BLASTX nr result

ID: Panax21_contig00028986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028986
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD29679.1|AF133209_1 CLC-Nt2 protein [Nicotiana tabacum]           79   5e-13
ref|XP_002509531.1| chloride channel clc, putative [Ricinus comm...    74   9e-12
ref|XP_002300101.1| Cl-channel clc-7 [Populus trichocarpa] gi|22...    74   1e-11
ref|NP_001236494.1| chloride channel [Glycine max] gi|66220164|g...    72   5e-11
ref|XP_004138613.1| PREDICTED: chloride channel protein CLC-b-li...    69   3e-10

>gb|AAD29679.1|AF133209_1 CLC-Nt2 protein [Nicotiana tabacum]
          Length = 786

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/64 (68%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
 Frame = -1

Query: 185 EEPT---QPAIHYVEEGQQADHLEERDPESNSLHRPLLKRNLTLSSTPLAMVGAKVSHIE 15
           EEPT   + A     +GQQ +  EERDPESNSLH+PLLKRN TLSS+P A+VGAKVSHIE
Sbjct: 2   EEPTRLVEEATINNMDGQQNE--EERDPESNSLHQPLLKRNRTLSSSPFALVGAKVSHIE 59

Query: 14  SLDY 3
           SLDY
Sbjct: 60  SLDY 63


>ref|XP_002509531.1| chloride channel clc, putative [Ricinus communis]
           gi|223549430|gb|EEF50918.1| chloride channel clc,
           putative [Ricinus communis]
          Length = 787

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 5/68 (7%)
 Frame = -1

Query: 191 MEEEPTQPAI-----HYVEEGQQADHLEERDPESNSLHRPLLKRNLTLSSTPLAMVGAKV 27
           MEE+ +Q A      H +E  Q+    EERDPESNSL +PLLKRN TLSS+PLA+VGAKV
Sbjct: 1   MEEDSSQLAEATAPPHTMEASQE----EERDPESNSLQQPLLKRNRTLSSSPLAIVGAKV 56

Query: 26  SHIESLDY 3
           S+IESLDY
Sbjct: 57  SYIESLDY 64


>ref|XP_002300101.1| Cl-channel clc-7 [Populus trichocarpa] gi|222847359|gb|EEE84906.1|
           Cl-channel clc-7 [Populus trichocarpa]
          Length = 785

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = -1

Query: 161 HYVEEGQQADHLEERDPESNSLHRPLLKRNLTLSSTPLAMVGAKVSHIESLDY 3
           H +E G+     E RDPESN+LH+PLLKRN TLSS PLA+VGAKVSHIESLDY
Sbjct: 15  HNLEVGE-----EGRDPESNTLHQPLLKRNRTLSSNPLALVGAKVSHIESLDY 62


>ref|NP_001236494.1| chloride channel [Glycine max] gi|66220164|gb|AAY43007.1| chloride
           channel [Glycine max]
          Length = 783

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/51 (66%), Positives = 41/51 (80%)
 Frame = -1

Query: 155 VEEGQQADHLEERDPESNSLHRPLLKRNLTLSSTPLAMVGAKVSHIESLDY 3
           + +    + +EERDPESN L+ PLLKRN TLSS PLA+VGAKVS+IESLDY
Sbjct: 14  INDTNMVEEVEERDPESNPLNEPLLKRNRTLSSNPLALVGAKVSYIESLDY 64


>ref|XP_004138613.1| PREDICTED: chloride channel protein CLC-b-like [Cucumis sativus]
           gi|449523299|ref|XP_004168661.1| PREDICTED: chloride
           channel protein CLC-b-like [Cucumis sativus]
           gi|386649465|gb|AFJ15538.1| chloride channel a [Cucumis
           sativus]
          Length = 789

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 40/66 (60%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
 Frame = -1

Query: 191 MEEEP---TQPAIHYVEEGQQADHLEERDPESNSLHRPLLKRNLTLSSTPLAMVGAKVSH 21
           M+E P   T+  +    E +  D  EERDPESN L++PLLKRN TLSS+PLA+VGAKVS 
Sbjct: 1   MDENPSFVTESTLTNSMEAEPQD--EERDPESNPLNQPLLKRNRTLSSSPLAIVGAKVSL 58

Query: 20  IESLDY 3
           IESLDY
Sbjct: 59  IESLDY 64


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