BLASTX nr result

ID: Panax21_contig00028847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028847
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280625.1| PREDICTED: uncharacterized protein LOC100258...   159   2e-37
emb|CAN62034.1| hypothetical protein VITISV_014731 [Vitis vinifera]   157   6e-37
ref|XP_002321395.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-35
ref|XP_002521936.1| conserved hypothetical protein [Ricinus comm...   144   6e-33
ref|XP_004157008.1| PREDICTED: putative RNA polymerase II subuni...   134   1e-29

>ref|XP_002280625.1| PREDICTED: uncharacterized protein LOC100258021 [Vitis vinifera]
           gi|296089830|emb|CBI39649.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score =  159 bits (403), Expect = 2e-37
 Identities = 83/131 (63%), Positives = 99/131 (75%)
 Frame = +2

Query: 2   KVYDLHEAYMYCSTSCGVNSRAFAGSLHEERCSVLHPSKLDEVLRLFKEMSVINPKEDEL 181
           KVYDLHE YMYCS+ C VNSR+FAGSL EERCSVL+  +++ +LRLF E S+ + K   L
Sbjct: 82  KVYDLHETYMYCSSGCVVNSRSFAGSLQEERCSVLNSERINGILRLFGESSLESNKI--L 139

Query: 182 GRNGDLGLSELKIQEKEDIKIGEVSMEEWKGPSNAIEGYVPQRDYNTKASHSKNRKEVSK 361
           G++GDLGLSELKI+E  + K GEVSME+W GPSNAIEGYVPQRD N K  + KNRKE SK
Sbjct: 140 GKHGDLGLSELKIRENVEKKAGEVSMEDWIGPSNAIEGYVPQRDRNLKPKNIKNRKEGSK 199

Query: 362 PRYIKPDKEKD 394
               K D  K+
Sbjct: 200 SSNSKMDSGKN 210


>emb|CAN62034.1| hypothetical protein VITISV_014731 [Vitis vinifera]
          Length = 659

 Score =  157 bits (398), Expect = 6e-37
 Identities = 82/131 (62%), Positives = 98/131 (74%)
 Frame = +2

Query: 2   KVYDLHEAYMYCSTSCGVNSRAFAGSLHEERCSVLHPSKLDEVLRLFKEMSVINPKEDEL 181
           KVYDLHE YMYCS+ C VNSR+FAGSL EERCSVL+  +++ +LRLF E S+ + K   L
Sbjct: 82  KVYDLHETYMYCSSGCVVNSRSFAGSLQEERCSVLNSERINGILRLFGESSLESNKI--L 139

Query: 182 GRNGDLGLSELKIQEKEDIKIGEVSMEEWKGPSNAIEGYVPQRDYNTKASHSKNRKEVSK 361
           G++GDLGLSELKI+E  + K GEVSME+W GPSNAIEGYVPQRD N K  + KN KE SK
Sbjct: 140 GKHGDLGLSELKIRENVEKKAGEVSMEDWIGPSNAIEGYVPQRDRNLKPKNIKNHKEGSK 199

Query: 362 PRYIKPDKEKD 394
               K D  K+
Sbjct: 200 SSNSKMDSGKN 210


>ref|XP_002321395.1| predicted protein [Populus trichocarpa] gi|222868391|gb|EEF05522.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  152 bits (383), Expect = 4e-35
 Identities = 76/117 (64%), Positives = 89/117 (76%)
 Frame = +2

Query: 2   KVYDLHEAYMYCSTSCGVNSRAFAGSLHEERCSVLHPSKLDEVLRLFKEMSVINPKEDEL 181
           KVYDLHE YMYCS+SC +NSR F+GSL EERC VL+P+KL+EVL LF   S+    E  L
Sbjct: 82  KVYDLHETYMYCSSSCVINSRTFSGSLQEERCLVLNPAKLNEVLMLFDNFSL--GSEGSL 139

Query: 182 GRNGDLGLSELKIQEKEDIKIGEVSMEEWKGPSNAIEGYVPQRDYNTKASHSKNRKE 352
           G+NGDLG S LKI+EK +   GEVS E+W GPSNAIEGYVPQRD N+K+   KN KE
Sbjct: 140 GKNGDLGFSNLKIEEKTEKVEGEVSFEQWIGPSNAIEGYVPQRDRNSKSLPLKNHKE 196


>ref|XP_002521936.1| conserved hypothetical protein [Ricinus communis]
           gi|223538861|gb|EEF40460.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 645

 Score =  144 bits (364), Expect = 6e-33
 Identities = 76/131 (58%), Positives = 96/131 (73%)
 Frame = +2

Query: 2   KVYDLHEAYMYCSTSCGVNSRAFAGSLHEERCSVLHPSKLDEVLRLFKEMSVINPKEDEL 181
           +VYDL E YMYCS+SC VNSRAF+ SL E+RCSVL+P KL+E+LR F ++++     + L
Sbjct: 82  RVYDLQETYMYCSSSCLVNSRAFSESLQEKRCSVLNPIKLNEILRKFNDLTL---DSEGL 138

Query: 182 GRNGDLGLSELKIQEKEDIKIGEVSMEEWKGPSNAIEGYVPQRDYNTKASHSKNRKEVSK 361
           GR+GDLGLS LKIQEK +  +G+VS+EEW GPSNAIEGYVPQ D +   S  KN KE  K
Sbjct: 139 GRSGDLGLSNLKIQEKSETNVGKVSLEEWIGPSNAIEGYVPQGDRDPNPS-LKNHKEGLK 197

Query: 362 PRYIKPDKEKD 394
               KP  ++D
Sbjct: 198 AICKKPVSKQD 208


>ref|XP_004157008.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog [Cucumis sativus]
          Length = 632

 Score =  134 bits (336), Expect = 1e-29
 Identities = 66/117 (56%), Positives = 85/117 (72%)
 Frame = +2

Query: 2   KVYDLHEAYMYCSTSCGVNSRAFAGSLHEERCSVLHPSKLDEVLRLFKEMSVINPKEDEL 181
           KVYDL E Y YCS++C +NSRAF+G L +ERCSV++P KL E+L+LF+ MS+    ++ +
Sbjct: 82  KVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDKLKEILKLFENMSL--DSKENM 139

Query: 182 GRNGDLGLSELKIQEKEDIKIGEVSMEEWKGPSNAIEGYVPQRDYNTKASHSKNRKE 352
           G N D G   L+IQEK +  IGEV +EEW GPSNAIEGYVP RD+     HSK+ KE
Sbjct: 140 GNNCDSG---LEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRDHKVMTLHSKDGKE 193


Top