BLASTX nr result

ID: Panax21_contig00029037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029037
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37733.3| unnamed protein product [Vitis vinifera]              239   3e-61
ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vin...   239   3e-61
emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera]   239   3e-61
ref|XP_002313575.1| glutamate-gated kainate-type ion channel rec...   238   5e-61
ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinu...   235   3e-60

>emb|CBI37733.3| unnamed protein product [Vitis vinifera]
          Length = 1147

 Score =  239 bits (609), Expect = 3e-61
 Identities = 110/157 (70%), Positives = 136/157 (86%)
 Frame = -3

Query: 549  VEGYCIVVFLAALKLLQYQIPHKFIMFGDGNKNPNYNELVTQIAANVFDAAVGDIAIITN 370
            + GYCI VF AA+ LL Y +P+KF++FGDG +NPNYN+LV ++A+N FDAAVGDIAI+TN
Sbjct: 715  LHGYCIDVFTAAIALLPYAVPYKFVLFGDGLENPNYNQLVYKVASNDFDAAVGDIAIVTN 774

Query: 369  RIRIVDFTQPHIESGIVVVVPVKRLYSSAWAFL*PFTPLMWGITAALFLIVGVVVWILEH 190
            R + VDFTQP+IESG+VVV PVK+L SSAWAFL PF+PLMWGITA+ FLIVG VVWILEH
Sbjct: 775  RTKAVDFTQPYIESGLVVVAPVKKLNSSAWAFLKPFSPLMWGITASFFLIVGAVVWILEH 834

Query: 189  KRNDEFRGPPKKQLVTILWFSFSTIFFAHSKYPLRSL 79
            + ND+FRGPPKKQ+VT+LWFSFST+FF+H +  + SL
Sbjct: 835  RINDDFRGPPKKQIVTMLWFSFSTLFFSHRENTVSSL 871


>ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vinifera]
          Length = 917

 Score =  239 bits (609), Expect = 3e-61
 Identities = 110/157 (70%), Positives = 136/157 (86%)
 Frame = -3

Query: 549 VEGYCIVVFLAALKLLQYQIPHKFIMFGDGNKNPNYNELVTQIAANVFDAAVGDIAIITN 370
           + GYCI VF AA+ LL Y +P+KF++FGDG +NPNYN+LV ++A+N FDAAVGDIAI+TN
Sbjct: 485 LHGYCIDVFTAAIALLPYAVPYKFVLFGDGLENPNYNQLVYKVASNDFDAAVGDIAIVTN 544

Query: 369 RIRIVDFTQPHIESGIVVVVPVKRLYSSAWAFL*PFTPLMWGITAALFLIVGVVVWILEH 190
           R + VDFTQP+IESG+VVV PVK+L SSAWAFL PF+PLMWGITA+ FLIVG VVWILEH
Sbjct: 545 RTKAVDFTQPYIESGLVVVAPVKKLNSSAWAFLKPFSPLMWGITASFFLIVGAVVWILEH 604

Query: 189 KRNDEFRGPPKKQLVTILWFSFSTIFFAHSKYPLRSL 79
           + ND+FRGPPKKQ+VT+LWFSFST+FF+H +  + SL
Sbjct: 605 RINDDFRGPPKKQIVTMLWFSFSTLFFSHRENTVSSL 641


>emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera]
          Length = 959

 Score =  239 bits (609), Expect = 3e-61
 Identities = 110/157 (70%), Positives = 136/157 (86%)
 Frame = -3

Query: 549 VEGYCIVVFLAALKLLQYQIPHKFIMFGDGNKNPNYNELVTQIAANVFDAAVGDIAIITN 370
           + GYCI VF AA+ LL Y +P+KF++FGDG +NPNYN+LV ++A+N FDAAVGDIAI+TN
Sbjct: 527 LHGYCIDVFTAAIALLPYAVPYKFVLFGDGLENPNYNQLVYKVASNDFDAAVGDIAIVTN 586

Query: 369 RIRIVDFTQPHIESGIVVVVPVKRLYSSAWAFL*PFTPLMWGITAALFLIVGVVVWILEH 190
           R + VDFTQP+IESG+VVV PVK+L SSAWAFL PF+PLMWGITA+ FLIVG VVWILEH
Sbjct: 587 RTKAVDFTQPYIESGLVVVAPVKKLNSSAWAFLKPFSPLMWGITASFFLIVGAVVWILEH 646

Query: 189 KRNDEFRGPPKKQLVTILWFSFSTIFFAHSKYPLRSL 79
           + ND+FRGPPKKQ+VT+LWFSFST+FF+H +  + SL
Sbjct: 647 RINDDFRGPPKKQIVTMLWFSFSTLFFSHRENTVSSL 683


>ref|XP_002313575.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222849983|gb|EEE87530.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 900

 Score =  238 bits (607), Expect = 5e-61
 Identities = 110/158 (69%), Positives = 133/158 (84%)
 Frame = -3

Query: 552 MVEGYCIVVFLAALKLLQYQIPHKFIMFGDGNKNPNYNELVTQIAANVFDAAVGDIAIIT 373
           MV+GYCI VFLAA+KLL Y +PHKFI FGDG+KNP Y +LV +I   VFDA +GD+AI+T
Sbjct: 485 MVQGYCIDVFLAAIKLLPYAVPHKFIPFGDGHKNPTYYDLVYKITTRVFDAVIGDVAIVT 544

Query: 372 NRIRIVDFTQPHIESGIVVVVPVKRLYSSAWAFL*PFTPLMWGITAALFLIVGVVVWILE 193
           NR +IVDFTQP+IESG+VVV PVK+  S+AWAFL PF+PLMW +TA  FLIVG VVWILE
Sbjct: 545 NRTKIVDFTQPYIESGLVVVAPVKKRNSNAWAFLRPFSPLMWAVTAMFFLIVGAVVWILE 604

Query: 192 HKRNDEFRGPPKKQLVTILWFSFSTIFFAHSKYPLRSL 79
           H+ NDEFRGPP+KQLVTILWFSFST+FF+H +  + +L
Sbjct: 605 HRINDEFRGPPRKQLVTILWFSFSTLFFSHRENTVSTL 642


>ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinus communis]
           gi|223540205|gb|EEF41779.1| glutamate receptor 3 plant,
           putative [Ricinus communis]
          Length = 924

 Score =  235 bits (600), Expect = 3e-60
 Identities = 108/157 (68%), Positives = 132/157 (84%)
 Frame = -3

Query: 549 VEGYCIVVFLAALKLLQYQIPHKFIMFGDGNKNPNYNELVTQIAANVFDAAVGDIAIITN 370
           V+GYCI VFLAA+KLL Y +P+KFI FGDG+KNP+Y+ELV +I   VFD  +GDIAI+TN
Sbjct: 485 VQGYCIDVFLAAIKLLPYAVPYKFIPFGDGHKNPSYSELVNRITVGVFDGVIGDIAIVTN 544

Query: 369 RIRIVDFTQPHIESGIVVVVPVKRLYSSAWAFL*PFTPLMWGITAALFLIVGVVVWILEH 190
           R R+VDFTQP+IESG+VVV PVK+L S+ WAFL PFTP MW +TA  FL+VG VVWILEH
Sbjct: 545 RTRVVDFTQPYIESGLVVVAPVKKLNSNEWAFLRPFTPWMWAVTAIFFLLVGAVVWILEH 604

Query: 189 KRNDEFRGPPKKQLVTILWFSFSTIFFAHSKYPLRSL 79
           + NDEFRGPP+KQ+VTILWFSFST+FFAH +  + +L
Sbjct: 605 RINDEFRGPPRKQVVTILWFSFSTMFFAHRENTVSTL 641


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