BLASTX nr result

ID: Panax21_contig00028852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028852
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24211.3| unnamed protein product [Vitis vinifera]              261   7e-68
ref|XP_002278992.1| PREDICTED: phytochromobilin:ferredoxin oxido...   261   7e-68
ref|XP_002313368.1| predicted protein [Populus trichocarpa] gi|2...   249   3e-64
ref|XP_002516715.1| Phytochromobilin:ferredoxin oxidoreductase, ...   246   4e-63
ref|NP_001234133.1| phytochromobilin synthase [Solanum lycopersi...   244   9e-63

>emb|CBI24211.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  261 bits (668), Expect = 7e-68
 Identities = 119/154 (77%), Positives = 139/154 (90%)
 Frame = +3

Query: 3   LLPWGGKISSESLRFFSPIVIWTKFSSSQNNHNILYSAFMDYYKAWLELMDHAAEEMDAS 182
           LLPWGGK++SESLRFFSPIVIWTKF+SSQ  H +LYSAFMDYYKAWLELM+ AAEE D S
Sbjct: 223 LLPWGGKLTSESLRFFSPIVIWTKFTSSQYKHGVLYSAFMDYYKAWLELMEQAAEERDTS 282

Query: 183 RISCNRAAQHRYLTWREEKDPGHQLLKKLIGETRAKDLMRNFLFSGINELGSKTFLDYFP 362
           +I CNR AQHRYLTWR EKDPGH++LKKLIGE+ +KDL+R+FLF+G++ELG+KTFLDYFP
Sbjct: 283 QIICNREAQHRYLTWRAEKDPGHRILKKLIGESLSKDLVRSFLFNGVDELGTKTFLDYFP 342

Query: 363 EYKSEDGTVNAKRSIIGKSYEKRPWDTKGEFIGN 464
           EY  E+GT+N KRSIIGKS+E RPWDT GEFIG+
Sbjct: 343 EYCCENGTINDKRSIIGKSFESRPWDTSGEFIGS 376


>ref|XP_002278992.1| PREDICTED: phytochromobilin:ferredoxin oxidoreductase,
           chloroplastic-like [Vitis vinifera]
          Length = 330

 Score =  261 bits (668), Expect = 7e-68
 Identities = 119/154 (77%), Positives = 139/154 (90%)
 Frame = +3

Query: 3   LLPWGGKISSESLRFFSPIVIWTKFSSSQNNHNILYSAFMDYYKAWLELMDHAAEEMDAS 182
           LLPWGGK++SESLRFFSPIVIWTKF+SSQ  H +LYSAFMDYYKAWLELM+ AAEE D S
Sbjct: 166 LLPWGGKLTSESLRFFSPIVIWTKFTSSQYKHGVLYSAFMDYYKAWLELMEQAAEERDTS 225

Query: 183 RISCNRAAQHRYLTWREEKDPGHQLLKKLIGETRAKDLMRNFLFSGINELGSKTFLDYFP 362
           +I CNR AQHRYLTWR EKDPGH++LKKLIGE+ +KDL+R+FLF+G++ELG+KTFLDYFP
Sbjct: 226 QIICNREAQHRYLTWRAEKDPGHRILKKLIGESLSKDLVRSFLFNGVDELGTKTFLDYFP 285

Query: 363 EYKSEDGTVNAKRSIIGKSYEKRPWDTKGEFIGN 464
           EY  E+GT+N KRSIIGKS+E RPWDT GEFIG+
Sbjct: 286 EYCCENGTINDKRSIIGKSFESRPWDTSGEFIGS 319


>ref|XP_002313368.1| predicted protein [Populus trichocarpa] gi|222849776|gb|EEE87323.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  249 bits (637), Expect = 3e-64
 Identities = 113/153 (73%), Positives = 136/153 (88%)
 Frame = +3

Query: 3   LLPWGGKISSESLRFFSPIVIWTKFSSSQNNHNILYSAFMDYYKAWLELMDHAAEEMDAS 182
           L PWGGK++SESL+FFSPIVIWTKF  SQ++++ LYSAF +YYKAWLEL+D A EE+DAS
Sbjct: 148 LFPWGGKLTSESLKFFSPIVIWTKFPPSQDSYDALYSAFTEYYKAWLELIDQAPEEIDAS 207

Query: 183 RISCNRAAQHRYLTWREEKDPGHQLLKKLIGETRAKDLMRNFLFSGINELGSKTFLDYFP 362
            I+ NR AQH+YLTWREEKDPGH +LK+LIGE  AKDL+RNFLF+G++ELGSK FLDYFP
Sbjct: 208 HITFNREAQHKYLTWREEKDPGHGILKRLIGERLAKDLVRNFLFNGLDELGSKGFLDYFP 267

Query: 363 EYKSEDGTVNAKRSIIGKSYEKRPWDTKGEFIG 461
           EY+ EDG++N KRSIIGKS+EKRPWD +GEFIG
Sbjct: 268 EYRREDGSINEKRSIIGKSFEKRPWDARGEFIG 300


>ref|XP_002516715.1| Phytochromobilin:ferredoxin oxidoreductase, chloroplast precursor,
           putative [Ricinus communis] gi|223544210|gb|EEF45734.1|
           Phytochromobilin:ferredoxin oxidoreductase, chloroplast
           precursor, putative [Ricinus communis]
          Length = 330

 Score =  246 bits (627), Expect = 4e-63
 Identities = 109/155 (70%), Positives = 134/155 (86%)
 Frame = +3

Query: 3   LLPWGGKISSESLRFFSPIVIWTKFSSSQNNHNILYSAFMDYYKAWLELMDHAAEEMDAS 182
           L PWGGK++SESL+FFSPIV+WTKF+SSQ+ H+ LYSAF DYYK WL+L++ A EE D S
Sbjct: 173 LFPWGGKLTSESLQFFSPIVLWTKFTSSQSKHDDLYSAFADYYKVWLQLIEQAVEETDIS 232

Query: 183 RISCNRAAQHRYLTWREEKDPGHQLLKKLIGETRAKDLMRNFLFSGINELGSKTFLDYFP 362
           +I CNR AQH+YLTWR EKDPGH +LKKLIGE+ AKDL+RNFLF+G++ELGSK FLDYFP
Sbjct: 233 QIICNREAQHKYLTWRAEKDPGHGVLKKLIGESLAKDLVRNFLFNGLDELGSKGFLDYFP 292

Query: 363 EYKSEDGTVNAKRSIIGKSYEKRPWDTKGEFIGNS 467
           +Y+ +DG +N KRS+IGKS+E RPWD  GEFIGN+
Sbjct: 293 QYRCKDGNINEKRSVIGKSFEMRPWDINGEFIGNN 327


>ref|NP_001234133.1| phytochromobilin synthase [Solanum lycopersicum]
           gi|62149356|dbj|BAD93478.1| phytochromobilin synthase
           [Solanum lycopersicum] gi|62149358|dbj|BAD93479.1|
           phytochromobilin synthase [Solanum lycopersicum]
          Length = 342

 Score =  244 bits (624), Expect = 9e-63
 Identities = 110/154 (71%), Positives = 134/154 (87%)
 Frame = +3

Query: 3   LLPWGGKISSESLRFFSPIVIWTKFSSSQNNHNILYSAFMDYYKAWLELMDHAAEEMDAS 182
           LLPWGGK++SESLRFFSPIVIWT+FSSS +NH++L+SAF DYY+AWL LMD +  E DAS
Sbjct: 184 LLPWGGKLTSESLRFFSPIVIWTRFSSSPHNHSVLFSAFKDYYQAWLGLMDRSEGETDAS 243

Query: 183 RISCNRAAQHRYLTWREEKDPGHQLLKKLIGETRAKDLMRNFLFSGINELGSKTFLDYFP 362
           +I+CN  AQHRYLTWR EKDPGH +LK+LIGE  AKD++  FLF+G+NELG+KTFLDYFP
Sbjct: 244 QIACNCEAQHRYLTWRSEKDPGHGVLKRLIGEDLAKDVITKFLFNGVNELGNKTFLDYFP 303

Query: 363 EYKSEDGTVNAKRSIIGKSYEKRPWDTKGEFIGN 464
           EY+ EDG VN KRS+IGKS+E RPW+ +GEFIG+
Sbjct: 304 EYRCEDGKVNEKRSMIGKSFENRPWNARGEFIGD 337


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