BLASTX nr result

ID: Panax21_contig00028838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028838
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160935.1| PREDICTED: LOW QUALITY PROTEIN: telomere rep...    74   2e-11
ref|XP_004141859.1| PREDICTED: telomere repeat-binding factor 2-...    74   2e-11
gb|ACP30543.2| MYB [Carica papaya]                                     69   7e-10
ref|XP_002525279.1| Histone H1.1, putative [Ricinus communis] gi...    66   4e-09
ref|XP_002864993.1| ATTRB2/TRB2 [Arabidopsis lyrata subsp. lyrat...    63   3e-08

>ref|XP_004160935.1| PREDICTED: LOW QUALITY PROTEIN: telomere repeat-binding factor
           2-like [Cucumis sativus]
          Length = 306

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 2/146 (1%)
 Frame = +2

Query: 14  LEESRGSKRTSVAM*IEVFLRKEQYLTPTNLEGLLAAYLKLMTDNGILIKVKYQDRIAPS 193
           L+E RGS R ++AM IE     E Y  P+NL+ LL+  LK MT NG LIKVK++ RIAP+
Sbjct: 133 LKEPRGSDRAAIAMYIE-----EHYWPPSNLKKLLSTKLKHMTANGKLIKVKHKYRIAPN 187

Query: 194 SPSRDVKTSPLLL--DANKDPPEVEKDGNEILTSSLLLDGKKYPPKAVTNGDKVFTSSLL 367
           SP    + +PLLL  D   D  + EK   +I+T S  +D +    K +T  +    ++  
Sbjct: 188 SPLPGRRNTPLLLLEDKQTDSSKTEKSEVKIITKS-QVDSELSKMKVMTAEEAAIAAARA 246

Query: 368 LDEKEYVLQAENNGNKALTKADIDVE 445
           + E E  +       +   +A+ + E
Sbjct: 247 VAEAEAAIAEAERAAREAEQAEAEAE 272


>ref|XP_004141859.1| PREDICTED: telomere repeat-binding factor 2-like [Cucumis sativus]
          Length = 308

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 2/146 (1%)
 Frame = +2

Query: 14  LEESRGSKRTSVAM*IEVFLRKEQYLTPTNLEGLLAAYLKLMTDNGILIKVKYQDRIAPS 193
           L+E RGS R ++AM IE     E Y  P+NL+ LL+  LK MT NG LIKVK++ RIAP+
Sbjct: 133 LKEPRGSDRAAIAMYIE-----EHYWPPSNLKKLLSTKLKHMTANGKLIKVKHKYRIAPN 187

Query: 194 SPSRDVKTSPLLL--DANKDPPEVEKDGNEILTSSLLLDGKKYPPKAVTNGDKVFTSSLL 367
           SP    + +PLLL  D   D  + EK   +I+T S  +D +    K +T  +    ++  
Sbjct: 188 SPLPGRRNTPLLLLEDKQTDSSKTEKSEVKIITKS-QVDSELSKMKVMTAEEAAIAAARA 246

Query: 368 LDEKEYVLQAENNGNKALTKADIDVE 445
           + E E  +       +   +A+ + E
Sbjct: 247 VAEAEAAIAEAERAAREAEQAEAEAE 272


>gb|ACP30543.2| MYB [Carica papaya]
          Length = 292

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
 Frame = +2

Query: 14  LEESRGSKRTSVAM*IEVFLRKEQYLTPTNLEGLLAAYLKLMTDNGILIKVKYQDRIAPS 193
           L+E RGS R S+   IE     E Y TPTN++ L+A  LK +T NG LIK+K++ RIAPS
Sbjct: 133 LKELRGSDRASIFEYIE-----EHYRTPTNIKRLVATKLKHLTANGTLIKIKHKYRIAPS 187

Query: 194 SPSRDV--KTSPLLLDA-NKDPPEVEKDGNEILTSSLLLDGKKYPPKAVTNGDKVFTSSL 364
           S    V  K+ PL+ +   KD  + EK  N ILT S  +DG+    K +T  +    ++ 
Sbjct: 188 SAIAGVKKKSPPLVFEGRQKDSLKQEKSIN-ILTKS-QIDGELLKIKGMTAQEAAAAAAR 245

Query: 365 LLDEKEYVLQAENNGNKALTKADIDVE 445
            + E E  +       +   KA+ + E
Sbjct: 246 AVAEAEVAIAEAEEAAREAEKAEAEAE 272


>ref|XP_002525279.1| Histone H1.1, putative [Ricinus communis]
           gi|223535437|gb|EEF37107.1| Histone H1.1, putative
           [Ricinus communis]
          Length = 303

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 46/96 (47%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
 Frame = +2

Query: 14  LEESRGSKRTSVAM*IEVFLRKEQYLTPTNLEGLLAAYLKLMTDNGILIKVKYQDRIAPS 193
           L E  GS R S+A+ IE     E+Y  P NL  LLA  LKL+T +G LIKVK++ RIAPS
Sbjct: 134 LREPSGSDRPSIALYIE-----EKYWAPPNLMKLLAGKLKLLTASGKLIKVKHKYRIAPS 188

Query: 194 SP-SRDVKTSPL--LLDANKDPPEVEKDGNEILTSS 292
           S  S   ++SPL  +    KD P+ EK   +ILT S
Sbjct: 189 SAVSEGRRSSPLVRIEGKQKDSPKSEKSNTKILTKS 224


>ref|XP_002864993.1| ATTRB2/TRB2 [Arabidopsis lyrata subsp. lyrata]
           gi|297310828|gb|EFH41252.1| ATTRB2/TRB2 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 292

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
 Frame = +2

Query: 14  LEESRGSKRTSVAM*IEVFLRKEQYLTPTNLEGLLAAYLKLMTDNGILIKVKYQDRIAPS 193
           L+E RGS RTS+ + IE     E + TP N++  +A  LK ++ NG L+K+K++ R + +
Sbjct: 129 LKELRGSDRTSIFLYIE-----ENFKTPPNMKRHVAVRLKHLSSNGTLVKIKHKYRFSSN 183

Query: 194 -SPSRDVKTSP-LLLDAN--KDPPEVEKDGNEILTSSLLLDGKKYPPKAVTNGDKVFTSS 361
             P    + SP L L+ N  KDPP+ E++G + LT S  +DG+ +  K +T       ++
Sbjct: 184 FIPVGARQMSPQLFLEGNNKKDPPKPEENGAKSLTKS-RVDGELFMIKGMTAQKAAEAAA 242

Query: 362 LLLDEKEYVLQAENNGNKALTKADIDVE 445
             + E E+ +       K   +A+ + E
Sbjct: 243 RAVAEAEFAITEAEEAAKEAERAEAEAE 270


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