BLASTX nr result

ID: Panax21_contig00028906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028906
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331314.1| predicted protein [Populus trichocarpa] gi|2...    61   3e-07
ref|XP_002300442.1| predicted protein [Populus trichocarpa] gi|2...    59   7e-07
ref|XP_002285665.1| PREDICTED: prenyl transferase-like [Vitis vi...    58   2e-06
emb|CBI20085.3| unnamed protein product [Vitis vinifera]               58   2e-06
emb|CAN80568.1| hypothetical protein VITISV_004505 [Vitis vinifera]    57   5e-06

>ref|XP_002331314.1| predicted protein [Populus trichocarpa] gi|222873897|gb|EEF11028.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
 Frame = -3

Query: 710 KNRSKGAFWSGKNGYGARKLLCFRRDITRTLLGFTSVPPPVL-----------ELKTEPR 564
           +N +K    S    YG R+++C RRDI R  +  T  P  +L            LK E R
Sbjct: 32  RNYAKSVSKSCNRDYGFRRMVCCRRDIARCRVSSTKTPQALLARVAEGPTGLLNLKKESR 91

Query: 563 SPISLVKLFTVVGDDLLTLNNNLQSMFAIW 474
            P+SL  LF VV DDLL L  NL+S+ A++
Sbjct: 92  EPVSLTNLFEVVADDLLNLKKNLRSVSALF 121


>ref|XP_002300442.1| predicted protein [Populus trichocarpa] gi|222847700|gb|EEE85247.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
 Frame = -3

Query: 710 KNRSKGAFWSGKNGYGARKLLCFRRDITRTLLGFTSVPPPV-----------LELKTEPR 564
           +N +K    S    YG+R+L+C RRDI R  +  T  P  +           L+LK + R
Sbjct: 34  RNYAKSVSKSCNRDYGSRRLVCSRRDIARCRVSPTKTPETLPAGVAEGPAGLLKLKKDSR 93

Query: 563 SPISLVKLFTVVGDDLLTLNNNLQSM 486
             IS+  LF VV DDL TLN NLQS+
Sbjct: 94  ESISITNLFEVVADDLQTLNQNLQSI 119


>ref|XP_002285665.1| PREDICTED: prenyl transferase-like [Vitis vinifera]
          Length = 421

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 37/86 (43%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
 Frame = -3

Query: 710 KNRSKGAFWSGKNGYGARKLLCFRRDITR----------TLL-GFTSVPPPVLELKTEPR 564
           +N +KG   S   GY A+K++  +R I R          TLL G    PPP L++K E  
Sbjct: 35  RNSAKGVSKSSSRGYAAKKMVYCQRRIGRCRVFSTRAPETLLNGVGQGPPPALDVKKESS 94

Query: 563 SPISLVKLFTVVGDDLLTLNNNLQSM 486
           S ISL   F VV DDL  LN NLQS+
Sbjct: 95  SSISLASFFEVVADDLQILNQNLQSI 120


>emb|CBI20085.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 37/86 (43%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
 Frame = -3

Query: 710 KNRSKGAFWSGKNGYGARKLLCFRRDITR----------TLL-GFTSVPPPVLELKTEPR 564
           +N +KG   S   GY A+K++  +R I R          TLL G    PPP L++K E  
Sbjct: 34  RNSAKGVSKSSSRGYAAKKMVYCQRRIGRCRVFSTRAPETLLNGVGQGPPPALDVKKESS 93

Query: 563 SPISLVKLFTVVGDDLLTLNNNLQSM 486
           S ISL   F VV DDL  LN NLQS+
Sbjct: 94  SSISLASFFEVVADDLQILNQNLQSI 119


>emb|CAN80568.1| hypothetical protein VITISV_004505 [Vitis vinifera]
          Length = 421

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
 Frame = -3

Query: 710 KNRSKGAFWSGKNGYGARKLLCFRRDITR----------TLL-GFTSVPPPVLELKTEPR 564
           +N +KG   S   GY A+K++  +R I R          TLL G    PPP L++K E  
Sbjct: 35  RNSAKGVSKSSSRGYAAKKMVYCQRRIGRCRVFSTRAPETLLNGVGQGPPPALDVKKESS 94

Query: 563 SPISLVKLFTVVGDDLLTLNNNLQSM 486
           S +SL   F VV DDL  LN NLQS+
Sbjct: 95  SSMSLASFFEVVADDLQILNQNLQSI 120


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