BLASTX nr result
ID: Panax21_contig00028711
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00028711
(611 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247... 284 8e-75
ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II tra... 277 9e-73
ref|XP_003542894.1| PREDICTED: uncharacterized protein LOC100812... 277 9e-73
ref|XP_002311827.1| predicted protein [Populus trichocarpa] gi|2... 276 2e-72
dbj|BAC41797.1| unknown protein [Arabidopsis thaliana] 276 2e-72
>ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247741 [Vitis vinifera]
gi|297736973|emb|CBI26174.3| unnamed protein product
[Vitis vinifera]
Length = 1305
Score = 284 bits (727), Expect = 8e-75
Identities = 149/205 (72%), Positives = 164/205 (80%), Gaps = 2/205 (0%)
Frame = +1
Query: 1 LVAGGSSQATLPLPLAAFVSLTITYKLDKASQRFLNLAGPALESLAAGCPWPCMPIVASL 180
L AGG+S ATLPLPLAAF SLTITYK+D+ASQRFLNLAGPALE+LAA CPWPCMPIVASL
Sbjct: 931 LAAGGNSPATLPLPLAAFASLTITYKIDRASQRFLNLAGPALEALAADCPWPCMPIVASL 990
Query: 181 WTQKAKRWSDFLVFSASRTVFLHNNDAVVQLLKSCFTATLGLKXXXXXXXXXXXXXXXXX 360
WTQKAKRWSDFLVFSASRTVFLHN+DAVVQLLKSCFTATLGLK
Sbjct: 991 WTQKAKRWSDFLVFSASRTVFLHNSDAVVQLLKSCFTATLGLKTTPISSNGGVGALLGHG 1050
Query: 361 FRSHFYGEISPVAPGILYLRAYQSIRDIMFMREEIVSVLMQSVREIVRNGHCTERLKKLK 540
F SHF G ISPVAPGILYLRAY+SIRD++FM EEIVS+LM VREI + ER +KLK
Sbjct: 1051 FGSHFCGGISPVAPGILYLRAYRSIRDVVFMAEEIVSLLMHFVREIASSQLSGERSEKLK 1110
Query: 541 --KNGMKYGQVSLAVSMTKVKLAAS 609
KN MKYGQ+SL ++ +VKL AS
Sbjct: 1111 KAKNEMKYGQISLGAALARVKLIAS 1135
>ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Cucumis sativus]
Length = 1311
Score = 277 bits (709), Expect = 9e-73
Identities = 147/205 (71%), Positives = 162/205 (79%), Gaps = 2/205 (0%)
Frame = +1
Query: 1 LVAGGSSQATLPLPLAAFVSLTITYKLDKASQRFLNLAGPALESLAAGCPWPCMPIVASL 180
L AGGSS ATLPLPLAAFVSLTITYK+D+ASQRFLNLAGPALESLAAGCPWPCMPIVASL
Sbjct: 937 LAAGGSSPATLPLPLAAFVSLTITYKIDRASQRFLNLAGPALESLAAGCPWPCMPIVASL 996
Query: 181 WTQKAKRWSDFLVFSASRTVFLHNNDAVVQLLKSCFTATLGLKXXXXXXXXXXXXXXXXX 360
WTQKAKRWSDFLVFSASRTVFL N DAVVQLLKSCFTATLGL
Sbjct: 997 WTQKAKRWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSSNGGVGALLGHG 1056
Query: 361 FRSHFYGEISPVAPGILYLRAYQSIRDIMFMREEIVSVLMQSVREIVRNGHCTERLKKLK 540
F SHF G ISPVAPGIL+LR Y+SIRD+ + EEI+S+LM SVREI NG ++ KLK
Sbjct: 1057 FGSHFCGGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVREIACNGAGKDKSGKLK 1116
Query: 541 --KNGMKYGQVSLAVSMTKVKLAAS 609
N +YGQ+SL+ +MT+VKLAAS
Sbjct: 1117 TTNNAKRYGQISLSSAMTQVKLAAS 1141
>ref|XP_003542894.1| PREDICTED: uncharacterized protein LOC100812937 [Glycine max]
Length = 1305
Score = 277 bits (709), Expect = 9e-73
Identities = 144/205 (70%), Positives = 163/205 (79%), Gaps = 2/205 (0%)
Frame = +1
Query: 1 LVAGGSSQATLPLPLAAFVSLTITYKLDKASQRFLNLAGPALESLAAGCPWPCMPIVASL 180
L +G S ATLPLPLAAF SLTITYK+DKAS+RFLNLAG LESLAAGCPWPCMPIVASL
Sbjct: 931 LASGDSCPATLPLPLAAFTSLTITYKVDKASERFLNLAGQTLESLAAGCPWPCMPIVASL 990
Query: 181 WTQKAKRWSDFLVFSASRTVFLHNNDAVVQLLKSCFTATLGLKXXXXXXXXXXXXXXXXX 360
WT KAKRWSDFL+FSASRTVFLHN+DA VQLLKSCFTATLG+
Sbjct: 991 WTLKAKRWSDFLIFSASRTVFLHNSDAAVQLLKSCFTATLGMNSSPISSSGGVGALLGHG 1050
Query: 361 FRSHFYGEISPVAPGILYLRAYQSIRDIMFMREEIVSVLMQSVREIVRNGHCTERLKKLK 540
F+ H G + PVAPGILYLRAY SIRD++F+ EEIVS+LM SVREIV +G +RL+KLK
Sbjct: 1051 FKYHLCGGLCPVAPGILYLRAYGSIRDVVFLTEEIVSILMHSVREIVCSGLPRDRLEKLK 1110
Query: 541 --KNGMKYGQVSLAVSMTKVKLAAS 609
K+G+KYGQVSLA SMT+VKLAA+
Sbjct: 1111 ANKDGIKYGQVSLAASMTRVKLAAA 1135
>ref|XP_002311827.1| predicted protein [Populus trichocarpa] gi|222851647|gb|EEE89194.1|
predicted protein [Populus trichocarpa]
Length = 1304
Score = 276 bits (706), Expect = 2e-72
Identities = 146/205 (71%), Positives = 162/205 (79%), Gaps = 2/205 (0%)
Frame = +1
Query: 1 LVAGGSSQATLPLPLAAFVSLTITYKLDKASQRFLNLAGPALESLAAGCPWPCMPIVASL 180
L AG SS AT+PLPLAAFVSLTITYK+DKAS+RFLNLAGPALESLAAGCPWPCMPIVASL
Sbjct: 934 LAAGVSSLATIPLPLAAFVSLTITYKIDKASERFLNLAGPALESLAAGCPWPCMPIVASL 993
Query: 181 WTQKAKRWSDFLVFSASRTVFLHNNDAVVQLLKSCFTATLGLKXXXXXXXXXXXXXXXXX 360
WTQKAKRW DFLVFSASRTVFLHNNDAV QLLKSCF+ATLG
Sbjct: 994 WTQKAKRWFDFLVFSASRTVFLHNNDAVFQLLKSCFSATLGPNAAAISSNGGVGALLGHG 1053
Query: 361 FRSHFYGEISPVAPGILYLRAYQSIRDIMFMREEIVSVLMQSVREIVRNGHCTERLKKLK 540
F SHF G ISPVAPGILYLR Y+SIRDI+ + E+I+S++M SVREI G ERL+KLK
Sbjct: 1054 FGSHFSGGISPVAPGILYLRVYRSIRDIVSLMEDIISLMMLSVREIACTGLPRERLEKLK 1113
Query: 541 --KNGMKYGQVSLAVSMTKVKLAAS 609
KNG++ GQ SL +MT+VKLAAS
Sbjct: 1114 RSKNGLRCGQFSLTAAMTRVKLAAS 1138
>dbj|BAC41797.1| unknown protein [Arabidopsis thaliana]
Length = 1309
Score = 276 bits (706), Expect = 2e-72
Identities = 142/205 (69%), Positives = 163/205 (79%), Gaps = 2/205 (0%)
Frame = +1
Query: 1 LVAGGSSQATLPLPLAAFVSLTITYKLDKASQRFLNLAGPALESLAAGCPWPCMPIVASL 180
L GGSS ATLPLPLAAFVSLTITYK+DKAS+RFLNLAGPALE LAAGCPWPCMPIVASL
Sbjct: 934 LAPGGSSPATLPLPLAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASL 993
Query: 181 WTQKAKRWSDFLVFSASRTVFLHNNDAVVQLLKSCFTATLGLKXXXXXXXXXXXXXXXXX 360
WTQKAKRW DFLVFSASRTVFLHN DAV+QLL++CF+ATLGL
Sbjct: 994 WTQKAKRWFDFLVFSASRTVFLHNQDAVIQLLRNCFSATLGLNAAPMSNDGGVGALLGHG 1053
Query: 361 FRSHFYGEISPVAPGILYLRAYQSIRDIMFMREEIVSVLMQSVREIVRNGHCTERLKKLK 540
F SHFYG ISPVAPGILYLR Y+++RD + + EEI+S+L+ SV +I +N E+L+KLK
Sbjct: 1054 FGSHFYGGISPVAPGILYLRMYRALRDTVSVSEEILSLLIHSVEDIAQNRLSKEKLEKLK 1113
Query: 541 --KNGMKYGQVSLAVSMTKVKLAAS 609
KNG +YGQ SLA +MT+VKLAAS
Sbjct: 1114 TVKNGSRYGQSSLATAMTQVKLAAS 1138