BLASTX nr result

ID: Panax21_contig00029067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029067
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26137.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002277039.1| PREDICTED: squamosa promoter-binding-like pr...    95   5e-18
ref|XP_002516839.1| Squamosa promoter-binding protein, putative ...    81   1e-13
ref|XP_003547221.1| PREDICTED: squamosa promoter-binding-like pr...    58   9e-07
ref|XP_002311811.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>emb|CBI26137.3| unnamed protein product [Vitis vinifera]
          Length = 692

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 58/157 (36%), Positives = 87/157 (55%), Gaps = 4/157 (2%)
 Frame = -2

Query: 461 GVADADMKLYQRNIDNVSVILSQKFEKKMNPVLHVRDLASKGDF---FYQSSKIDVFPVV 291
           G  D D++L  + +D+ S IL QK       VLH  +  +KGD    F+ +    + PVV
Sbjct: 534 GATDTDLRLLYKYMDHASKILHQKLHSSGGLVLHSGNSVTKGDHPSCFHNN----MLPVV 589

Query: 290 HVTNQDKVTEKIKSGALVDSTSPDRSETVPLLNAEVVMNVNLLKD-PRKASSRLFTNTVL 114
                 K++      A+  STS DRSETV LLN EVVMN+N +K+ PRK+ S +F+   +
Sbjct: 590 FPPEDTKISANGGLAAMASSTSTDRSETVSLLNREVVMNMNSIKEQPRKSCSLIFSKKAM 649

Query: 113 PSRHLIFIISXXXXXXXXXXXVLHPRKVGEIAITIRR 3
            SR  +++I            +LHP +VG++A++IRR
Sbjct: 650 TSRPFLYMIVAAAACFGICAVLLHPHEVGKLAVSIRR 686


>ref|XP_002277039.1| PREDICTED: squamosa promoter-binding-like protein 7-like [Vitis
            vinifera]
          Length = 801

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 58/157 (36%), Positives = 87/157 (55%), Gaps = 4/157 (2%)
 Frame = -2

Query: 461  GVADADMKLYQRNIDNVSVILSQKFEKKMNPVLHVRDLASKGDF---FYQSSKIDVFPVV 291
            G  D D++L  + +D+ S IL QK       VLH  +  +KGD    F+ +    + PVV
Sbjct: 643  GATDTDLRLLYKYMDHASKILHQKLHSSGGLVLHSGNSVTKGDHPSCFHNN----MLPVV 698

Query: 290  HVTNQDKVTEKIKSGALVDSTSPDRSETVPLLNAEVVMNVNLLKD-PRKASSRLFTNTVL 114
                  K++      A+  STS DRSETV LLN EVVMN+N +K+ PRK+ S +F+   +
Sbjct: 699  FPPEDTKISANGGLAAMASSTSTDRSETVSLLNREVVMNMNSIKEQPRKSCSLIFSKKAM 758

Query: 113  PSRHLIFIISXXXXXXXXXXXVLHPRKVGEIAITIRR 3
             SR  +++I            +LHP +VG++A++IRR
Sbjct: 759  TSRPFLYMIVAAAACFGICAVLLHPHEVGKLAVSIRR 795


>ref|XP_002516839.1| Squamosa promoter-binding protein, putative [Ricinus communis]
            gi|223543927|gb|EEF45453.1| Squamosa promoter-binding
            protein, putative [Ricinus communis]
          Length = 795

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 2/155 (1%)
 Frame = -2

Query: 461  GVADADMKLYQRNIDNVSVILSQKFEKKMNPVLHVRDLASKGDFFYQSSKIDVFPVVHVT 282
            G +DADMKL Q+++D    IL QK  KK + +L   +   +G    + S  D   V   T
Sbjct: 636  GSSDADMKLLQKHVDWAWNILYQKV-KKRDGLLLQWECTIQGRSSGKCSDGDGPSVAPFT 694

Query: 281  NQD-KVTEKIKSGALVDSTSPDRSETVPLLNAEVVMNVNLLKD-PRKASSRLFTNTVLPS 108
            ++D + +   K G + +++   RS+ VPLLN EVVMNVNL+KD P ++ S +F+  VL S
Sbjct: 695  SEDLEKSSTGKLGLIANTSDFVRSDKVPLLNKEVVMNVNLVKDRPNQSCSLIFSKRVLRS 754

Query: 107  RHLIFIISXXXXXXXXXXXVLHPRKVGEIAITIRR 3
            R  +F+I+           +LHP +V   A+++RR
Sbjct: 755  RPTVFLIATVAVCFGVCAIILHPNQVSRFAVSVRR 789


>ref|XP_003547221.1| PREDICTED: squamosa promoter-binding-like protein 7-like [Glycine
            max]
          Length = 791

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
 Frame = -2

Query: 455  ADADMKLYQRNIDNVSVILSQKFEKKMNPVLHVRDLASKGDFFYQSSKIDVFPVVHVTNQ 276
            +D D+     +I N S ++ QK ++  + ++H      +G    Q    D    V + +Q
Sbjct: 640  SDVDITQLLNHIHNASNVICQKHQQSRSIIVHSE---MEGFKLAQGCSQDNMLSVAINSQ 696

Query: 275  DKVTEKI-KSGALVDSTSPDRSETVPLLNAEVVMNVNLLKDPRKASSRLFTNTVLPSRHL 99
              ++    K G L   TS D++E +PLL  +++M+V  L  P +   R      L SR  
Sbjct: 697  GILSRTDEKWGVLKSPTSNDKTERIPLLKRDIIMSVEEL--PERYGRRCLGRGFLTSRPA 754

Query: 98   IFIISXXXXXXXXXXXVLHPRKVGEIAITIRR 3
            IF+I            VLHP +V E+A+++RR
Sbjct: 755  IFVIVSVAVCLGVCVAVLHPGRVSELAVSVRR 786


>ref|XP_002311811.1| predicted protein [Populus trichocarpa] gi|222851631|gb|EEE89178.1|
            predicted protein [Populus trichocarpa]
          Length = 793

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
 Frame = -2

Query: 461  GVADADMKLYQRNIDNVSVILSQKFEKKMNPVLHVRDLASKGDFFYQSSKIDVFPVVHVT 282
            G +D +M+L Q  +D  S I  +K ++    + H  + + K +     S           
Sbjct: 633  GTSDTNMRLLQSYMDYASNIRHEKLQRS-EVLKHHLEFSGKENNCISGSCCG-------N 684

Query: 281  NQDKV---TEKIKS------GALVDSTSPDRSETVPLLNAEVVMNVNLLKD-PRKASSRL 132
            N++ V   TE ++       G + +S    RS+  PLL  +VVM +NL+ + P+K+   +
Sbjct: 685  NKESVALSTENLEQRPNGVLGVMGNSNFTVRSDEFPLLTKDVVMRMNLVNERPKKSCGLV 744

Query: 131  FTNTVLPSRHLIFIISXXXXXXXXXXXVLHPRKVGEIAITIRR 3
            F+N VL  R   ++I+           VLHP KV ++A++IRR
Sbjct: 745  FSNRVLKYRPSFYVIALIAVCFGVCAIVLHPHKVSKLAVSIRR 787


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