BLASTX nr result

ID: Panax21_contig00028807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028807
         (924 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553645.1| PREDICTED: peptide chain release factor 1-li...   405   e-111
ref|XP_003521543.1| PREDICTED: peptide chain release factor 1-li...   405   e-111
ref|XP_002520666.1| peptide chain release factor, putative [Rici...   404   e-110
ref|XP_002269884.1| PREDICTED: peptide chain release factor 1 [V...   402   e-110
gb|ACU20952.1| unknown [Glycine max]                                  400   e-109

>ref|XP_003553645.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 428

 Score =  405 bits (1040), Expect = e-111
 Identities = 203/231 (87%), Positives = 218/231 (94%)
 Frame = +1

Query: 1   VRMYQRYSERNSLRYSALSCSEAEKGGFKTYVMEIKGKRVYSKLKYESGVHRVQRVPQTE 180
           VRMY+RYSERNS +YS +S S AEKGG+KTYVMEIKG RVYSKLKYESGVHRVQRVP TE
Sbjct: 197 VRMYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTE 256

Query: 181 AQGRVHTSTATVAIMPEADEVEVEIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTG 360
            QGRVHTSTATVAIMPEADEVEV IDPKDIELTTARSGGAGGQNVNKVETA+DLFHKPTG
Sbjct: 257 TQGRVHTSTATVAIMPEADEVEVIIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTG 316

Query: 361 IRIFCTEERSQLKNKNRAMQLLRAKLYEIKLREQQESIRSERKSQVGSGARAEKIRTYNY 540
           IRIFCTEER+QLKNKNRA QLLRAKLYE+K+REQQES+R++RK QVG+GAR+EKIRTYNY
Sbjct: 317 IRIFCTEERTQLKNKNRAFQLLRAKLYEMKIREQQESLRNQRKLQVGTGARSEKIRTYNY 376

Query: 541 KDNRVTDHRLKMNFELTSFLDGDIETAVQSSATMEQKELLEELAESVGAPA 693
           KDNRVTDHRLK+N+ELTSFLDGDIE AVQS  TMEQKELLEELAESVGAPA
Sbjct: 377 KDNRVTDHRLKINYELTSFLDGDIEDAVQSCVTMEQKELLEELAESVGAPA 427


>ref|XP_003521543.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 429

 Score =  405 bits (1040), Expect = e-111
 Identities = 203/231 (87%), Positives = 218/231 (94%)
 Frame = +1

Query: 1   VRMYQRYSERNSLRYSALSCSEAEKGGFKTYVMEIKGKRVYSKLKYESGVHRVQRVPQTE 180
           VRMY+RYSERNS +YS +S S AEKGG+KTYVMEIKG RVYSKLKYESGVHRVQRVP TE
Sbjct: 198 VRMYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTE 257

Query: 181 AQGRVHTSTATVAIMPEADEVEVEIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTG 360
            QGRVHTSTATVAIMPEADEVEV IDPKDIELTTARSGGAGGQNVNKVETA+DLFHKPTG
Sbjct: 258 TQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTG 317

Query: 361 IRIFCTEERSQLKNKNRAMQLLRAKLYEIKLREQQESIRSERKSQVGSGARAEKIRTYNY 540
           IRIFCTEER+QLKN+NRA QLLRAKLYEIK+REQQES+R++RK QVG+GAR+EKIRTYNY
Sbjct: 318 IRIFCTEERTQLKNRNRAFQLLRAKLYEIKVREQQESLRNQRKLQVGTGARSEKIRTYNY 377

Query: 541 KDNRVTDHRLKMNFELTSFLDGDIETAVQSSATMEQKELLEELAESVGAPA 693
           KDNRVTDHRLK+N+ELTSFLDGDIE AVQS  TMEQKELLEELAESVGAPA
Sbjct: 378 KDNRVTDHRLKINYELTSFLDGDIEDAVQSCVTMEQKELLEELAESVGAPA 428


>ref|XP_002520666.1| peptide chain release factor, putative [Ricinus communis]
           gi|223540051|gb|EEF41628.1| peptide chain release
           factor, putative [Ricinus communis]
          Length = 370

 Score =  404 bits (1038), Expect = e-110
 Identities = 201/231 (87%), Positives = 219/231 (94%)
 Frame = +1

Query: 1   VRMYQRYSERNSLRYSALSCSEAEKGGFKTYVMEIKGKRVYSKLKYESGVHRVQRVPQTE 180
           VRMY++Y E+NS +Y+ +SCSEAEKGG+KTYVME+KG RVYSKLKYESGVHRVQRVPQTE
Sbjct: 139 VRMYEKYCEQNSWKYAIVSCSEAEKGGYKTYVMEVKGNRVYSKLKYESGVHRVQRVPQTE 198

Query: 181 AQGRVHTSTATVAIMPEADEVEVEIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTG 360
            QGRVHTSTATVAIMPEADEVEV IDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTG
Sbjct: 199 TQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTG 258

Query: 361 IRIFCTEERSQLKNKNRAMQLLRAKLYEIKLREQQESIRSERKSQVGSGARAEKIRTYNY 540
           IRIFCTEER+QL+NK RA+QLLRAKLYE+K+REQQESIR++RK QVG+GARAEKIRTYNY
Sbjct: 259 IRIFCTEERTQLQNKTRALQLLRAKLYEMKVREQQESIRNQRKLQVGTGARAEKIRTYNY 318

Query: 541 KDNRVTDHRLKMNFELTSFLDGDIETAVQSSATMEQKELLEELAESVGAPA 693
           KDNRVTDHRLKMNFELTSFL GDIE AVQ+ A+ EQKELLEELAESVGAPA
Sbjct: 319 KDNRVTDHRLKMNFELTSFLQGDIENAVQACASTEQKELLEELAESVGAPA 369


>ref|XP_002269884.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
           gi|296086617|emb|CBI32252.3| unnamed protein product
           [Vitis vinifera]
          Length = 411

 Score =  402 bits (1033), Expect = e-110
 Identities = 202/231 (87%), Positives = 217/231 (93%)
 Frame = +1

Query: 1   VRMYQRYSERNSLRYSALSCSEAEKGGFKTYVMEIKGKRVYSKLKYESGVHRVQRVPQTE 180
           VRMYQ+YSERNS +Y+ +S SEAEKGGFKTYV+E+KG  VYSKLKYESGVHRVQRVPQTE
Sbjct: 180 VRMYQKYSERNSWKYAPVSSSEAEKGGFKTYVLEVKGNCVYSKLKYESGVHRVQRVPQTE 239

Query: 181 AQGRVHTSTATVAIMPEADEVEVEIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTG 360
            QGRVHTSTATVAIMPEADEVEV IDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTG
Sbjct: 240 TQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTG 299

Query: 361 IRIFCTEERSQLKNKNRAMQLLRAKLYEIKLREQQESIRSERKSQVGSGARAEKIRTYNY 540
           IRIFCTEER+QL+N++RA+QLLRAKLYEIK+REQQE IR++RKSQVG+GARAEKIRTYNY
Sbjct: 300 IRIFCTEERTQLQNRSRALQLLRAKLYEIKVREQQELIRNQRKSQVGTGARAEKIRTYNY 359

Query: 541 KDNRVTDHRLKMNFELTSFLDGDIETAVQSSATMEQKELLEELAESVGAPA 693
           KDNRVTDHRLKMNFELTSFLDGDIETAVQS   MEQKELLEELA SV  PA
Sbjct: 360 KDNRVTDHRLKMNFELTSFLDGDIETAVQSCVAMEQKELLEELAHSVATPA 410


>gb|ACU20952.1| unknown [Glycine max]
          Length = 230

 Score =  400 bits (1027), Expect = e-109
 Identities = 200/228 (87%), Positives = 215/228 (94%)
 Frame = +1

Query: 7   MYQRYSERNSLRYSALSCSEAEKGGFKTYVMEIKGKRVYSKLKYESGVHRVQRVPQTEAQ 186
           MY+RYSERNS +YS +S S AEKGG+KTYVMEIKG RVYSKLKYESGVHRVQRVP TE Q
Sbjct: 1   MYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTETQ 60

Query: 187 GRVHTSTATVAIMPEADEVEVEIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTGIR 366
           GRVHTSTATVAIMPEADEVEV IDPKDIELTTARSGGAGGQNVNKVETA+DLFHKPTGIR
Sbjct: 61  GRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIR 120

Query: 367 IFCTEERSQLKNKNRAMQLLRAKLYEIKLREQQESIRSERKSQVGSGARAEKIRTYNYKD 546
           IFCTEER+QLKN+NRA QLLRAKLYEIK+REQQES+R++RK QVG+GAR+EKIRTYNYKD
Sbjct: 121 IFCTEERTQLKNRNRAFQLLRAKLYEIKVREQQESLRNQRKLQVGTGARSEKIRTYNYKD 180

Query: 547 NRVTDHRLKMNFELTSFLDGDIETAVQSSATMEQKELLEELAESVGAP 690
           NRVTDHRLK+N+ELTSFLDGDIE AVQS  TMEQKELLEELAESVGAP
Sbjct: 181 NRVTDHRLKINYELTSFLDGDIEDAVQSCVTMEQKELLEELAESVGAP 228


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