BLASTX nr result

ID: Panax21_contig00028905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028905
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285144.1| PREDICTED: uncharacterized protein LOC100263...   126   2e-27
ref|XP_003538205.1| PREDICTED: uncharacterized protein LOC100306...   119   3e-25
ref|XP_003539713.1| PREDICTED: uncharacterized protein LOC100787...   117   9e-25
ref|XP_003538206.1| PREDICTED: uncharacterized protein LOC100306...   115   5e-24
ref|XP_002879096.1| hypothetical protein ARALYDRAFT_901664 [Arab...   108   4e-22

>ref|XP_002285144.1| PREDICTED: uncharacterized protein LOC100263969 [Vitis vinifera]
           gi|297746256|emb|CBI16312.3| unnamed protein product
           [Vitis vinifera]
          Length = 85

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/84 (76%), Positives = 72/84 (85%)
 Frame = +3

Query: 102 MISVLTQERLLGAALGSIFTGVVVFEQRRSIYKTISDNQSQLVSQSQIRESIFGKKSRLK 281
           MISVL QERLLGAALGSIFTGV+VFEQR+ IYK+I+D QSQL  QS   E IFGKKSRL+
Sbjct: 1   MISVLAQERLLGAALGSIFTGVIVFEQRKCIYKSIADTQSQLDPQSLKTEPIFGKKSRLE 60

Query: 282 FAHLWNKAVDQTFGPMITSLSSRG 353
           FAHLWNK VD+T GP+I +LSSRG
Sbjct: 61  FAHLWNKTVDKTLGPVIAALSSRG 84


>ref|XP_003538205.1| PREDICTED: uncharacterized protein LOC100306159 isoform 1 [Glycine
           max] gi|255627729|gb|ACU14209.1| unknown [Glycine max]
          Length = 79

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/84 (72%), Positives = 70/84 (83%)
 Frame = +3

Query: 102 MISVLTQERLLGAALGSIFTGVVVFEQRRSIYKTISDNQSQLVSQSQIRESIFGKKSRLK 281
           MIS+LTQERLLGA+LG + TGVVVFEQRR IY +ISD      SQSQ++E IFGKKSR +
Sbjct: 1   MISILTQERLLGASLGVVLTGVVVFEQRRYIYASISD------SQSQVKEPIFGKKSRSE 54

Query: 282 FAHLWNKAVDQTFGPMITSLSSRG 353
           FAH+WNK VDQTFGP+I SLSSRG
Sbjct: 55  FAHVWNKTVDQTFGPLIKSLSSRG 78


>ref|XP_003539713.1| PREDICTED: uncharacterized protein LOC100787578 [Glycine max]
          Length = 87

 Score =  117 bits (294), Expect = 9e-25
 Identities = 60/84 (71%), Positives = 70/84 (83%)
 Frame = +3

Query: 102 MISVLTQERLLGAALGSIFTGVVVFEQRRSIYKTISDNQSQLVSQSQIRESIFGKKSRLK 281
           MIS+L+QERLLGA+LG + TGVVVFEQRR IY +ISD      SQSQ++E IFGKKSR +
Sbjct: 1   MISILSQERLLGASLGVVLTGVVVFEQRRYIYASISD------SQSQVKEPIFGKKSRSE 54

Query: 282 FAHLWNKAVDQTFGPMITSLSSRG 353
           F+HLWNK VDQTFGP+I SLSSRG
Sbjct: 55  FSHLWNKTVDQTFGPLIKSLSSRG 78


>ref|XP_003538206.1| PREDICTED: uncharacterized protein LOC100306159 isoform 2 [Glycine
           max]
          Length = 103

 Score =  115 bits (288), Expect = 5e-24
 Identities = 62/102 (60%), Positives = 72/102 (70%), Gaps = 18/102 (17%)
 Frame = +3

Query: 102 MISVLTQERLLGAALGSIFTGVVVFEQRRSIYKTISDNQSQL------------------ 227
           MIS+LTQERLLGA+LG + TGVVVFEQRR IY +ISD+QSQL                  
Sbjct: 1   MISILTQERLLGASLGVVLTGVVVFEQRRYIYASISDSQSQLVILPHFTAWEGFKMRDGI 60

Query: 228 VSQSQIRESIFGKKSRLKFAHLWNKAVDQTFGPMITSLSSRG 353
           V    ++E IFGKKSR +FAH+WNK VDQTFGP+I SLSSRG
Sbjct: 61  VHHVHVKEPIFGKKSRSEFAHVWNKTVDQTFGPLIKSLSSRG 102


>ref|XP_002879096.1| hypothetical protein ARALYDRAFT_901664 [Arabidopsis lyrata subsp.
           lyrata] gi|297324935|gb|EFH55355.1| hypothetical protein
           ARALYDRAFT_901664 [Arabidopsis lyrata subsp. lyrata]
          Length = 85

 Score =  108 bits (271), Expect = 4e-22
 Identities = 54/83 (65%), Positives = 66/83 (79%)
 Frame = +3

Query: 102 MISVLTQERLLGAALGSIFTGVVVFEQRRSIYKTISDNQSQLVSQSQIRESIFGKKSRLK 281
           MIS+L QERLLG  LG+  TG VVFEQR+ I++++SD +SQ V QSQ+R+ IFGKK R++
Sbjct: 1   MISILAQERLLGFTLGTALTGFVVFEQRKLIHESVSDPKSQFVDQSQVRDRIFGKKYRME 60

Query: 282 FAHLWNKAVDQTFGPMITSLSSR 350
           FA LWNKAVDQTF P I  LSSR
Sbjct: 61  FASLWNKAVDQTFEPAIEYLSSR 83


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