BLASTX nr result

ID: Panax21_contig00028778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028778
         (1264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534314.1| conserved hypothetical protein [Ricinus comm...   363   4e-98
ref|XP_002866911.1| hypothetical protein ARALYDRAFT_353023 [Arab...   343   7e-92
ref|XP_004143450.1| PREDICTED: GLABRA2 expression modulator-like...   342   2e-91
ref|NP_565538.1| GLABRA2 expression modulator [Arabidopsis thali...   333   4e-89
ref|XP_002878618.1| hypothetical protein ARALYDRAFT_481108 [Arab...   332   1e-88

>ref|XP_002534314.1| conserved hypothetical protein [Ricinus communis]
            gi|223525515|gb|EEF28070.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 313

 Score =  363 bits (933), Expect = 4e-98
 Identities = 192/328 (58%), Positives = 232/328 (70%), Gaps = 10/328 (3%)
 Frame = +1

Query: 97   KTRPHLKSPAKFSRAS*TMEQPNGVEENVVKKPEADHQNSVKPGQDPSPQPDPKLXXXXX 276
            K  P  + P   S+   T +      E+ +   +A+  ++   G DP             
Sbjct: 6    KAEPEQRKPVHDSKQDFTPDPKIENREDALVNGDAEKSSAAATGSDPE------------ 53

Query: 277  XXXXXXXINDGKSNATWNKSRKSVRWSEELVTES---------SSYTSRTMNPSSIDVGG 429
                   ++  +       +RKSV WS ELVTES         S+      N +++   G
Sbjct: 54   -------VDQLQGPNRMGSARKSVHWSPELVTESHASQNNSSNSNNNEHNNNNNNVYFDG 106

Query: 430  SNPYVAYAPAQ-SNPSSFNFKNSMDNVRDVLGRWGKKVGEATKKAEDLAGNTWQHLKTAP 606
            SNPYV+ +PAQ S+ SSF+FK++M +VRDVLG  GKKVGEATKKAEDLAGNTWQHLKT+P
Sbjct: 107  SNPYVSSSPAQASSSSSFSFKDTMGSVRDVLGS-GKKVGEATKKAEDLAGNTWQHLKTSP 165

Query: 607  SLADAALGRIAQGTKVLAEGGYEKIFQQTFDTVPEEQLQNSFACYVSTSAGPVMGVLYVS 786
            S  DAALGRIAQGTKVLAEGGYEKIF+QTF+TVPEEQLQNS+ACY+STSAGPVMG+LYVS
Sbjct: 166  SFTDAALGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLQNSYACYLSTSAGPVMGILYVS 225

Query: 787  TSKLAYCSDNPLSYKVDDNIEWSYYKVVIPLHQLKAVNSSSSRTNSAEKYIQIISVDNHE 966
            T+KLA+CSDNPLSYK     EWSYYKVVIPLHQLKAVN SSSRTN AEKY+Q+ISVDNHE
Sbjct: 226  TAKLAFCSDNPLSYKNSGQTEWSYYKVVIPLHQLKAVNPSSSRTNPAEKYVQVISVDNHE 285

Query: 967  FWYMGFLNYDGAVRCLEEALQSRNLHSV 1050
            FW+MGFLNYDGAV+CL++ LQ+ +L SV
Sbjct: 286  FWFMGFLNYDGAVKCLQDGLQAHSLQSV 313


>ref|XP_002866911.1| hypothetical protein ARALYDRAFT_353023 [Arabidopsis lyrata subsp.
            lyrata] gi|297312747|gb|EFH43170.1| hypothetical protein
            ARALYDRAFT_353023 [Arabidopsis lyrata subsp. lyrata]
          Length = 309

 Score =  343 bits (879), Expect = 7e-92
 Identities = 171/249 (68%), Positives = 203/249 (81%)
 Frame = +1

Query: 304  DGKSNATWNKSRKSVRWSEELVTESSSYTSRTMNPSSIDVGGSNPYVAYAPAQSNPSSFN 483
            D     T + SRKSV W+ ELV+ES +   ++++ SS    GSNPYVA APA+++ +S  
Sbjct: 65   DRAPTRTASGSRKSVHWNPELVSESPAPDQKSLSSSS--AAGSNPYVARAPAETSDASL- 121

Query: 484  FKNSMDNVRDVLGRWGKKVGEATKKAEDLAGNTWQHLKTAPSLADAALGRIAQGTKVLAE 663
             K +M+ V+ VLGRWG++VGEA  KAE LAGNTWQHLKTAPS ADAA+GRIAQ TKVLAE
Sbjct: 122  -KETMETVKGVLGRWGRRVGEAAMKAESLAGNTWQHLKTAPSFADAAMGRIAQSTKVLAE 180

Query: 664  GGYEKIFQQTFDTVPEEQLQNSFACYVSTSAGPVMGVLYVSTSKLAYCSDNPLSYKVDDN 843
            GGYEKIF+QTF+TVPEEQLQNSFACY+STSAGPVMGVLY+ST+KLAYCSDNPLSYK    
Sbjct: 181  GGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYISTAKLAYCSDNPLSYKNSGQ 240

Query: 844  IEWSYYKVVIPLHQLKAVNSSSSRTNSAEKYIQIISVDNHEFWYMGFLNYDGAVRCLEEA 1023
             EWSYYKVVIPLHQLK+VN S+S  N AEKYIQ+ISVD+HEFW+MGFLNY+GAV  L++ 
Sbjct: 241  TEWSYYKVVIPLHQLKSVNPSASIVNPAEKYIQVISVDDHEFWFMGFLNYEGAVTALQDT 300

Query: 1024 LQSRNLHSV 1050
            LQ+  L SV
Sbjct: 301  LQAGALQSV 309


>ref|XP_004143450.1| PREDICTED: GLABRA2 expression modulator-like [Cucumis sativus]
            gi|449499787|ref|XP_004160917.1| PREDICTED: GLABRA2
            expression modulator-like [Cucumis sativus]
          Length = 294

 Score =  342 bits (876), Expect = 2e-91
 Identities = 174/239 (72%), Positives = 196/239 (82%)
 Frame = +1

Query: 334  SRKSVRWSEELVTESSSYTSRTMNPSSIDVGGSNPYVAYAPAQSNPSSFNFKNSMDNVRD 513
            S+K+VRWS ELVTES S  S +   ++      N Y A +P+ S  SS +FK ++D+V  
Sbjct: 63   SKKTVRWSTELVTESPSVASNSYGSNT------NTYAASSPS-SPSSSVSFKETVDSVWS 115

Query: 514  VLGRWGKKVGEATKKAEDLAGNTWQHLKTAPSLADAALGRIAQGTKVLAEGGYEKIFQQT 693
             LGRWGKKVGEATKKAEDLAGNTWQHLKT+PS ADAALGRIAQGTKVLAEGGYEKIFQQT
Sbjct: 116  ALGRWGKKVGEATKKAEDLAGNTWQHLKTSPSFADAALGRIAQGTKVLAEGGYEKIFQQT 175

Query: 694  FDTVPEEQLQNSFACYVSTSAGPVMGVLYVSTSKLAYCSDNPLSYKVDDNIEWSYYKVVI 873
            FDTVPEE+LQNSFACY+STSAGPVMGVLYVST+KLAYCSDNPLSYK D   EWSYYKVVI
Sbjct: 176  FDTVPEEKLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDNPLSYKSDGRTEWSYYKVVI 235

Query: 874  PLHQLKAVNSSSSRTNSAEKYIQIISVDNHEFWYMGFLNYDGAVRCLEEALQSRNLHSV 1050
            PL QLKAVN SSS  N +EKYIQ+IS DNHEFW+MGFLNY+GAV CL E  + + + SV
Sbjct: 236  PLQQLKAVNPSSSGMNPSEKYIQVISGDNHEFWFMGFLNYNGAVECLLEFPELQAMQSV 294


>ref|NP_565538.1| GLABRA2 expression modulator [Arabidopsis thaliana]
            gi|75160436|sp|Q8S8F8.1|GEM_ARATH RecName: Full=GLABRA2
            expression modulator gi|20197888|gb|AAM15301.1| Expressed
            protein [Arabidopsis thaliana]
            gi|145076288|gb|ABP35534.1| GL2 expression modulator
            [Arabidopsis thaliana] gi|330252217|gb|AEC07311.1|
            GLABRA2 expression modulator [Arabidopsis thaliana]
          Length = 299

 Score =  333 bits (855), Expect = 4e-89
 Identities = 166/243 (68%), Positives = 197/243 (81%)
 Frame = +1

Query: 322  TWNKSRKSVRWSEELVTESSSYTSRTMNPSSIDVGGSNPYVAYAPAQSNPSSFNFKNSMD 501
            T + S+KSV WS ELV+ S     +  + SS    GSNPY+A +PA+++ +S   K++M+
Sbjct: 62   TSSGSKKSVHWSPELVSGSQEPDQKAASSSS---AGSNPYIARSPAETSDASL--KDTME 116

Query: 502  NVRDVLGRWGKKVGEATKKAEDLAGNTWQHLKTAPSLADAALGRIAQGTKVLAEGGYEKI 681
             V+ VLGRWGK+V EA KK E LAGNTWQHL+TAPS ADAA+GRIAQ TKV AEGGYEKI
Sbjct: 117  TVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKI 176

Query: 682  FQQTFDTVPEEQLQNSFACYVSTSAGPVMGVLYVSTSKLAYCSDNPLSYKVDDNIEWSYY 861
            F+QTF+T PEEQL NSFACY+STSAGPVMGVLY+S++KLAYCSDNPLSYK  D  EWSYY
Sbjct: 177  FRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLSYKNGDQTEWSYY 236

Query: 862  KVVIPLHQLKAVNSSSSRTNSAEKYIQIISVDNHEFWYMGFLNYDGAVRCLEEALQSRNL 1041
            KVVIPLHQLKAVN S+S  N AEKYIQ+ISVDNHEFW+MGFLNYDGAV  L+++LQ+  L
Sbjct: 237  KVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQDSLQAGAL 296

Query: 1042 HSV 1050
             SV
Sbjct: 297  RSV 299


>ref|XP_002878618.1| hypothetical protein ARALYDRAFT_481108 [Arabidopsis lyrata subsp.
            lyrata] gi|297324457|gb|EFH54877.1| hypothetical protein
            ARALYDRAFT_481108 [Arabidopsis lyrata subsp. lyrata]
          Length = 291

 Score =  332 bits (851), Expect = 1e-88
 Identities = 167/243 (68%), Positives = 197/243 (81%)
 Frame = +1

Query: 322  TWNKSRKSVRWSEELVTESSSYTSRTMNPSSIDVGGSNPYVAYAPAQSNPSSFNFKNSMD 501
            T + S+KSV WS ELV+ S     +  + SS    GSNPY+A +PA++  SS    ++M+
Sbjct: 53   TSSGSKKSVHWSPELVSGSQEPDQKAASSSSS--AGSNPYIARSPAET--SSDASLDTME 108

Query: 502  NVRDVLGRWGKKVGEATKKAEDLAGNTWQHLKTAPSLADAALGRIAQGTKVLAEGGYEKI 681
            +V+ VLGRWGKKV EA KK E LAGNTWQHL+TAPS ADAA+GRIAQ TKV AEGGYEKI
Sbjct: 109  SVKGVLGRWGKKVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKI 168

Query: 682  FQQTFDTVPEEQLQNSFACYVSTSAGPVMGVLYVSTSKLAYCSDNPLSYKVDDNIEWSYY 861
            F+QTF+TVPEEQL NSFACY+STSAGPVMGV+Y+ST+KLAYCSDNPLSYK  D  EWSYY
Sbjct: 169  FRQTFETVPEEQLLNSFACYLSTSAGPVMGVVYISTAKLAYCSDNPLSYKNGDQTEWSYY 228

Query: 862  KVVIPLHQLKAVNSSSSRTNSAEKYIQIISVDNHEFWYMGFLNYDGAVRCLEEALQSRNL 1041
            KVVIPLHQLKAVN S+S  N AEKYIQ+ISVDNHEFW+MGFLNY+GAV  L+++LQ+  L
Sbjct: 229  KVVIPLHQLKAVNPSTSIVNPAEKYIQVISVDNHEFWFMGFLNYEGAVTSLQDSLQAGAL 288

Query: 1042 HSV 1050
             SV
Sbjct: 289  RSV 291


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