BLASTX nr result

ID: Panax21_contig00028813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028813
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144495.1| PREDICTED: protein TRANSPARENT TESTA 12-like...    87   1e-15
ref|XP_004144494.1| PREDICTED: protein TRANSPARENT TESTA 12-like...    80   1e-13
emb|CBI28937.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002279330.1| PREDICTED: protein TRANSPARENT TESTA 12 [Vit...    79   5e-13
ref|XP_004173828.1| PREDICTED: protein TRANSPARENT TESTA 12-like...    77   1e-12

>ref|XP_004144495.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Cucumis sativus]
           gi|449493132|ref|XP_004159201.1| PREDICTED: protein
           TRANSPARENT TESTA 12-like [Cucumis sativus]
          Length = 510

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 50/88 (56%), Positives = 54/88 (61%)
 Frame = -3

Query: 264 SRNDVYQPLLQNDQASISPQXXXXXXXXXXXXXXXXSDARFSPLQRYRLAAWIEMKLLFY 85
           S +DV QPL+Q    +  P                 SD     LQRY  A WIEMKLLFY
Sbjct: 5   SPDDVLQPLIQ--PPTTQPPVLSNKHEYSDELESILSDTHLPLLQRYTKATWIEMKLLFY 62

Query: 84  LAAPAVAVYMINYLMSMSTQIFSGHLGN 1
           LAAPAV VY+INYLMSMSTQIFSGHLGN
Sbjct: 63  LAAPAVFVYVINYLMSMSTQIFSGHLGN 90


>ref|XP_004144494.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Cucumis sativus]
          Length = 513

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 50/94 (53%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
 Frame = -3

Query: 273 MGSS-RNDVYQPLLQNDQASI--SPQXXXXXXXXXXXXXXXXSDARFSPLQRYRLAAWIE 103
           MGS   +DV Q LLQ   A++  S                  SD   S + RYR A WIE
Sbjct: 1   MGSIFEDDVRQALLQPASAALLSSHSLCSNHHGGNEELERILSDTEISVMDRYRRATWIE 60

Query: 102 MKLLFYLAAPAVAVYMINYLMSMSTQIFSGHLGN 1
           +KLLFYLAAPAV VY+INY MS STQIFSGHLGN
Sbjct: 61  IKLLFYLAAPAVFVYIINYTMSTSTQIFSGHLGN 94


>emb|CBI28937.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/91 (51%), Positives = 54/91 (59%)
 Frame = -3

Query: 273 MGSSRNDVYQPLLQNDQASISPQXXXXXXXXXXXXXXXXSDARFSPLQRYRLAAWIEMKL 94
           M SSR+ V +P+LQ++     P                 SD R    QR   A W E+KL
Sbjct: 37  MESSRDGVDKPMLQSNP----PLSSERRPETSGQLESILSDTRLPFCQRLLAATWTELKL 92

Query: 93  LFYLAAPAVAVYMINYLMSMSTQIFSGHLGN 1
           LF LA PAVAVYMINYLMSMSTQIF+GHLGN
Sbjct: 93  LFRLAGPAVAVYMINYLMSMSTQIFAGHLGN 123


>ref|XP_002279330.1| PREDICTED: protein TRANSPARENT TESTA 12 [Vitis vinifera]
          Length = 507

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/91 (51%), Positives = 54/91 (59%)
 Frame = -3

Query: 273 MGSSRNDVYQPLLQNDQASISPQXXXXXXXXXXXXXXXXSDARFSPLQRYRLAAWIEMKL 94
           M SSR+ V +P+LQ++     P                 SD R    QR   A W E+KL
Sbjct: 1   MESSRDGVDKPMLQSNP----PLSSERRPETSGQLESILSDTRLPFCQRLLAATWTELKL 56

Query: 93  LFYLAAPAVAVYMINYLMSMSTQIFSGHLGN 1
           LF LA PAVAVYMINYLMSMSTQIF+GHLGN
Sbjct: 57  LFRLAGPAVAVYMINYLMSMSTQIFAGHLGN 87


>ref|XP_004173828.1| PREDICTED: protein TRANSPARENT TESTA 12-like, partial [Cucumis
           sativus]
          Length = 307

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/86 (51%), Positives = 49/86 (56%)
 Frame = -3

Query: 258 NDVYQPLLQNDQASISPQXXXXXXXXXXXXXXXXSDARFSPLQRYRLAAWIEMKLLFYLA 79
           +DV QPLL N  A                     S+     L RY  A WIEMKLLFYLA
Sbjct: 3   SDVLQPLLSNKNAC------------NDELENLLSNTHLPLLHRYTQATWIEMKLLFYLA 50

Query: 78  APAVAVYMINYLMSMSTQIFSGHLGN 1
            PA+ VYM+NYLM+M TQIFSGHLGN
Sbjct: 51  TPAIFVYMMNYLMTMFTQIFSGHLGN 76


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