BLASTX nr result

ID: Panax21_contig00028733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028733
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310032.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
gb|AAM61676.1| unknown [Arabidopsis thaliana]                         132   4e-29
ref|XP_002447196.1| hypothetical protein SORBIDRAFT_06g030280 [S...   132   5e-29
emb|CBI21511.3| unnamed protein product [Vitis vinifera]              130   2e-28
ref|NP_201288.1| programmed cell death 2 C-terminal domain-conta...   130   2e-28

>ref|XP_002310032.1| predicted protein [Populus trichocarpa] gi|222852935|gb|EEE90482.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score =  139 bits (350), Expect = 3e-31
 Identities = 67/119 (56%), Positives = 79/119 (66%)
 Frame = +3

Query: 189 GEVILGMPGPWADDYHEASDHYTTKFGGLPDWPIPNIIVKPDLLECRSCGTNLLLVAQIY 368
           G V+LGMPGPWADD  E SD YT+K GGLPDWP P   + P+LL C +CG+ L LVAQ+Y
Sbjct: 5   GGVLLGMPGPWADDNREPSDLYTSKIGGLPDWPFPAENLAPNLLICGACGSKLCLVAQVY 64

Query: 369 APVSSKTLTIEERQIFVFGCISATCGSTPESWVVLRVQRCISSQVSKTHNHMGAPLPEP 545
           AP+SS TL IE+R I VFGCI   CG+TP SW  LRVQ+  S + S        P   P
Sbjct: 65  APISSGTLNIEDRTILVFGCIIPNCGNTPLSWRALRVQKVDSERESSVSTEEVVPSTPP 123


>gb|AAM61676.1| unknown [Arabidopsis thaliana]
          Length = 378

 Score =  132 bits (332), Expect = 4e-29
 Identities = 57/110 (51%), Positives = 81/110 (73%), Gaps = 1/110 (0%)
 Frame = +3

Query: 186 MGEVILGMPGPWADDYHEASDHYTTKFGGLPDWP-IPNIIVKPDLLECRSCGTNLLLVAQ 362
           M E++LG+PG WA+D  E SDHYTTK GGLPDWP IP+  +KP+LL C SCG+ L LVAQ
Sbjct: 1   MVEILLGLPGKWAEDELEPSDHYTTKIGGLPDWPPIPDDALKPELLNCCSCGSKLPLVAQ 60

Query: 363 IYAPVSSKTLTIEERQIFVFGCISATCGSTPESWVVLRVQRCISSQVSKT 512
           +YAP+S++ L I+ER +++FGC+   CG++ +SW    +Q+ I+ +   T
Sbjct: 61  VYAPISTEILDIQERTLYIFGCLMPKCGTSEQSWRAFSIQKAIAKEKGST 110


>ref|XP_002447196.1| hypothetical protein SORBIDRAFT_06g030280 [Sorghum bicolor]
           gi|241938379|gb|EES11524.1| hypothetical protein
           SORBIDRAFT_06g030280 [Sorghum bicolor]
          Length = 364

 Score =  132 bits (331), Expect = 5e-29
 Identities = 59/101 (58%), Positives = 75/101 (74%)
 Frame = +3

Query: 186 MGEVILGMPGPWADDYHEASDHYTTKFGGLPDWPIPNIIVKPDLLECRSCGTNLLLVAQI 365
           M EV LG+PGPWA DY E +DHYTTK GG+PDWP  ++ +KP+ L+C  CGT L LVAQ+
Sbjct: 1   MAEVHLGLPGPWAADYREKADHYTTKIGGVPDWPTGDMGIKPETLQCSLCGTKLCLVAQV 60

Query: 366 YAPVSSKTLTIEERQIFVFGCISATCGSTPESWVVLRVQRC 488
           +APV+   L IEER I+V  C++  CG  P+SW VLRVQ+C
Sbjct: 61  HAPVAK--LNIEERIIYVLVCLTPECGPKPQSWKVLRVQKC 99


>emb|CBI21511.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  130 bits (326), Expect = 2e-28
 Identities = 60/104 (57%), Positives = 75/104 (72%), Gaps = 4/104 (3%)
 Frame = +3

Query: 186 MGEVIL---GMPGPWADDYHEASDHYTTKFGGLPDWPIPNIIV-KPDLLECRSCGTNLLL 353
           MG+ +L   GMPGPWA++  E SDHYTTK GGLPDWPIP ++  KP LL C  C  +L L
Sbjct: 1   MGDAVLELVGMPGPWAENDSEPSDHYTTKIGGLPDWPIPQLLSSKPHLLRCAICEKDLCL 60

Query: 354 VAQIYAPVSSKTLTIEERQIFVFGCISATCGSTPESWVVLRVQR 485
           VAQ+YAP+S K L I+ER I+V GC++ TCG  P SW  +RVQ+
Sbjct: 61  VAQVYAPISGKNLNIDERVIYVLGCLTPTCGRNPCSWRAIRVQK 104


>ref|NP_201288.1| programmed cell death 2 C-terminal domain-containing protein
           [Arabidopsis thaliana]
           gi|15724302|gb|AAL06544.1|AF412091_1 AT5g64830/MXK3_5
           [Arabidopsis thaliana] gi|8843747|dbj|BAA97295.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|109946415|gb|ABG48386.1| At5g64830 [Arabidopsis
           thaliana] gi|332010575|gb|AED97958.1| programmed cell
           death 2 C-terminal domain-containing protein
           [Arabidopsis thaliana]
          Length = 380

 Score =  130 bits (326), Expect = 2e-28
 Identities = 55/107 (51%), Positives = 79/107 (73%), Gaps = 1/107 (0%)
 Frame = +3

Query: 195 VILGMPGPWADDYHEASDHYTTKFGGLPDWP-IPNIIVKPDLLECRSCGTNLLLVAQIYA 371
           ++LG+PG WA+D  E SDHYTTK GGLPDWP IP+  +KP+LL C SCG+ L LVAQ+YA
Sbjct: 4   ILLGLPGKWAEDELEPSDHYTTKIGGLPDWPPIPDDALKPELLNCCSCGSKLSLVAQVYA 63

Query: 372 PVSSKTLTIEERQIFVFGCISATCGSTPESWVVLRVQRCISSQVSKT 512
           P+S++ L I+ER +++FGC+   CG++ +SW    +Q+ I+ +   T
Sbjct: 64  PISTEILDIQERTLYIFGCLMPKCGTSEQSWRAFSIQKAIAKEKGST 110


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