BLASTX nr result

ID: Panax21_contig00029009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029009
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796...    77   1e-12
ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264...    77   2e-12
emb|CBI37915.3| unnamed protein product [Vitis vinifera]               77   2e-12
emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]    77   2e-12
ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago tr...    72   4e-11

>ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796560 [Glycine max]
          Length = 1969

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 10/96 (10%)
 Frame = -2

Query: 260  QIVDFRNGVDSILREQSLCNEDLVVTTFKMLTSAANYQPAFLVAVIACKENTLAQLSEAN 81
            +I+D R+ V+ IL EQS  NEDL V T  + TSAA+YQP+F+VA+ A +ENT   LS  +
Sbjct: 919  EIMDLRHSVNYILLEQSESNEDLFVATVNLFTSAAHYQPSFIVAIFALEENTEGHLSIGD 978

Query: 80   GVKAPKET----------NLVDTVLEYVGRSNDLIK 3
                 KET          +LVD ++ Y+ R++DLIK
Sbjct: 979  AKLQKKETSPTTVVSKRSSLVDALMHYIERADDLIK 1014


>ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera]
          Length = 1983

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/88 (52%), Positives = 62/88 (70%), Gaps = 3/88 (3%)
 Frame = -2

Query: 260  QIVDFRNGVDSILREQSLCNEDLVVTTFKMLTSAANYQPAFLVAVIACKENT-LAQ-LSE 87
            QI D R+ +D IL +QS  NEDL V T K+LTSAA +QPAFLVA+IA K+N  L Q ++E
Sbjct: 934  QITDLRHSIDKILSDQSSWNEDLFVATVKLLTSAALHQPAFLVAIIAAKDNLGLKQPVNE 993

Query: 86   AN-GVKAPKETNLVDTVLEYVGRSNDLI 6
            A+ G     + +LVD +L+ + RS+DLI
Sbjct: 994  ASFGTLGSVKPSLVDALLQVIERSDDLI 1021


>emb|CBI37915.3| unnamed protein product [Vitis vinifera]
          Length = 1958

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/88 (52%), Positives = 62/88 (70%), Gaps = 3/88 (3%)
 Frame = -2

Query: 260  QIVDFRNGVDSILREQSLCNEDLVVTTFKMLTSAANYQPAFLVAVIACKENT-LAQ-LSE 87
            QI D R+ +D IL +QS  NEDL V T K+LTSAA +QPAFLVA+IA K+N  L Q ++E
Sbjct: 957  QITDLRHSIDKILSDQSSWNEDLFVATVKLLTSAALHQPAFLVAIIAAKDNLGLKQPVNE 1016

Query: 86   AN-GVKAPKETNLVDTVLEYVGRSNDLI 6
            A+ G     + +LVD +L+ + RS+DLI
Sbjct: 1017 ASFGTLGSVKPSLVDALLQVIERSDDLI 1044


>emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]
          Length = 1391

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/88 (52%), Positives = 62/88 (70%), Gaps = 3/88 (3%)
 Frame = -2

Query: 260 QIVDFRNGVDSILREQSLCNEDLVVTTFKMLTSAANYQPAFLVAVIACKENT-LAQ-LSE 87
           QI D R+ +D IL +QS  NEDL V T K+LTSAA +QPAFLVA+IA K+N  L Q ++E
Sbjct: 313 QITDLRHSIDKILSDQSSWNEDLFVATVKLLTSAALHQPAFLVAIIAAKDNLGLKQPVNE 372

Query: 86  AN-GVKAPKETNLVDTVLEYVGRSNDLI 6
           A+ G     + +LVD +L+ + RS+DLI
Sbjct: 373 ASFGTLGSVKPSLVDALLQVIERSDDLI 400


>ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago truncatula]
            gi|355508330|gb|AES89472.1| Nucleoporin NUP188-like
            protein [Medicago truncatula]
          Length = 1967

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 10/97 (10%)
 Frame = -2

Query: 263  WQIVDFRNGVDSILREQSLCNEDLVVTTFKMLTSAANYQPAFLVAVIACKENT--LAQLS 90
            W I++ R+ +  IL+E+S  NEDL+V T  +LTSAA+YQP+F+VA++A  EN    + +S
Sbjct: 918  WDIINLRHSMSYILKEKSELNEDLLVATVNLLTSAAHYQPSFIVAILAPGENNEDRSCIS 977

Query: 89   EAN------GVKAP--KETNLVDTVLEYVGRSNDLIK 3
            +AN       V  P  K + LVD ++ Y+ R++DLIK
Sbjct: 978  DANLQRKETSVVPPVSKGSVLVDALINYIERADDLIK 1014


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