BLASTX nr result

ID: Panax21_contig00028982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028982
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280127.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   132   2e-29
ref|XP_003549460.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   131   6e-29
ref|XP_002300711.1| predicted protein [Populus trichocarpa] gi|2...   131   6e-29
ref|XP_003589467.1| tRNA (adenine-N(1)-)-methyltransferase non-c...   130   8e-29
ref|XP_003544392.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   123   1e-26

>ref|XP_002280127.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic
           subunit trm6 [Vitis vinifera]
           gi|302142647|emb|CBI19850.3| unnamed protein product
           [Vitis vinifera]
          Length = 464

 Score =  132 bits (333), Expect = 2e-29
 Identities = 77/152 (50%), Positives = 88/152 (57%), Gaps = 1/152 (0%)
 Frame = +3

Query: 18  TAASP-VVQAYKASKAGEKAPREAIKLWRENGFSSLIIAVPDQDAWTIVKEVXXXXXXXX 194
           TA+ P V +  KA+KAGE A  +AI LW+ENGFSSL+IA P+ D W+IV+E         
Sbjct: 332 TASPPQVAKTCKATKAGENASLDAINLWKENGFSSLLIAAPELDVWSIVQEFLPFLSYSA 391

Query: 195 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLQLGKMAIGLQISEPWLR 374
                                                    NLQLGKMAIGLQISEPWLR
Sbjct: 392 SFAIYHQYLQPLATCMH------------------------NLQLGKMAIGLQISEPWLR 427

Query: 375 EYQVLPSRTHPHMQMSASGGYILTGTRICSTD 470
           EYQVLPSRTHP MQMSA GGYIL+GTRICS+D
Sbjct: 428 EYQVLPSRTHPCMQMSAFGGYILSGTRICSSD 459


>ref|XP_003549460.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic
           subunit trm6-like [Glycine max]
          Length = 440

 Score =  131 bits (329), Expect = 6e-29
 Identities = 72/156 (46%), Positives = 88/156 (56%)
 Frame = +3

Query: 3   SELPETAASPVVQAYKASKAGEKAPREAIKLWRENGFSSLIIAVPDQDAWTIVKEVXXXX 182
           S+L      P  + +KA KAGE+A +E I LW+ENGFSSLIIA P+ D WT+V+++    
Sbjct: 309 SDLGAENTEPAKEVWKAPKAGERAQKEIIDLWKENGFSSLIIAAPELDTWTLVRDILPLL 368

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLQLGKMAIGLQISE 362
                                                        NLQL KMAIGLQI+E
Sbjct: 369 ADSAPFAIYHQYLQPLATCMH------------------------NLQLEKMAIGLQITE 404

Query: 363 PWLREYQVLPSRTHPHMQMSASGGYILTGTRICSTD 470
           PWLREYQVLPSRTHP MQMS+ GGYIL+GT+ICST+
Sbjct: 405 PWLREYQVLPSRTHPCMQMSSFGGYILSGTKICSTE 440


>ref|XP_002300711.1| predicted protein [Populus trichocarpa] gi|222842437|gb|EEE79984.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  131 bits (329), Expect = 6e-29
 Identities = 75/150 (50%), Positives = 84/150 (56%)
 Frame = +3

Query: 18  TAASPVVQAYKASKAGEKAPREAIKLWRENGFSSLIIAVPDQDAWTIVKEVXXXXXXXXX 197
           T  SP  +  K  KAGEKA  EAIK W+ENGFSSLIIA PD DAW++ K++         
Sbjct: 261 TIVSPQSKMGKPPKAGEKASEEAIKSWKENGFSSLIIAAPDADAWSLAKDLLPLLSYSAP 320

Query: 198 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLQLGKMAIGLQISEPWLRE 377
                                                   NLQ GKMAIGLQISEPWLRE
Sbjct: 321 FAIYHQYLQPLATCMH------------------------NLQQGKMAIGLQISEPWLRE 356

Query: 378 YQVLPSRTHPHMQMSASGGYILTGTRICST 467
           YQVLPSRTHP MQMSA GGYIL+GT+ICS+
Sbjct: 357 YQVLPSRTHPLMQMSAFGGYILSGTKICSS 386


>ref|XP_003589467.1| tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit trm6
           [Medicago truncatula] gi|355478515|gb|AES59718.1| tRNA
           (adenine-N(1)-)-methyltransferase non-catalytic subunit
           trm6 [Medicago truncatula]
          Length = 457

 Score =  130 bits (328), Expect = 8e-29
 Identities = 73/151 (48%), Positives = 87/151 (57%)
 Frame = +3

Query: 15  ETAASPVVQAYKASKAGEKAPREAIKLWRENGFSSLIIAVPDQDAWTIVKEVXXXXXXXX 194
           E++  P ++A KA KAGEKA +E I  W+ENGFSSLIIA PD D WT++K++        
Sbjct: 331 ESSTFPALRACKAIKAGEKASQEIIDSWKENGFSSLIIAAPDLDTWTLIKDLLPLLSNSA 390

Query: 195 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLQLGKMAIGLQISEPWLR 374
                                                    NLQL KMAIGLQI+EPWLR
Sbjct: 391 PFAIYHQYLQPLATCMH------------------------NLQLEKMAIGLQITEPWLR 426

Query: 375 EYQVLPSRTHPHMQMSASGGYILTGTRICST 467
           EYQVLPSRTHP MQMSA GGYIL+GT+ICS+
Sbjct: 427 EYQVLPSRTHPCMQMSAFGGYILSGTKICSS 457


>ref|XP_003544392.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic
           subunit trm6-like [Glycine max]
          Length = 423

 Score =  123 bits (309), Expect = 1e-26
 Identities = 69/140 (49%), Positives = 80/140 (57%)
 Frame = +3

Query: 48  KASKAGEKAPREAIKLWRENGFSSLIIAVPDQDAWTIVKEVXXXXXXXXXXXXXXXXXXX 227
           KA KAGE+A +E I LW+ENGFSSLIIA P+ D W +V++V                   
Sbjct: 308 KAPKAGERAHKEIIDLWKENGFSSLIIAAPELDTWALVRDVLPLLANSAPFAIYHQYLQP 367

Query: 228 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLQLGKMAIGLQISEPWLREYQVLPSRTHP 407
                                         NLQL KMAIGLQI+EPWLREYQVLPSRTHP
Sbjct: 368 LATCMH------------------------NLQLEKMAIGLQITEPWLREYQVLPSRTHP 403

Query: 408 HMQMSASGGYILTGTRICST 467
            MQMS+ GGYIL+GT+ICST
Sbjct: 404 CMQMSSFGGYILSGTKICST 423


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