699  EKSSTGKLGLIANTSDFVRSDKVPLLNKEVVMNVNLVKDRPNQSCSLIFSKRVLRSRPTV 758

Query: 371  FIISXXXXXXXXXXXXLHPRKVGEFAITIRR 463
            F+I+            LHP +V  FA+++RR
Sbjct: 759  FLIATVAVCFGVCAIILHPNQVSRFAVSVRR 789


>ref|XP_004134466.1| PREDICTED: squamosa promoter-binding-like protein 7-like [Cucumis
            sativus]
          Length = 741

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
 Frame = +2

Query: 20   DMKLYQSNIDNVSGIISQKFEKKMNPVLHVRDLASKGDFFDQSSK----IDVFPVVHVTN 187
            D++ ++  +D    ++     K  N VLH+  L  KG    QSS     + V P   +  
Sbjct: 586  DLRFFEKYLDYAGDVLQLNLRKAGNSVLHLGFLKPKGGHVSQSSSENKLVSVAPGTTLKM 645

Query: 188  QDKVTEKIKSGALVASTSPDRSETAPLLNAEVVMNVNLLKDPRKASGHLFTNTVLPSRHL 367
            + +  E     A+  S S    ET PL+N ++   + + +  RK+ G  F+  +   +  
Sbjct: 646  EPR--ENGHFPAVAGSISTGNVETIPLINEKLSEKITIQEHSRKSCGLQFSGVLFRRQTT 703

Query: 368  IFIISXXXXXXXXXXXXLHPRKVGEFAITIRR 463
            +F ++            +H  KVGEFAI+IRR
Sbjct: 704  LFAVTFVAVCFGVCAALVHSHKVGEFAISIRR 735


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