BLASTX nr result

ID: Panax21_contig00029064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029064
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   202   2e-50
ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   202   2e-50
ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   201   4e-50
ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   199   2e-49
ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   197   6e-49

>ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 380

 Score =  202 bits (514), Expect = 2e-50
 Identities = 106/155 (68%), Positives = 119/155 (76%), Gaps = 1/155 (0%)
 Frame = +3

Query: 3   YWCYRCSRFVRVWSQEDSFSCPDCNGGFVEEIETPTRSA-LSDSRRRRFPAAAMYMVGNG 179
           YWC+RCS FVRV S +DS  CPDCN GFVE+IE P+R   +  + RRRFPAAAMYM+GN 
Sbjct: 7   YWCHRCSHFVRV-SNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAAAMYMIGNR 65

Query: 180 SNSDRGSSPALRRSRRNGGDRSPFNPVIVLRGTADYGASEPAAVAGEDGGGFELYYDDGA 359
           SNS +     LRRSRRNGGDRSPFNPVIVLRG +D       + AGE    FELYYDDG 
Sbjct: 66  SNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSD------GSEAGE-SRRFELYYDDGG 118

Query: 360 GSGLRPLPASMSEFLLGSGFDRVLDQLSQIEANGL 464
           GSGLRPLP SMSEFLLGSGFDR+L+QLSQIE NG+
Sbjct: 119 GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGI 153


>ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 383

 Score =  202 bits (514), Expect = 2e-50
 Identities = 106/155 (68%), Positives = 119/155 (76%), Gaps = 1/155 (0%)
 Frame = +3

Query: 3   YWCYRCSRFVRVWSQEDSFSCPDCNGGFVEEIETPTRSA-LSDSRRRRFPAAAMYMVGNG 179
           YWC+RCS FVRV S +DS  CPDCN GFVE+IE P+R   +  + RRRFPAAAMYM+GN 
Sbjct: 10  YWCHRCSHFVRV-SNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAAAMYMIGNR 68

Query: 180 SNSDRGSSPALRRSRRNGGDRSPFNPVIVLRGTADYGASEPAAVAGEDGGGFELYYDDGA 359
           SNS +     LRRSRRNGGDRSPFNPVIVLRG +D       + AGE    FELYYDDG 
Sbjct: 69  SNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSD------GSEAGE-SRRFELYYDDGG 121

Query: 360 GSGLRPLPASMSEFLLGSGFDRVLDQLSQIEANGL 464
           GSGLRPLP SMSEFLLGSGFDR+L+QLSQIE NG+
Sbjct: 122 GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGI 156


>ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 393

 Score =  201 bits (512), Expect = 4e-50
 Identities = 102/156 (65%), Positives = 117/156 (75%), Gaps = 2/156 (1%)
 Frame = +3

Query: 3   YWCYRCSRFVRVWSQEDSFSCPDCNGGFVEEIETPTRSALSDSRRRR--FPAAAMYMVGN 176
           YWCYRCSRFVRVW    +  CPDC+GGF+EEIE P RS   D RR R  FPAAAMYM+G 
Sbjct: 10  YWCYRCSRFVRVWPHH-TVVCPDCDGGFIEEIEHPPRSVHLDPRRHRHRFPAAAMYMIGQ 68

Query: 177 GSNSDRGSSPALRRSRRNGGDRSPFNPVIVLRGTADYGASEPAAVAGEDGGGFELYYDDG 356
             +SD   + +LRR+RRNGGDRSPFNPVIVLRG A+           ++  GFEL+YDDG
Sbjct: 69  RPSSDPRPASSLRRTRRNGGDRSPFNPVIVLRGGAE-----------DESRGFELFYDDG 117

Query: 357 AGSGLRPLPASMSEFLLGSGFDRVLDQLSQIEANGL 464
            GSGLRPLP SMSEFLLGSGFDR+L+QLSQIE NG+
Sbjct: 118 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEINGI 153


>ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 361

 Score =  199 bits (506), Expect = 2e-49
 Identities = 101/154 (65%), Positives = 115/154 (74%)
 Frame = +3

Query: 3   YWCYRCSRFVRVWSQEDSFSCPDCNGGFVEEIETPTRSALSDSRRRRFPAAAMYMVGNGS 182
           YWCY C+RFVRVWS  D+  CPDC+GGF+EEIE   R      R  RFPAAAMYM+ N  
Sbjct: 3   YWCYSCNRFVRVWSH-DAIVCPDCDGGFLEEIEEQPR------RPHRFPAAAMYMIENRP 55

Query: 183 NSDRGSSPALRRSRRNGGDRSPFNPVIVLRGTADYGASEPAAVAGEDGGGFELYYDDGAG 362
           NS + S  A+RR RR  GDRSPFNPVIV+RGTAD G  E     G D G F+LYYDDG G
Sbjct: 56  NSAQNSHSAVRRIRRGRGDRSPFNPVIVMRGTADEGGGE-----GGDRGAFDLYYDDGGG 110

Query: 363 SGLRPLPASMSEFLLGSGFDRVLDQLSQIEANGL 464
           SGLRPLPAS+SEFLLGSGFDR+L+QLSQ+E NG+
Sbjct: 111 SGLRPLPASVSEFLLGSGFDRLLEQLSQMEINGI 144


>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score =  197 bits (502), Expect = 6e-49
 Identities = 101/154 (65%), Positives = 118/154 (76%), Gaps = 1/154 (0%)
 Frame = +3

Query: 3   YWCYRCSRFVRVWSQEDSFSCPDCNGGFVEEIETPTRSALSDSRRRRFPAAAMYMVGNGS 182
           YWC+RC+RFVRVW+Q DS  CP C  GF+EEIE   RS   ++  RRFPA AMYM+GN  
Sbjct: 9   YWCHRCTRFVRVWAQ-DSIVCPYCESGFLEEIEATPRS---ENHHRRFPATAMYMLGNNR 64

Query: 183 -NSDRGSSPALRRSRRNGGDRSPFNPVIVLRGTADYGASEPAAVAGEDGGGFELYYDDGA 359
            +S++ ++  LRRSRRN GDRSPFNPVIVLRG AD G  E   V   +   FELYYDDGA
Sbjct: 65  PDSEQSANLGLRRSRRNAGDRSPFNPVIVLRGPADGGGGEGGVV---ERSSFELYYDDGA 121

Query: 360 GSGLRPLPASMSEFLLGSGFDRVLDQLSQIEANG 461
           GSGLRPLPA+MSEFL+GSGFDR+L+QLSQIE NG
Sbjct: 122 GSGLRPLPATMSEFLMGSGFDRLLEQLSQIEING 155


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