BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029058
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001772966.1| predicted protein [Physcomitrella patens sub...   109   3e-22
dbj|BAF98996.1| nucleoporin 98 [Daucus carota]                         98   1e-18
ref|XP_002886669.1| hypothetical protein ARALYDRAFT_315354 [Arab...    88   1e-15
gb|AAF79770.1|AC009317_29 T30E16.24 [Arabidopsis thaliana]             87   2e-15
ref|NP_172510.2| Nucleoporin autopeptidase [Arabidopsis thaliana...    82   1e-13

>ref|XP_001772966.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162675699|gb|EDQ62191.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 185

 Score =  109 bits (273), Expect = 3e-22
 Identities = 87/175 (49%), Positives = 95/175 (54%), Gaps = 4/175 (2%)
 Frame = -2

Query: 514 LGLPNVGVVAWAPNEE-L*APN-GEEEAPNGLLPNAEED*PNACVDPKLKEG-LEVPKAR 344
           L  PN GV+  APN   L APN G  EAPN  +  A    PNA V      G LE P A 
Sbjct: 29  LDTPNAGVLE-APNAGVLEAPNAGVLEAPNAGVLEA----PNAGVLEAPNAGVLEAPNAG 83

Query: 343 LVEAPNAGVLEAPNAGVLGAPNAGVLEXXXXXXXXXXXXXXXXXXXXGLLDPKTGELETP 164
           ++EAPNAGVLEAPNAGVL APNAGVLE                     L  P  G LE P
Sbjct: 84  VLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAGV---------------LEAPNAGVLEAP 128

Query: 163 NAFTVLL-NVGLAAEPKAGVLVAPKAGVLVAQKAAVLDEPNAGVLGALNAD*LDA 2
           NA  +   N G+   P AGVL AP AGVL A  A VL+ PNAGVL A NA  L+A
Sbjct: 129 NAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEA 183



 Score =  101 bits (252), Expect = 9e-20
 Identities = 65/129 (50%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
 Frame = -2

Query: 382 PKLKEGLEVPKARLVEAPNAGVLEAPNAGVLGAPNAGVLEXXXXXXXXXXXXXXXXXXXX 203
           P +   L+ P A ++EAPNAGVLEAPNAGVL APNAGVLE                    
Sbjct: 23  PDVLGALDTPNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNA 82

Query: 202 GLLD-PKTGELETPNAFTV-LLNVGLAAEPKAGVLVAPKAGVLVAQKAAVLDEPNAGVLG 29
           G+L+ P  G LE PNA  +   N G+   P AGVL AP AGVL A  A VL+ PNAGVL 
Sbjct: 83  GVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAGVLE 142

Query: 28  ALNAD*LDA 2
           A NA  L+A
Sbjct: 143 APNAGVLEA 151



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 71/148 (47%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
 Frame = -2

Query: 514 LGLPNVGVVAWAPNEE-L*APN-GEEEAPN-GLL--PNAEE-D*PNACVDPKLKEG-LEV 356
           L  PN GV+  APN   L APN G  EAPN G+L  PNA   + PNA V      G LE 
Sbjct: 69  LEAPNAGVLE-APNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEA 127

Query: 355 PKARLVEAPNAGVLEAPNAGVLGAPNAGVLEXXXXXXXXXXXXXXXXXXXXGLLDPKTGE 176
           P A ++EAPNAGVLEAPNAGVL APNAGVLE                        P  G 
Sbjct: 128 PNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEA-----------------------PNAGV 164

Query: 175 LETPNAFTVLLNVGLAAEPKAGVLVAPK 92
           LE PNA       G+   P AGVL APK
Sbjct: 165 LEAPNA-------GVLEAPNAGVLEAPK 185


>dbj|BAF98996.1| nucleoporin 98 [Daucus carota]
          Length = 1005

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 73/205 (35%), Positives = 84/205 (40%), Gaps = 8/205 (3%)
 Frame = +3

Query: 6   SSQSAFSAPSTPXXXXXXXXXXXXXXXXXXGATSTPAFGSAASPTFSSTVNXXXXXXXXX 185
           SSQSAFSAPSTP                  GATS+PAFGS ++PTF ST N         
Sbjct: 156 SSQSAFSAPSTPTFGSSSTPAFGATNTPAFGATSSPAFGSVSTPTFGSTGNAFGVSNAPV 215

Query: 186 XXXXXXXXXXXXXXXXXXXXXXXXXXSSTPAFGAPSTPAFGAS-------STPAFGASTS 344
                                     SS+P+FGA +TP FGAS       STPAFG STS
Sbjct: 216 FGSSSPAFGAASTPAFGATSAPAFGTSSSPSFGASTTPPFGASSPSFSFGSTPAFGQSTS 275

Query: 345 LAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQATTPTFGSPSYGP 524
                                                         Q ++P FGSP +G 
Sbjct: 276 -----------------------AFGSTQFGASPSPFGAPSSTFGAQTSSPAFGSPGFGS 312

Query: 525 SAVGG-LGGSRVAAYTPTAEVDSGS 596
           S  GG  GGSRVAAYTPTAE D+G+
Sbjct: 313 STFGGQRGGSRVAAYTPTAEADAGT 337


>ref|XP_002886669.1| hypothetical protein ARALYDRAFT_315354 [Arabidopsis lyrata subsp.
           lyrata] gi|297332510|gb|EFH62928.1| hypothetical protein
           ARALYDRAFT_315354 [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 66/148 (44%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
 Frame = -2

Query: 460 APNGEEEAPNGLLPNAEED*PNACVDPKLKEG-LEVPKARLVEAPNAGVLEAPNAGVLGA 284
           AP  +   P  LLPNAE D P A  +PKLK+G L+ PKA       AGVL+APNAGVL A
Sbjct: 26  APKVDCVEPKELLPNAEVDCPKAGEEPKLKDGVLDAPKA------GAGVLDAPNAGVLDA 79

Query: 283 PNAGVLEXXXXXXXXXXXXXXXXXXXXGLLDPKTGELETPNAFTVLLNVGLAAEPKAGVL 104
           P A                            PK G  +TPNA       G   EP  GV+
Sbjct: 80  PKAPPELKALLPNALPEL-------------PKAGAGDTPNA-------GELEEPNEGVV 119

Query: 103 VAPKAGVLVAQKAAVLDEPNAGVLGALN 20
            APKAGVL+  KA VLD PN GVL A N
Sbjct: 120 AAPKAGVLLEPKADVLDAPNPGVLVAPN 147


>gb|AAF79770.1|AC009317_29 T30E16.24 [Arabidopsis thaliana]
          Length = 217

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 66/188 (35%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
 Frame = -2

Query: 484 WAPNEEL*APNGEEEAPNGLLPNAEED*PNACVDPKLKEG-LEVPKARLVEAPNAGVLE- 311
           WAP  +   P  +   P  LLPNAE D P A  +PKLK+G L+ PKA +++APN GVL+ 
Sbjct: 25  WAPKGDGVEPKEDCVEPKELLPNAEVDCPKAGEEPKLKDGELDAPKAEVLDAPNVGVLDE 84

Query: 310 -------------------------APNAGVLGAPNAGVLEXXXXXXXXXXXXXXXXXXX 206
                                    APNAG L  PN GVLE                   
Sbjct: 85  PKAPPELKVLLPNALPELPKAGAGDAPNAGELEEPNKGVLEAPKAGV------------- 131

Query: 205 XGLLDPKTGELETPNAFTVLLNVGLAAEPKAGVLVAPKAGVLVAQKAAVLDEPNAGVLGA 26
              ++PK G L+ PN        G+   P   V VAP  GV VA    V + P AGVL A
Sbjct: 132 --FVEPKAGVLDAPNP-------GVLLPPNPVVFVAPNPGVFVAPNPEVFETPKAGVLEA 182

Query: 25  LNAD*LDA 2
             A  ++A
Sbjct: 183 PKAGVVEA 190


>ref|NP_172510.2| Nucleoporin autopeptidase [Arabidopsis thaliana]
           gi|79317517|ref|NP_001031018.1| Nucleoporin
           autopeptidase [Arabidopsis thaliana]
           gi|19310423|gb|AAL84948.1| At1g10390/F14N23_29
           [Arabidopsis thaliana] gi|27764948|gb|AAO23595.1|
           At1g10390/F14N23_29 [Arabidopsis thaliana]
           gi|110742211|dbj|BAE99032.1| hypothetical protein
           [Arabidopsis thaliana] gi|332190453|gb|AEE28574.1|
           Nucleoporin autopeptidase [Arabidopsis thaliana]
           gi|332190454|gb|AEE28575.1| Nucleoporin autopeptidase
           [Arabidopsis thaliana]
          Length = 1041

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 64/202 (31%), Positives = 76/202 (37%), Gaps = 4/202 (1%)
 Frame = +3

Query: 3   ASSQSAFSAPSTPXXXXXXXXXXXXXXXXXXGATSTPAFGSAASPTFSSTVNXXXXXXXX 182
           A+S  +F A STP                  GAT+TPAFG++ +P F ST          
Sbjct: 164 ATSTPSFGASSTPAFGATNTPAFGASNSPSFGATNTPAFGASPTPAFGST----GTTFGN 219

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXSSTPAFGAPSTPAFGASSTPAFGASTSLA---X 353
                                      S TPAFGA STPAFGASSTPAFGAS++ A    
Sbjct: 220 TGFGSGGAFGASNTPAFGASGTPAFGASGTPAFGASSTPAFGASSTPAFGASSTPAFGGS 279

Query: 354 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQATTPTFGSPSYGPSAV 533
                                                      QA+TPTFG   +G S  
Sbjct: 280 STPSFGASNTSSFSFGSSPAFGQSTSAFGSSAFGSTPSPFGGAQASTPTFGGSGFGQSTF 339

Query: 534 GG-LGGSRVAAYTPTAEVDSGS 596
           GG  GGSR   Y PT E D+G+
Sbjct: 340 GGQQGGSRAVPYAPTVEADTGT 361