BLASTX nr result

ID: Panax21_contig00028901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028901
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329674.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-20
gb|ABA81866.1| unknown [Solanum tuberosum]                             99   5e-19
ref|XP_002312627.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_002283637.1| PREDICTED: mitochondrial import inner membra...    97   1e-18
ref|XP_002514217.1| mitochondrial import inner membrane transloc...    97   2e-18

>ref|XP_002329674.1| predicted protein [Populus trichocarpa] gi|222870555|gb|EEF07686.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  100 bits (250), Expect = 9e-20
 Identities = 58/108 (53%), Positives = 69/108 (63%), Gaps = 5/108 (4%)
 Frame = -2

Query: 311 SFDQGMRAASRSAVFGGVLLALIEGAGIMLNKVMSAQQDMPIMMEEPVPNIAGG-----G 147
           S  QG+ A+ RSA+FGGVLLALIEGAGIMLNKVMSAQQ+MPIM+E+PVP++AGG     G
Sbjct: 104 SMRQGLGASGRSALFGGVLLALIEGAGIMLNKVMSAQQEMPIMIEDPVPSMAGGHGSPMG 163

Query: 146 LPGFQLPNQTQQSKPSAXXXXXXXXXGNKKEETKTSGGVKTEVLESFD 3
            P          S  ++         G KKE      G KTE+LESFD
Sbjct: 164 QPHAHAQEGASASGTNSGSWFGGWFGGGKKESEANISGSKTEILESFD 211


>gb|ABA81866.1| unknown [Solanum tuberosum]
          Length = 236

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 65/121 (53%), Positives = 75/121 (61%), Gaps = 21/121 (17%)
 Frame = -2

Query: 302 QGMRAASRSAVFGGVLLALIEGAGIMLNKVMSAQQDMPIMMEEPVPNIAG-GGLPGFQLP 126
           QG+ AASRSA+FGGVLLALIEGAGIMLNKVMSA Q+ P  M+EP+PN+ G  G P  QLP
Sbjct: 107 QGLGAASRSAMFGGVLLALIEGAGIMLNKVMSAPQNFP-PMDEPLPNVPGVPGYPPGQLP 165

Query: 125 NQ-----------------TQQSKP---SAXXXXXXXXXGNKKEETKTSGGVKTEVLESF 6
            Q                 T+ S P   S+         G KKEET +SGG KT+VLESF
Sbjct: 166 GQPMGKLPGQAPVSIDGMMTESSAPSSSSSTSWFGGLFGGGKKEETTSSGGSKTQVLESF 225

Query: 5   D 3
           D
Sbjct: 226 D 226


>ref|XP_002312627.1| predicted protein [Populus trichocarpa] gi|222852447|gb|EEE89994.1|
           predicted protein [Populus trichocarpa]
          Length = 214

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 58/104 (55%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
 Frame = -2

Query: 311 SFDQGMRAASRSAVFGGVLLALIEGAGIMLNKVMSAQQDMPIMM-EEPVPNIAGGGLPGF 135
           S  QG+ A++RSAVFGGVLL LIEGAGIMLNKVM  QQ MPIM+ E+P+P +AGGG  GF
Sbjct: 104 SMRQGLGASARSAVFGGVLLGLIEGAGIMLNKVMGDQQSMPIMIDEDPIPAMAGGGPGGF 163

Query: 134 QLPNQTQQSKPSAXXXXXXXXXGNKKEETKTSGGVKTEVLESFD 3
            +  Q Q+ +  +           KKE T  S   KTEVLESFD
Sbjct: 164 PM-GQAQEGESGSWFGGWFGGEKKKKESTAASS--KTEVLESFD 204


>ref|XP_002283637.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Vitis vinifera]
          Length = 226

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 54/109 (49%), Positives = 71/109 (65%), Gaps = 9/109 (8%)
 Frame = -2

Query: 302 QGMRAASRSAVFGGVLLALIEGAGIMLNKVMSAQQDMPIMMEEPVPNIAGGGLPGF---Q 132
           QG+ A++RSA+FGGVLL LIEGAGIMLNKV+SA Q++P+ MEEPVP +  G + G+   Q
Sbjct: 107 QGLAASTRSAIFGGVLLGLIEGAGIMLNKVLSAPQNLPMTMEEPVPGMTPGPVSGYPMGQ 166

Query: 131 LPNQTQQSKPS------AXXXXXXXXXGNKKEETKTSGGVKTEVLESFD 3
           LP  T  + P+      +         G KK+E   + G KTE+LESFD
Sbjct: 167 LPGMTPPAPPAPEPSSGSSSWFGGLFGGGKKQEPAANSGSKTEILESFD 215


>ref|XP_002514217.1| mitochondrial import inner membrane translocase subunit tim17,
           putative [Ricinus communis] gi|223546673|gb|EEF48171.1|
           mitochondrial import inner membrane translocase subunit
           tim17, putative [Ricinus communis]
          Length = 216

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 56/104 (53%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
 Frame = -2

Query: 311 SFDQGMRAASRSAVFGGVLLALIEGAGIMLNKVMSAQQDMPIMMEEPVPNIAG-GGLPGF 135
           S  QG+ A++R+A+FGG+LL LIEGAGIMLNKVMSAQQ+MP+M+++  P +AG   LPG 
Sbjct: 104 SMRQGLGASARAALFGGILLGLIEGAGIMLNKVMSAQQNMPVMIDDSAPAMAGLPSLPG- 162

Query: 134 QLPNQTQQSKPSAXXXXXXXXXGNKKEETKTSGGVKTEVLESFD 3
           Q P  T     S          G K EE  TS G KTE+LESFD
Sbjct: 163 QEPASTSSGSESGSSWFGGWFGGGKTEEPITSKGGKTEILESFD 206


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