BLASTX nr result

ID: Panax21_contig00028963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028963
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27785.3| unnamed protein product [Vitis vinifera]               73   2e-11
ref|XP_002277706.1| PREDICTED: transmembrane protein 184C-like [...    73   2e-11
ref|XP_002516252.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
ref|XP_003534953.1| PREDICTED: transmembrane protein 184C-like [...    64   1e-08
ref|XP_003595329.1| Transmembrane protein 184C [Medicago truncat...    60   2e-07

>emb|CBI27785.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/82 (50%), Positives = 51/82 (62%)
 Frame = +2

Query: 137 CTLSVLCYCIF*MYLDKLLQQNLFSTIYNLC*GGEERVIELLEDESRKSLNKPLLEGVDE 316
           C +   CY  F +Y         F +    C GGEE VIELLE+ESRK L+KPLLEG DE
Sbjct: 111 CDILRSCYEAFALYS--------FGSYLVACLGGEEVVIELLENESRKQLSKPLLEGEDE 162

Query: 317 QPQLQQRTFWNFFRRPSVLGED 382
           +  LQ+++  NFF RP VLG+D
Sbjct: 163 KQWLQEKSLRNFFMRPCVLGKD 184


>ref|XP_002277706.1| PREDICTED: transmembrane protein 184C-like [Vitis vinifera]
          Length = 432

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/82 (50%), Positives = 51/82 (62%)
 Frame = +2

Query: 137 CTLSVLCYCIF*MYLDKLLQQNLFSTIYNLC*GGEERVIELLEDESRKSLNKPLLEGVDE 316
           C +   CY  F +Y         F +    C GGEE VIELLE+ESRK L+KPLLEG DE
Sbjct: 86  CDILRSCYEAFALYS--------FGSYLVACLGGEEVVIELLENESRKQLSKPLLEGEDE 137

Query: 317 QPQLQQRTFWNFFRRPSVLGED 382
           +  LQ+++  NFF RP VLG+D
Sbjct: 138 KQWLQEKSLRNFFMRPCVLGKD 159


>ref|XP_002516252.1| conserved hypothetical protein [Ricinus communis]
           gi|223544738|gb|EEF46254.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 418

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/86 (41%), Positives = 51/86 (59%)
 Frame = +2

Query: 125 FRCICTLSVLCYCIF*MYLDKLLQQNLFSTIYNLC*GGEERVIELLEDESRKSLNKPLLE 304
           F  +C +   CY  F +Y         F +    C GGE+RVIELLE+E++K L++ LLE
Sbjct: 78  FSLVCDILRNCYEAFALYA--------FGSYLVACLGGEKRVIELLENEAQKRLSQTLLE 129

Query: 305 GVDEQPQLQQRTFWNFFRRPSVLGED 382
            +DE   + QR+F NFF RP ++G D
Sbjct: 130 ELDENQGVHQRSFMNFFCRPYIIGRD 155


>ref|XP_003534953.1| PREDICTED: transmembrane protein 184C-like [Glycine max]
          Length = 396

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = +2

Query: 227 C*GGEERVIELLEDESRKSLNKPLLEGVDEQPQLQQRTFWNFFRRPSVLGED 382
           C GGE +V+E+LEDES + L+K LL+G DE   ++ R+FWNFF  PS LG+D
Sbjct: 104 CLGGEGKVVEVLEDESAEQLSKSLLDGSDENHGIENRSFWNFFWYPSKLGKD 155


>ref|XP_003595329.1| Transmembrane protein 184C [Medicago truncatula]
           gi|355484377|gb|AES65580.1| Transmembrane protein 184C
           [Medicago truncatula]
          Length = 439

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/52 (55%), Positives = 35/52 (67%)
 Frame = +2

Query: 227 C*GGEERVIELLEDESRKSLNKPLLEGVDEQPQLQQRTFWNFFRRPSVLGED 382
           C GGE +V+ELLEDES + L KPLL   DE    +QR+F NFF  P  LG+D
Sbjct: 119 CLGGERKVVELLEDESEEHLEKPLLHDSDENNGTEQRSFCNFFWHPCRLGKD 170


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