BLASTX nr result

ID: Panax21_contig00028962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028962
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316327.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002316325.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002525074.1| hypothetical protein RCOM_0745050 [Ricinus c...    59   5e-07
ref|XP_002311130.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_003535782.1| PREDICTED: uncharacterized protein LOC100817...    55   8e-06

>ref|XP_002316327.1| predicted protein [Populus trichocarpa] gi|222865367|gb|EEF02498.1|
           predicted protein [Populus trichocarpa]
          Length = 713

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
 Frame = -2

Query: 417 CQDNVSSALAMAIVPSKSCPSGLLPCSVLLMGGDALNQFEHSTNREEVSIDTNKTQGTCT 238
           C  N  +     I+   +C +GL       + G+A    EH+T  E V +     +  C 
Sbjct: 484 CSTNDWAREGQDILAKPTCSTGLS------ISGNASECLEHTTCAEGVLLRKEIVKEACE 537

Query: 237 TVDQVVADLNVASLGHESKESNASKGM---IHSGDSEDA-----MNYVPLDSLR---NSE 91
           +  QV +++    +GH   E NAS  +   I  G + D      +N+    S R   N E
Sbjct: 538 SAGQVSSEMVCIPVGHSGNELNASVMIDTAITEGRNVDIPEQCELNFTEEVSARSHGNGE 597

Query: 90  GSESDEEKMNMSADILEEDSYGFDYEAN 7
           GS +DEEK+N+S D+LEED+YG  YE++
Sbjct: 598 GSVTDEEKINLSGDMLEEDTYGSGYESD 625


>ref|XP_002316325.1| predicted protein [Populus trichocarpa] gi|222865365|gb|EEF02496.1|
           predicted protein [Populus trichocarpa]
          Length = 1317

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
 Frame = -2

Query: 417 CQDNVSSALAMAIVPSKSCPSGLLPCSVLLMGGDALNQFEHSTNREEVSIDTNKTQGTCT 238
           C  N  +     I+   +C +GL       + G+A    EH+T  E V +     +  C 
Sbjct: 484 CSTNDWAREGQDILAKPTCSTGLS------ISGNASECLEHTTCAEGVLLRKEIVKEACE 537

Query: 237 TVDQVVADLNVASLGHESKESNASKGM---IHSGDSEDA-----MNYVPLDSLR---NSE 91
           +  QV +++    +GH   E NAS  +   I  G + D      +N+    S R   N E
Sbjct: 538 SAGQVSSEMVCIPVGHSGNELNASVMIDTAITEGRNVDIPEQCELNFTEEVSARSHGNGE 597

Query: 90  GSESDEEKMNMSADILEEDSYGFDYEAN 7
           GS +DEEK+N+S D+LEED+YG  YE++
Sbjct: 598 GSVTDEEKINLSGDMLEEDTYGSGYESD 625


>ref|XP_002525074.1| hypothetical protein RCOM_0745050 [Ricinus communis]
            gi|223535655|gb|EEF37321.1| hypothetical protein
            RCOM_0745050 [Ricinus communis]
          Length = 1517

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
 Frame = -2

Query: 312  LNQFEHSTNREEVSIDTNKTQGTCTTVDQVVADLNVASLGHESKESNASKGMIHSGDSED 133
            L+ +      E V +     + +C + +QV A++       +S + N   G + +  SE 
Sbjct: 660  LSDYSGHRGDEGVHLSNEAPEESCESAEQVAAEMGSLP-ACQSCDENKCSGTVDAAVSEK 718

Query: 132  AM------------NYVPLDSLRNSEGSESDEEKMNMSADILEEDSYGFDYEANCN 1
                          + VP D+ RN +G+ SD+EK+N+S D+LEEDSYG +YE++ N
Sbjct: 719  KSVDNSDQCKLKFKDAVPPDAHRNGDGTVSDDEKINLSGDMLEEDSYGSEYESDGN 774


>ref|XP_002311130.1| predicted protein [Populus trichocarpa] gi|222850950|gb|EEE88497.1|
           predicted protein [Populus trichocarpa]
          Length = 1370

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
 Frame = -2

Query: 333 LLMGGDALNQFEHSTNREEVSIDTNKTQGTCTTVDQVVADLNVASLGHESKESNASKG-- 160
           L + G+A ++ E++T  E   +     +    +  QV +++    +GH  +E +AS    
Sbjct: 513 LSISGNASDRLEYTTCVEGALLRNAMPKEAPESAGQVSSEMVSMPVGHSGEELDASVKID 572

Query: 159 ----MIHSGDSEDAMNY-----VPLDSLRNSEGSESDEEKMNMSADILEEDSYGFDYEAN 7
               M  +GD+ +         VP  S  N E S +DEEK+N+S D++EEDSYG  YE++
Sbjct: 573 TAITMDRNGDAPEQCELKITEEVPAGSHGNGEASVTDEEKINLSGDMIEEDSYGSGYESD 632

Query: 6   CN 1
            N
Sbjct: 633 GN 634


>ref|XP_003535782.1| PREDICTED: uncharacterized protein LOC100817471 [Glycine max]
          Length = 1396

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
 Frame = -2

Query: 411 DNVSSALAMAIVPSKSCPSGLLPCSV--------LLMGGDALNQFEHSTNREEVSIDTNK 256
           DN S ++AM ++P  +  S    C+         L    + ++Q E+S+  E V+++   
Sbjct: 523 DNSSPSMAMPVMPDTTQISAEPACAPVKPMCTAELSTSENTVSQIENSSPTEGVNVE-KV 581

Query: 255 TQGTCTTVDQVVADL-------NVASLGHESKESNASKGMIHSGDSEDA-----MNYVPL 112
             G C   +QV+ +        N   L +   ++++      +    DA     MN  P 
Sbjct: 582 CDGACLNAEQVIIETVAMPMVDNGLVLNNPGLQTSSVSTEEENAADRDACRLKLMNEPPP 641

Query: 111 DSLRNSEGSESDEEKMNMSADILEEDSYGFDYEANCN 1
            S  N EG  SDEEK+ +S D+LE+DSY  D E++ N
Sbjct: 642 ASRGNGEGCASDEEKITLSTDMLEDDSYDSDSESDEN 678


Top