BLASTX nr result

ID: Panax21_contig00028976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028976
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305646.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002316668.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002524699.1| ATATH13, putative [Ricinus communis] gi|2235...    95   7e-18
ref|XP_002892642.1| ABC1 family protein [Arabidopsis lyrata subs...    91   1e-16
ref|XP_002269141.1| PREDICTED: uncharacterized aarF domain-conta...    90   2e-16

>ref|XP_002305646.1| predicted protein [Populus trichocarpa] gi|222848610|gb|EEE86157.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  115 bits (288), Expect = 4e-24
 Identities = 72/170 (42%), Positives = 98/170 (57%), Gaps = 4/170 (2%)
 Frame = +3

Query: 33  MSRFFKIGKIRRVAEXXXXXXXXXXXA---GRRYGEVSTAGLFSPQYKLYSQFMSPCRNQ 203
           + RF  IG I++VA                 ++YG V + GL  PQ++ YSQ+  P R  
Sbjct: 6   VGRFLTIGNIKKVARLIFSKQKSSSNQLLEVKKYGTVVSVGLHLPQFRYYSQYSFPSRGY 65

Query: 204 SSFLAYKMKDVFIKSSYPNNYHVIPESNRIAYHAQVAWKRLSR-GSYNGQTSRPISRLAQ 380
           SSF  Y +K+ F +  + + Y     S+ +  +AQ+AWKRL R GS NG +   ISR+AQ
Sbjct: 66  SSFALYNVKEQFGRRCFTSCYS--STSDVVTRNAQLAWKRLCRKGSANGWSFPRISRIAQ 123

Query: 381 AISLALSRYYGVVPGVFALTCGNVAWAQALENIEICQPSNTLFTRAQDGH 530
           A+SLAL+R + VVP   ALTCG VAWAQ    +E     N+L+ RAQDGH
Sbjct: 124 AVSLALTRSHLVVPSALALTCGQVAWAQR-TLVESDFYPNSLYMRAQDGH 172


>ref|XP_002316668.1| predicted protein [Populus trichocarpa] gi|222859733|gb|EEE97280.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  100 bits (249), Expect = 1e-19
 Identities = 60/139 (43%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
 Frame = +3

Query: 117 RRYGEVSTAGLFSPQYKLYSQFMSPCRNQSSFLAYKMKDVFIKSSYPNNYHVIPESNRIA 296
           + +G V +  L  PQ++ YSQ+  P R  SSF    +K+ F +  +  NY     S+ + 
Sbjct: 12  KEHGTVVSVCLHLPQFRNYSQYSFPSREYSSFALCNIKEQFGRRCFTRNYSFT--SDAVT 69

Query: 297 YHAQVAWKRLSR-GSYNGQTSRPISRLAQAISLALSRYYGVVPGVFALTCGNVAWAQALE 473
           ++AQ+AWKRL R GS +G +   ISR+AQA+SLAL+R   VVP    LTCG VAWAQ   
Sbjct: 70  HNAQLAWKRLFRKGSASGWSFPRISRIAQAVSLALTRSQLVVPSALVLTCGQVAWAQR-T 128

Query: 474 NIEICQPSNTLFTRAQDGH 530
            +E      +L+ RAQDGH
Sbjct: 129 LVEPDYYPGSLYMRAQDGH 147


>ref|XP_002524699.1| ATATH13, putative [Ricinus communis] gi|223536060|gb|EEF37718.1|
           ATATH13, putative [Ricinus communis]
          Length = 603

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 59/138 (42%), Positives = 84/138 (60%), Gaps = 7/138 (5%)
 Frame = +3

Query: 138 TAGLFSPQYKLYS---QFMSPCRNQSSFLAYKMKDVFIKSSYPN--NYHVIPESNRIAYH 302
           T GL  P Y+ Y     + S     SSF +Y +K+ F + SY +  NY V   SN +  H
Sbjct: 64  TVGLHLPLYRYYDGARYWFSSKGGYSSFGSYGVKEHFCRKSYVSSRNYTVFAASNVVTRH 123

Query: 303 AQVAWKRLSR-GSYNGQTSRPISRLAQAISLALSRYYGVVPGVFALTCGNVAWAQ-ALEN 476
           AQ A+KRL R GS + ++   ISR+AQA+SLAL+R + +VPG+FA++ G VAWA+     
Sbjct: 124 AQHAFKRLCRKGSVSHRSFPHISRIAQAVSLALTRSHLLVPGIFAISYGQVAWAERTFSE 183

Query: 477 IEICQPSNTLFTRAQDGH 530
           ++     N+L+ RAQDGH
Sbjct: 184 MDFYPLQNSLYMRAQDGH 201


>ref|XP_002892642.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338484|gb|EFH68901.1| ABC1 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 624

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 54/138 (39%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
 Frame = +3

Query: 123 YGEVSTAGLFSPQYKLYSQFMSPCRNQSSFLAYK-MKDVFIKSSYPNNYHVIPESNRIAY 299
           Y    TA L SPQ++ YS       N    LA++ +K  F+      +Y  +P  N +++
Sbjct: 31  YRTAFTAALRSPQFRTYSSSGRVPSNGYCILAFRDLKGSFLSKHLSRSYSTVPARNVVSH 90

Query: 300 HAQVAWKRLSRGSYNGQTSRPISRLAQAISLALSRYYGVVPGVFALTCGNVAWAQAL--E 473
           HAQVAWKRL     + + S  IS +AQA SL+L+R + ++PG+ ALTCG VAWAQ     
Sbjct: 91  HAQVAWKRL-----HYKYSERISTMAQAFSLSLTRSHLLIPGIVALTCGQVAWAQRAPGS 145

Query: 474 NIEICQPSNTLFTRAQDG 527
            I       +L+TRA++G
Sbjct: 146 GINHYASDKSLYTRAKNG 163


>ref|XP_002269141.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           2-like [Vitis vinifera]
          Length = 579

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 51/112 (45%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
 Frame = +3

Query: 201 QSSFLAYKMKDVFIKSSYPNNYHVIPESNRIAYHAQVAWKRLSR-GSYNGQTSRPISRLA 377
           + + L +  ++   K  Y  N+  +  SN   +HAQVAW+RL    S NG+T  P+ R+A
Sbjct: 6   EGTALGFGTRNSICKHGYSKNFSAVSASNVATHHAQVAWRRLYEIFSCNGKTFPPLGRIA 65

Query: 378 QAISLALSRYYGVVPGVFALTCGNVAWAQ-ALENIEICQPSNTLFTRAQDGH 530
           QA+SLALSR + VVPG+FA T G +A AQ  LE  +     NTL+ RAQDGH
Sbjct: 66  QAVSLALSRSHLVVPGMFAFTFGELALAQRPLEYTDHYPSRNTLYMRAQDGH 117


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