BLASTX nr result

ID: Panax21_contig00028768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028768
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274682.1| PREDICTED: cyclin-P3-1-like isoform 1 [Vitis...   317   4e-84
ref|XP_002274732.1| PREDICTED: cyclin-P3-1-like isoform 2 [Vitis...   317   4e-84
ref|XP_002520742.1| cyclin-dependent protein kinase, putative [R...   308   1e-81
ref|XP_002306774.1| predicted protein [Populus trichocarpa] gi|2...   294   3e-77
ref|XP_003554251.1| PREDICTED: cyclin-P3-1-like [Glycine max]         291   3e-76

>ref|XP_002274682.1| PREDICTED: cyclin-P3-1-like isoform 1 [Vitis vinifera]
          Length = 226

 Score =  317 bits (812), Expect = 4e-84
 Identities = 155/220 (70%), Positives = 186/220 (84%)
 Frame = -2

Query: 1131 LDMGTLALEVETLASDICFGLGLQDLGKRSPRNPRVLALLSSLLERCIQKNEMLMETTQV 952
            LDMGTLA++ +   SD+   LGL++LGK     PRVL LLSSLLER +QKNE L+ET Q+
Sbjct: 8    LDMGTLAIDDDIAGSDLYLALGLKELGKGVIGTPRVLLLLSSLLERSVQKNETLLETAQI 67

Query: 951  EEVLTIFHGSRVPSLGIQQYIDRIFKYSCCSPSCFVVAQIYVDRFIQRTNVHLTSLSVHR 772
            ++ +TIFHGSR P+L ++QYIDRIFKYS CSPSCFVVA IYVDRF+Q T+ HLTSL+VHR
Sbjct: 68   KDAITIFHGSRAPTLSVRQYIDRIFKYSGCSPSCFVVAHIYVDRFLQHTDAHLTSLNVHR 127

Query: 771  LLITSVMVAAKFIDDAFFNNAYFAKVGGVSTAEMNKLEMKFLFGLDFRLSVSLQTFGTYC 592
            LLITSVMVAAKFIDDAFFNNAY+AKVGGVSTAE+N+LEMKFLF LDFRL V+++TF +YC
Sbjct: 128  LLITSVMVAAKFIDDAFFNNAYYAKVGGVSTAELNRLEMKFLFSLDFRLQVTVETFRSYC 187

Query: 591  SQLEKEVSAGLPVERPIRACGIKDCWSNSEDSACAQTIGR 472
            SQL+KEV+ GL +ERP +ACGIK+ WS+ EDS CA TI R
Sbjct: 188  SQLDKEVAGGLQIERPFQACGIKESWSSKEDS-CASTIAR 226


>ref|XP_002274732.1| PREDICTED: cyclin-P3-1-like isoform 2 [Vitis vinifera]
          Length = 247

 Score =  317 bits (812), Expect = 4e-84
 Identities = 155/220 (70%), Positives = 186/220 (84%)
 Frame = -2

Query: 1131 LDMGTLALEVETLASDICFGLGLQDLGKRSPRNPRVLALLSSLLERCIQKNEMLMETTQV 952
            LDMGTLA++ +   SD+   LGL++LGK     PRVL LLSSLLER +QKNE L+ET Q+
Sbjct: 29   LDMGTLAIDDDIAGSDLYLALGLKELGKGVIGTPRVLLLLSSLLERSVQKNETLLETAQI 88

Query: 951  EEVLTIFHGSRVPSLGIQQYIDRIFKYSCCSPSCFVVAQIYVDRFIQRTNVHLTSLSVHR 772
            ++ +TIFHGSR P+L ++QYIDRIFKYS CSPSCFVVA IYVDRF+Q T+ HLTSL+VHR
Sbjct: 89   KDAITIFHGSRAPTLSVRQYIDRIFKYSGCSPSCFVVAHIYVDRFLQHTDAHLTSLNVHR 148

Query: 771  LLITSVMVAAKFIDDAFFNNAYFAKVGGVSTAEMNKLEMKFLFGLDFRLSVSLQTFGTYC 592
            LLITSVMVAAKFIDDAFFNNAY+AKVGGVSTAE+N+LEMKFLF LDFRL V+++TF +YC
Sbjct: 149  LLITSVMVAAKFIDDAFFNNAYYAKVGGVSTAELNRLEMKFLFSLDFRLQVTVETFRSYC 208

Query: 591  SQLEKEVSAGLPVERPIRACGIKDCWSNSEDSACAQTIGR 472
            SQL+KEV+ GL +ERP +ACGIK+ WS+ EDS CA TI R
Sbjct: 209  SQLDKEVAGGLQIERPFQACGIKESWSSKEDS-CASTIAR 247


>ref|XP_002520742.1| cyclin-dependent protein kinase, putative [Ricinus communis]
            gi|223540127|gb|EEF41704.1| cyclin-dependent protein
            kinase, putative [Ricinus communis]
          Length = 219

 Score =  308 bits (790), Expect = 1e-81
 Identities = 154/219 (70%), Positives = 178/219 (81%), Gaps = 1/219 (0%)
 Frame = -2

Query: 1125 MGTLALEVETLASDICFGLGLQDLGKRSPRNPRVLALLSSLLERCIQKNEMLMETTQVEE 946
            MGTLAL+ E +  D+   LGL+ LGKR    PR L LLSSLLER +QKNEML+ETTQ+ +
Sbjct: 1    MGTLALDTENVDLDVYLTLGLKALGKRILGTPRALTLLSSLLERSVQKNEMLLETTQIND 60

Query: 945  VLTIFHGSRVPSLGIQQYIDRIFKYSCCSPSCFVVAQIYVDRFIQRTNVHLTSLSVHRLL 766
              T FHGSR P++ I+QYIDRIFKYS CSPSCF+VA IYVDRFIQ T++HLTSL+VHRLL
Sbjct: 61   SRTEFHGSRAPTVSIRQYIDRIFKYSGCSPSCFIVAHIYVDRFIQNTDIHLTSLNVHRLL 120

Query: 765  ITSVMVAAKFIDDAFFNNAYFAKVGGVSTAEMNKLEMKFLFGLDFRLSVSLQTFGTYCSQ 586
            ITSVMVAAKFIDDAFFNNAY+AKVGGVST E+NKLEMKFLF +DFRL VS+ TFG YCSQ
Sbjct: 121  ITSVMVAAKFIDDAFFNNAYYAKVGGVSTEELNKLEMKFLFSIDFRLQVSVNTFGRYCSQ 180

Query: 585  LEKEVSAGLPVERPIRACGIKDCWSNSEDSA-CAQTIGR 472
            LEKE + G  +ERPI+ C IK+ WSN +DS  CA TI R
Sbjct: 181  LEKEAAEGHQIERPIQVCRIKESWSNKDDSTPCAPTIAR 219


>ref|XP_002306774.1| predicted protein [Populus trichocarpa] gi|222856223|gb|EEE93770.1|
            predicted protein [Populus trichocarpa]
          Length = 219

 Score =  294 bits (752), Expect = 3e-77
 Identities = 143/219 (65%), Positives = 183/219 (83%), Gaps = 1/219 (0%)
 Frame = -2

Query: 1125 MGTLALEVETLASDICFGLGLQDLGKRSPRNPRVLALLSSLLERCIQKNEMLMETTQVEE 946
            M TL+ +  ++ SDI   LGL++L K   R+PRVL LLSSLL+R +QKNEML+ETTQ+++
Sbjct: 1    METLSPDSGSMDSDIYRTLGLEELRKGVLRSPRVLMLLSSLLDRSVQKNEMLLETTQIKD 60

Query: 945  VLTIFHGSRVPSLGIQQYIDRIFKYSCCSPSCFVVAQIYVDRFIQRTNVHLTSLSVHRLL 766
            V+TIFHG R P++ I+ Y+DRIFKYS CSPSCFVVA IY+DRF+Q+T++HLT+L+VHRLL
Sbjct: 61   VVTIFHGLRPPTVSIRNYVDRIFKYSACSPSCFVVAHIYMDRFLQQTDIHLTALNVHRLL 120

Query: 765  ITSVMVAAKFIDDAFFNNAYFAKVGGVSTAEMNKLEMKFLFGLDFRLSVSLQTFGTYCSQ 586
            ITSVM+AAKF+DDAFFNNAY+AKVGGVST E+N+LEMKFLF +DFRL V++ TFG +C Q
Sbjct: 121  ITSVMIAAKFVDDAFFNNAYYAKVGGVSTEELNRLEMKFLFSIDFRLQVNVNTFGKHCYQ 180

Query: 585  LEKEVSAGLPVERPIRACGIKDCWSNSEDS-ACAQTIGR 472
            LEKE   GL +ERPI+AC IK+ WS+ +DS AC+ TI R
Sbjct: 181  LEKESVGGLQIERPIQACRIKESWSSKDDSTACSSTIAR 219


>ref|XP_003554251.1| PREDICTED: cyclin-P3-1-like [Glycine max]
          Length = 246

 Score =  291 bits (744), Expect = 3e-76
 Identities = 140/220 (63%), Positives = 176/220 (80%)
 Frame = -2

Query: 1131 LDMGTLALEVETLASDICFGLGLQDLGKRSPRNPRVLALLSSLLERCIQKNEMLMETTQV 952
            LDMG+LALE E + SDI   LGL++  K     PRVL+LLSSLLER +Q+NE  +E   +
Sbjct: 28   LDMGSLALETEDVISDIYLSLGLKESDK-GVGGPRVLSLLSSLLERSVQRNETSLEAKHI 86

Query: 951  EEVLTIFHGSRVPSLGIQQYIDRIFKYSCCSPSCFVVAQIYVDRFIQRTNVHLTSLSVHR 772
            ++V+T+FHG R P+L +++YIDRIFKYS CSPSCFVVA IYVDRFIQ T + LTSL+VHR
Sbjct: 87   KDVVTVFHGLRAPTLSVRKYIDRIFKYSGCSPSCFVVAHIYVDRFIQHTEIKLTSLNVHR 146

Query: 771  LLITSVMVAAKFIDDAFFNNAYFAKVGGVSTAEMNKLEMKFLFGLDFRLSVSLQTFGTYC 592
            LLITS+M+AAKFIDDAF+NNAY+AKVGGVST+E+N+ EM FLFG+DFRL V ++TFG YC
Sbjct: 147  LLITSIMLAAKFIDDAFYNNAYYAKVGGVSTSELNRFEMSFLFGIDFRLQVGVETFGRYC 206

Query: 591  SQLEKEVSAGLPVERPIRACGIKDCWSNSEDSACAQTIGR 472
             QLEKE +  + +ERP++AC IK+ WSN +D  CA TI R
Sbjct: 207  RQLEKEAAEVVQIERPMQACRIKESWSNKDDPTCASTIAR 246


Top