BLASTX nr result

ID: Panax21_contig00029026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029026
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317579.1| predicted protein [Populus trichocarpa] gi|2...   379   e-103
ref|XP_002319813.1| predicted protein [Populus trichocarpa] gi|2...   373   e-101
ref|XP_004152917.1| PREDICTED: GTPase-activating protein gyp7-li...   363   2e-98
ref|XP_003540414.1| PREDICTED: TBC1 domain family member 15-like...   362   4e-98
ref|NP_001031730.1| RabGAP/TBC domain-containing protein [Arabid...   361   9e-98

>ref|XP_002317579.1| predicted protein [Populus trichocarpa] gi|222860644|gb|EEE98191.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score =  379 bits (974), Expect = e-103
 Identities = 186/271 (68%), Positives = 208/271 (76%), Gaps = 20/271 (7%)
 Frame = -2

Query: 753 MWRDPGLPTDSYYQVRPECTDVPKTKFKIKAGKTLSVRKWQAAFSPEGQLDIGKTLSRIH 574
           MWRDPG P DSYYQVRPECTDVPK+KFKIKAG+TLS RKWQAAF+PEG LDI KTLSRI+
Sbjct: 1   MWRDPGQPADSYYQVRPECTDVPKSKFKIKAGRTLSSRKWQAAFTPEGYLDISKTLSRIY 60

Query: 573 RGGVHPLIRGEVWEFLLGCFDTTSTFDEXXXXXXXXXXXXXQLKDECCQIFPMVGSGRFI 394
           RGG+HP IRGEVWEFLLGC+D  STFDE             + K+EC QIFP+VGSG+FI
Sbjct: 61  RGGIHPSIRGEVWEFLLGCYDPKSTFDERDQIRQRRRVQYVRWKEECRQIFPVVGSGKFI 120

Query: 393 TAPVITEDGKPIHDPIVLQEAKH----------------HV----QEKEASHISETLREA 274
           TAPVITEDG+PI +P+V+ E                   H     Q +  +  SE ++E 
Sbjct: 121 TAPVITEDGQPIQEPLVILETNQDRGPSQDGNSAEIGSSHAYATNQSRTNASCSEMVKEL 180

Query: 273 DTDGPQDEKIIQWKLTLHQIGLDVNRTDRTLVFYEKQENLSKLWDILAVYAWFDKDVGYC 94
            + GP D K+IQW LTLHQIGLDV+RTDRTLVFYEKQENLSKLWDILAVYAW D DVGYC
Sbjct: 181 TSHGPLDHKVIQWMLTLHQIGLDVHRTDRTLVFYEKQENLSKLWDILAVYAWIDTDVGYC 240

Query: 93  QGMSDLCSPMIILLEDEADAFWCFERLMRRL 1
           QGMSDLCSPMI+LLEDEADAFWCFERLMRRL
Sbjct: 241 QGMSDLCSPMIMLLEDEADAFWCFERLMRRL 271


>ref|XP_002319813.1| predicted protein [Populus trichocarpa] gi|222858189|gb|EEE95736.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score =  373 bits (957), Expect = e-101
 Identities = 186/268 (69%), Positives = 207/268 (77%), Gaps = 17/268 (6%)
 Frame = -2

Query: 753 MWRDPGLPTDSYYQVRPECTDVPKTKFKIKAGKTLSVRKWQAAFSPEGQLDIGKTLSRIH 574
           MWRDPG P DSYYQVRPECTDVPKT+FKIKAGKTLS RKWQAAF+PEG LDI KTLSRI+
Sbjct: 1   MWRDPGQPADSYYQVRPECTDVPKTRFKIKAGKTLSPRKWQAAFTPEGYLDISKTLSRIY 60

Query: 573 RG--GVHPLIRGEVWEFLLGCFDTTSTFDEXXXXXXXXXXXXXQLKDECCQIFPMVGSGR 400
           RG  G+HP IRGEVWEFLLGC+D  STFDE             + K+EC QIFP+VGSGR
Sbjct: 61  RGASGIHPSIRGEVWEFLLGCYDPKSTFDERDEIRQRRRIQYIRWKEECRQIFPVVGSGR 120

Query: 399 FITAPVITEDGKPIHDPIVLQEAKHHV---------------QEKEASHISETLREADTD 265
           FITAPVITEDG+PI +P+V+ E                    Q +  +  SE +R+  + 
Sbjct: 121 FITAPVITEDGQPIQEPLVILETNQDRGPSAETGNADGNGTNQSRINASCSEMVRDLTSH 180

Query: 264 GPQDEKIIQWKLTLHQIGLDVNRTDRTLVFYEKQENLSKLWDILAVYAWFDKDVGYCQGM 85
           GP D+K+IQW LTLHQIGLDV+RTDRTLVFYEKQENLSKLWDILAVYA  D DVGYCQGM
Sbjct: 181 GPLDQKVIQWLLTLHQIGLDVHRTDRTLVFYEKQENLSKLWDILAVYARIDTDVGYCQGM 240

Query: 84  SDLCSPMIILLEDEADAFWCFERLMRRL 1
           SDLCSPMI+LLEDEADAFWCFERLMRRL
Sbjct: 241 SDLCSPMIMLLEDEADAFWCFERLMRRL 268


>ref|XP_004152917.1| PREDICTED: GTPase-activating protein gyp7-like [Cucumis sativus]
          Length = 444

 Score =  363 bits (933), Expect = 2e-98
 Identities = 180/262 (68%), Positives = 204/262 (77%), Gaps = 11/262 (4%)
 Frame = -2

Query: 753 MWRDPGLPTDSYYQVRPECTDVPKTKFKIKAGKTLSVRKWQAAFSPEGQLDIGKTLSRIH 574
           MW + G P DS+Y+VRPECTDVPKT+FKI+AGKTLSVRKWQAAF+PEGQLDI KTL+RIH
Sbjct: 1   MW-NTGAPADSFYEVRPECTDVPKTRFKIRAGKTLSVRKWQAAFNPEGQLDISKTLNRIH 59

Query: 573 RGGVHPLIRGEVWEFLLGCFDTTSTFDEXXXXXXXXXXXXXQLKDECCQIFPMVGSGRFI 394
           RGG+HP IRGEVWEFLLGC+D  STF+E               K++C Q+FP+VGSGR+I
Sbjct: 60  RGGIHPSIRGEVWEFLLGCYDPMSTFEEREAIRQRRRIEYATWKEDCRQMFPVVGSGRYI 119

Query: 393 TAPVITEDGKPIHDPIVLQEAKHHVQEKEASHISETLREADTDGPQ-----------DEK 247
           TAPVITEDG+PIHDP+VL E   +  +  A     +  + + DG +           D K
Sbjct: 120 TAPVITEDGQPIHDPLVLLET--NPDKGPAVPQDTSTADGNPDGSRSTPNNNLETVKDPK 177

Query: 246 IIQWKLTLHQIGLDVNRTDRTLVFYEKQENLSKLWDILAVYAWFDKDVGYCQGMSDLCSP 67
           IIQW LTLHQIGLDV RTDRTLVFYEKQENLSKLWDILAVYAW DKDVGYCQGMSDLCSP
Sbjct: 178 IIQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWDILAVYAWIDKDVGYCQGMSDLCSP 237

Query: 66  MIILLEDEADAFWCFERLMRRL 1
           MI+LLEDE DAFWCFERLMRRL
Sbjct: 238 MIMLLEDEGDAFWCFERLMRRL 259


>ref|XP_003540414.1| PREDICTED: TBC1 domain family member 15-like [Glycine max]
          Length = 422

 Score =  362 bits (930), Expect = 4e-98
 Identities = 175/251 (69%), Positives = 199/251 (79%)
 Frame = -2

Query: 753 MWRDPGLPTDSYYQVRPECTDVPKTKFKIKAGKTLSVRKWQAAFSPEGQLDIGKTLSRIH 574
           MWRDPG+P DS+Y++RPECTDVP T+FKIKAGKTLS RKW AAF+PEG LDIGKTLSRI+
Sbjct: 1   MWRDPGVPADSFYEIRPECTDVPVTRFKIKAGKTLSARKWHAAFTPEGYLDIGKTLSRIY 60

Query: 573 RGGVHPLIRGEVWEFLLGCFDTTSTFDEXXXXXXXXXXXXXQLKDECCQIFPMVGSGRFI 394
           RGGVHP I+GEVWEFLLGC+D  STF+E               K+EC Q+FP+VGSGRF+
Sbjct: 61  RGGVHPSIKGEVWEFLLGCYDPKSTFEERDQIRQRRRMQYATWKEECHQLFPLVGSGRFV 120

Query: 393 TAPVITEDGKPIHDPIVLQEAKHHVQEKEASHISETLREADTDGPQDEKIIQWKLTLHQI 214
           TAPVITEDG+PI DP+VL+E        +A  ++ T          D+ ++QW LTLHQI
Sbjct: 121 TAPVITEDGQPIQDPLVLKETS------QAKGLAVT----------DKTVVQWMLTLHQI 164

Query: 213 GLDVNRTDRTLVFYEKQENLSKLWDILAVYAWFDKDVGYCQGMSDLCSPMIILLEDEADA 34
           GLDV RTDRTLVFYEKQENLSKLWDILAVYAW DKDVGY QGM DLCSPMIILL+DEADA
Sbjct: 165 GLDVVRTDRTLVFYEKQENLSKLWDILAVYAWIDKDVGYGQGMCDLCSPMIILLDDEADA 224

Query: 33  FWCFERLMRRL 1
           FWCFERLMRRL
Sbjct: 225 FWCFERLMRRL 235


>ref|NP_001031730.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana]
           gi|332659901|gb|AEE85301.1| RabGAP/TBC domain-containing
           protein [Arabidopsis thaliana]
          Length = 433

 Score =  361 bits (927), Expect = 9e-98
 Identities = 177/251 (70%), Positives = 196/251 (78%)
 Frame = -2

Query: 753 MWRDPGLPTDSYYQVRPECTDVPKTKFKIKAGKTLSVRKWQAAFSPEGQLDIGKTLSRIH 574
           MW   G P DSYYQVRPECTDVPKT+FKIK GKTLSVRKWQA F  EG L IGKTL RI 
Sbjct: 1   MWGGAGEPADSYYQVRPECTDVPKTRFKIKPGKTLSVRKWQAVFVQEGSLHIGKTLRRIR 60

Query: 573 RGGVHPLIRGEVWEFLLGCFDTTSTFDEXXXXXXXXXXXXXQLKDECCQIFPMVGSGRFI 394
           RGG+HP IRGEVWEFLLGC+D  STF+E               K+EC Q+FP++GSGRF 
Sbjct: 61  RGGIHPSIRGEVWEFLLGCYDPMSTFEEREQIRQRRRLQYASWKEECKQMFPVIGSGRFT 120

Query: 393 TAPVITEDGKPIHDPIVLQEAKHHVQEKEASHISETLREADTDGPQDEKIIQWKLTLHQI 214
           TAPVITE+G+P +DP+VLQE    +     S+ S   +E  + GP D+KIIQW LTLHQI
Sbjct: 121 TAPVITENGQPNYDPLVLQE----INLGTNSNGSVFFKELTSRGPLDKKIIQWLLTLHQI 176

Query: 213 GLDVNRTDRTLVFYEKQENLSKLWDILAVYAWFDKDVGYCQGMSDLCSPMIILLEDEADA 34
           GLDVNRTDR LVFYEK+ENLSKLWDIL+VYAW D DVGYCQGMSDLCSPMIILLEDEADA
Sbjct: 177 GLDVNRTDRALVFYEKKENLSKLWDILSVYAWIDNDVGYCQGMSDLCSPMIILLEDEADA 236

Query: 33  FWCFERLMRRL 1
           FWCFERLMRRL
Sbjct: 237 FWCFERLMRRL 247


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