BLASTX nr result

ID: Panax21_contig00028988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028988
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26223.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002281606.1| PREDICTED: chloride channel protein CLC-d [V...   140   1e-31
ref|XP_003539246.1| PREDICTED: chloride channel protein CLC-d-li...   135   3e-30
ref|XP_003517583.1| PREDICTED: chloride channel protein CLC-d-li...   133   2e-29
ref|XP_002315783.1| Cl-channel clc-7 [Populus trichocarpa] gi|22...   133   2e-29

>emb|CBI26223.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/91 (71%), Positives = 74/91 (81%)
 Frame = -2

Query: 482 TLYITRWRRNYLHKKGSRVKVIEVCLVSMITSAISFGLPLFRKCSPCPEADVNSGIECPR 303
           T+YIT WRRNYLHKKGSRVK+IEVCLVS+ITS ISFGLPL RKCSPCPE ++NSGIECPR
Sbjct: 339 TIYITYWRRNYLHKKGSRVKMIEVCLVSLITSVISFGLPLLRKCSPCPEVELNSGIECPR 398

Query: 302 PPGMYGNYVNLHSHKLDFTHTQKTTFGEFKD 210
           PPGMYGNYVN +  K +  +   T F   +D
Sbjct: 399 PPGMYGNYVNFYCDKDNEYNDLATIFFNTQD 429


>ref|XP_002281606.1| PREDICTED: chloride channel protein CLC-d [Vitis vinifera]
           gi|301318138|gb|ADK66984.1| chloride channel ClC6 [Vitis
           vinifera]
          Length = 771

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/91 (71%), Positives = 74/91 (81%)
 Frame = -2

Query: 482 TLYITRWRRNYLHKKGSRVKVIEVCLVSMITSAISFGLPLFRKCSPCPEADVNSGIECPR 303
           T+YIT WRRNYLHKKGSRVK+IEVCLVS+ITS ISFGLPL RKCSPCPE ++NSGIECPR
Sbjct: 339 TIYITYWRRNYLHKKGSRVKMIEVCLVSLITSVISFGLPLLRKCSPCPEVELNSGIECPR 398

Query: 302 PPGMYGNYVNLHSHKLDFTHTQKTTFGEFKD 210
           PPGMYGNYVN +  K +  +   T F   +D
Sbjct: 399 PPGMYGNYVNFYCDKDNEYNDLATIFFNTQD 429


>ref|XP_003539246.1| PREDICTED: chloride channel protein CLC-d-like [Glycine max]
          Length = 774

 Score =  135 bits (340), Expect = 3e-30
 Identities = 60/75 (80%), Positives = 67/75 (89%)
 Frame = -2

Query: 482 TLYITRWRRNYLHKKGSRVKVIEVCLVSMITSAISFGLPLFRKCSPCPEADVNSGIECPR 303
           TLYIT WRRN+LHKKGSRVK+IE CLVS++TSAISFGLPL RKCSPCP++D+ SGIECPR
Sbjct: 341 TLYITTWRRNHLHKKGSRVKIIEACLVSILTSAISFGLPLLRKCSPCPDSDLASGIECPR 400

Query: 302 PPGMYGNYVNLHSHK 258
           PPGMYGNYVN    K
Sbjct: 401 PPGMYGNYVNFFCSK 415


>ref|XP_003517583.1| PREDICTED: chloride channel protein CLC-d-like [Glycine max]
          Length = 801

 Score =  133 bits (334), Expect = 2e-29
 Identities = 59/75 (78%), Positives = 66/75 (88%)
 Frame = -2

Query: 482 TLYITRWRRNYLHKKGSRVKVIEVCLVSMITSAISFGLPLFRKCSPCPEADVNSGIECPR 303
           TLYIT WRRN+LHKKG+RVK+IE CLVS++TSAISFGLPL RKCSPCP++D  SGIECPR
Sbjct: 341 TLYITTWRRNHLHKKGNRVKIIEACLVSILTSAISFGLPLLRKCSPCPDSDPASGIECPR 400

Query: 302 PPGMYGNYVNLHSHK 258
           PPGMYGNYVN    K
Sbjct: 401 PPGMYGNYVNFFCSK 415


>ref|XP_002315783.1| Cl-channel clc-7 [Populus trichocarpa] gi|222864823|gb|EEF01954.1|
           Cl-channel clc-7 [Populus trichocarpa]
          Length = 752

 Score =  133 bits (334), Expect = 2e-29
 Identities = 58/75 (77%), Positives = 67/75 (89%)
 Frame = -2

Query: 482 TLYITRWRRNYLHKKGSRVKVIEVCLVSMITSAISFGLPLFRKCSPCPEADVNSGIECPR 303
           TL+IT WRRNYLHK G+RVK+IE CL+S+ITSAISFGLPL RKC+PCPE+D +SGIECPR
Sbjct: 339 TLHITYWRRNYLHKNGNRVKIIEACLISVITSAISFGLPLLRKCNPCPESDPDSGIECPR 398

Query: 302 PPGMYGNYVNLHSHK 258
           PPGMYGNYVN +  K
Sbjct: 399 PPGMYGNYVNFYCGK 413


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