BLASTX nr result
ID: Panax21_contig00029009
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00029009 (393 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796... 77 1e-12 ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264... 77 2e-12 emb|CBI37915.3| unnamed protein product [Vitis vinifera] 77 2e-12 emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera] 77 2e-12 ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago tr... 72 4e-11 >ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796560 [Glycine max] Length = 1969 Score = 77.0 bits (188), Expect = 1e-12 Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 10/96 (10%) Frame = -2 Query: 260 QIVDFRNGVDSILREQSLCNEDLVVTTFKMLTSAANYQPAFLVAVIACKENTLAQLSEAN 81 +I+D R+ V+ IL EQS NEDL V T + TSAA+YQP+F+VA+ A +ENT LS + Sbjct: 919 EIMDLRHSVNYILLEQSESNEDLFVATVNLFTSAAHYQPSFIVAIFALEENTEGHLSIGD 978 Query: 80 GVKAPKET----------NLVDTVLEYVGRSNDLIK 3 KET +LVD ++ Y+ R++DLIK Sbjct: 979 AKLQKKETSPTTVVSKRSSLVDALMHYIERADDLIK 1014 >ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera] Length = 1983 Score = 76.6 bits (187), Expect = 2e-12 Identities = 46/88 (52%), Positives = 62/88 (70%), Gaps = 3/88 (3%) Frame = -2 Query: 260 QIVDFRNGVDSILREQSLCNEDLVVTTFKMLTSAANYQPAFLVAVIACKENT-LAQ-LSE 87 QI D R+ +D IL +QS NEDL V T K+LTSAA +QPAFLVA+IA K+N L Q ++E Sbjct: 934 QITDLRHSIDKILSDQSSWNEDLFVATVKLLTSAALHQPAFLVAIIAAKDNLGLKQPVNE 993 Query: 86 AN-GVKAPKETNLVDTVLEYVGRSNDLI 6 A+ G + +LVD +L+ + RS+DLI Sbjct: 994 ASFGTLGSVKPSLVDALLQVIERSDDLI 1021 >emb|CBI37915.3| unnamed protein product [Vitis vinifera] Length = 1958 Score = 76.6 bits (187), Expect = 2e-12 Identities = 46/88 (52%), Positives = 62/88 (70%), Gaps = 3/88 (3%) Frame = -2 Query: 260 QIVDFRNGVDSILREQSLCNEDLVVTTFKMLTSAANYQPAFLVAVIACKENT-LAQ-LSE 87 QI D R+ +D IL +QS NEDL V T K+LTSAA +QPAFLVA+IA K+N L Q ++E Sbjct: 957 QITDLRHSIDKILSDQSSWNEDLFVATVKLLTSAALHQPAFLVAIIAAKDNLGLKQPVNE 1016 Query: 86 AN-GVKAPKETNLVDTVLEYVGRSNDLI 6 A+ G + +LVD +L+ + RS+DLI Sbjct: 1017 ASFGTLGSVKPSLVDALLQVIERSDDLI 1044 >emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera] Length = 1391 Score = 76.6 bits (187), Expect = 2e-12 Identities = 46/88 (52%), Positives = 62/88 (70%), Gaps = 3/88 (3%) Frame = -2 Query: 260 QIVDFRNGVDSILREQSLCNEDLVVTTFKMLTSAANYQPAFLVAVIACKENT-LAQ-LSE 87 QI D R+ +D IL +QS NEDL V T K+LTSAA +QPAFLVA+IA K+N L Q ++E Sbjct: 313 QITDLRHSIDKILSDQSSWNEDLFVATVKLLTSAALHQPAFLVAIIAAKDNLGLKQPVNE 372 Query: 86 AN-GVKAPKETNLVDTVLEYVGRSNDLI 6 A+ G + +LVD +L+ + RS+DLI Sbjct: 373 ASFGTLGSVKPSLVDALLQVIERSDDLI 400 >ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago truncatula] gi|355508330|gb|AES89472.1| Nucleoporin NUP188-like protein [Medicago truncatula] Length = 1967 Score = 72.4 bits (176), Expect = 4e-11 Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 10/97 (10%) Frame = -2 Query: 263 WQIVDFRNGVDSILREQSLCNEDLVVTTFKMLTSAANYQPAFLVAVIACKENT--LAQLS 90 W I++ R+ + IL+E+S NEDL+V T +LTSAA+YQP+F+VA++A EN + +S Sbjct: 918 WDIINLRHSMSYILKEKSELNEDLLVATVNLLTSAAHYQPSFIVAILAPGENNEDRSCIS 977 Query: 89 EAN------GVKAP--KETNLVDTVLEYVGRSNDLIK 3 +AN V P K + LVD ++ Y+ R++DLIK Sbjct: 978 DANLQRKETSVVPPVSKGSVLVDALINYIERADDLIK 1014