BLASTX nr result

ID: Panax21_contig00028975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028975
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305646.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002316668.1| predicted protein [Populus trichocarpa] gi|2...   101   8e-20
ref|XP_002524699.1| ATATH13, putative [Ricinus communis] gi|2235...    98   9e-19
ref|XP_003543093.1| PREDICTED: uncharacterized aarF domain-conta...    97   1e-18
ref|XP_002269141.1| PREDICTED: uncharacterized aarF domain-conta...    96   3e-18

>ref|XP_002305646.1| predicted protein [Populus trichocarpa] gi|222848610|gb|EEE86157.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  115 bits (288), Expect = 4e-24
 Identities = 71/170 (41%), Positives = 97/170 (57%), Gaps = 4/170 (2%)
 Frame = +3

Query: 33  MSRFFKIGKIRRVAEXXXXXXXXXXXA---GRRYGEVSTAGLFSPQYKLYSQFMSPCKNQ 203
           + RF  IG I++VA                 ++YG V + GL  PQ++ YSQ+  P +  
Sbjct: 6   VGRFLTIGNIKKVARLIFSKQKSSSNQLLEVKKYGTVVSVGLHLPQFRYYSQYSFPSRGY 65

Query: 204 SSFLAYKMKDVFIKSSYPKNYHVIPESNRIAYHAQVAWKRLSR-GSYDGQTSRPINRLAQ 380
           SSF  Y +K+ F +  +   Y     S+ +  +AQ+AWKRL R GS +G +   I+R+AQ
Sbjct: 66  SSFALYNVKEQFGRRCFTSCYS--STSDVVTRNAQLAWKRLCRKGSANGWSFPRISRIAQ 123

Query: 381 AISLALSRYYGVVPGIFALTCGNVAWAQALENTEIFQPSNTLYTRAQDGH 530
           A+SLAL+R + VVP   ALTCG VAWAQ       F P N+LY RAQDGH
Sbjct: 124 AVSLALTRSHLVVPSALALTCGQVAWAQRTLVESDFYP-NSLYMRAQDGH 172


>ref|XP_002316668.1| predicted protein [Populus trichocarpa] gi|222859733|gb|EEE97280.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  101 bits (251), Expect = 8e-20
 Identities = 59/139 (42%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
 Frame = +3

Query: 117 RRYGEVSTAGLFSPQYKLYSQFMSPCKNQSSFLAYKMKDVFIKSSYPKNYHVIPESNRIA 296
           + +G V +  L  PQ++ YSQ+  P +  SSF    +K+ F +  + +NY     S+ + 
Sbjct: 12  KEHGTVVSVCLHLPQFRNYSQYSFPSREYSSFALCNIKEQFGRRCFTRNYSFT--SDAVT 69

Query: 297 YHAQVAWKRLSR-GSYDGQTSRPINRLAQAISLALSRYYGVVPGIFALTCGNVAWAQALE 473
           ++AQ+AWKRL R GS  G +   I+R+AQA+SLAL+R   VVP    LTCG VAWAQ   
Sbjct: 70  HNAQLAWKRLFRKGSASGWSFPRISRIAQAVSLALTRSQLVVPSALVLTCGQVAWAQRTL 129

Query: 474 NTEIFQPSNTLYTRAQDGH 530
               + P  +LY RAQDGH
Sbjct: 130 VEPDYYP-GSLYMRAQDGH 147


>ref|XP_002524699.1| ATATH13, putative [Ricinus communis] gi|223536060|gb|EEF37718.1|
           ATATH13, putative [Ricinus communis]
          Length = 603

 Score = 97.8 bits (242), Expect = 9e-19
 Identities = 62/138 (44%), Positives = 84/138 (60%), Gaps = 7/138 (5%)
 Frame = +3

Query: 138 TAGLFSPQYKLYS---QFMSPCKNQSSFLAYKMKDVFIKSSY--PKNYHVIPESNRIAYH 302
           T GL  P Y+ Y     + S     SSF +Y +K+ F + SY   +NY V   SN +  H
Sbjct: 64  TVGLHLPLYRYYDGARYWFSSKGGYSSFGSYGVKEHFCRKSYVSSRNYTVFAASNVVTRH 123

Query: 303 AQVAWKRLSR-GSYDGQTSRPINRLAQAISLALSRYYGVVPGIFALTCGNVAWAQALENT 479
           AQ A+KRL R GS   ++   I+R+AQA+SLAL+R + +VPGIFA++ G VAWA+   + 
Sbjct: 124 AQHAFKRLCRKGSVSHRSFPHISRIAQAVSLALTRSHLLVPGIFAISYGQVAWAERTFSE 183

Query: 480 EIFQP-SNTLYTRAQDGH 530
             F P  N+LY RAQDGH
Sbjct: 184 MDFYPLQNSLYMRAQDGH 201


>ref|XP_003543093.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           2-like [Glycine max]
          Length = 625

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 58/139 (41%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
 Frame = +3

Query: 126 GEVSTAGLFSPQYKLYSQFMSPCKNQSSFLAYKMKDVFIKSSYPKNYHVIPESNRIAYHA 305
           G V + G      +LY Q+  P +  SSFL +  ++ F K    +N+ V   SN + +H+
Sbjct: 26  GPVVSVGPNIHHCRLYMQYKFPSEACSSFLWHGTREGFRKRGSFRNFSVTSASNTVTHHS 85

Query: 306 QVAWKRLSR---GSYDGQTSRPINRLAQAISLALSRYYGVVPGIFALTCGNVAWAQA-LE 473
           Q+AWKRL R    S DG     +N +AQA+SLAL+R Y +VPGI A TCG +A AQ    
Sbjct: 86  QIAWKRLYRKYCSSGDGTFPPTVNMIAQAVSLALARSYLLVPGILAFTCGELALAQQNWA 145

Query: 474 NTEIFQPSNTLYTRAQDGH 530
           + E +   N LY RAQDG+
Sbjct: 146 DAERYPSQNGLYMRAQDGY 164


>ref|XP_002269141.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           2-like [Vitis vinifera]
          Length = 579

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/112 (47%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
 Frame = +3

Query: 201 QSSFLAYKMKDVFIKSSYPKNYHVIPESNRIAYHAQVAWKRLSR-GSYDGQTSRPINRLA 377
           + + L +  ++   K  Y KN+  +  SN   +HAQVAW+RL    S +G+T  P+ R+A
Sbjct: 6   EGTALGFGTRNSICKHGYSKNFSAVSASNVATHHAQVAWRRLYEIFSCNGKTFPPLGRIA 65

Query: 378 QAISLALSRYYGVVPGIFALTCGNVAWAQ-ALENTEIFQPSNTLYTRAQDGH 530
           QA+SLALSR + VVPG+FA T G +A AQ  LE T+ +   NTLY RAQDGH
Sbjct: 66  QAVSLALSRSHLVVPGMFAFTFGELALAQRPLEYTDHYPSRNTLYMRAQDGH 117


Top