BLASTX nr result

ID: Panax21_contig00028707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028707
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511794.1| ubiquitin-protein ligase, putative [Ricinus ...   231   5e-59
ref|XP_003534592.1| PREDICTED: vacuolar protein 8-like [Glycine ...   220   1e-55
ref|XP_002320763.1| predicted protein [Populus trichocarpa] gi|2...   219   1e-55
gb|AER13165.1| armadillo [Phaseolus vulgaris]                         219   2e-55
ref|XP_002269981.1| PREDICTED: uncharacterized protein LOC100250...   216   2e-54

>ref|XP_002511794.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223548974|gb|EEF50463.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 561

 Score =  231 bits (589), Expect = 5e-59
 Identities = 118/134 (88%), Positives = 124/134 (92%)
 Frame = -2

Query: 403 KLELIPSRLSDLSSHPCFSKNALCKEQLQAVSKTLTEAIVLAEMCVKEKYEGKLRMQSDL 224
           KLE IPS LSDLSSHPCFSKNALCKEQLQAVSKTL EAI LAE+CV EKYEGKLRMQSDL
Sbjct: 51  KLEQIPSHLSDLSSHPCFSKNALCKEQLQAVSKTLKEAIELAELCVGEKYEGKLRMQSDL 110

Query: 223 DALSGKLDLNLRDCGLLIKTGVLGEVTMPLAVGSSTTEPEAATHFSIRELLARLQIGHLE 44
           DALSGKLDLNLRDCGLLIKTGVLGEVT+PLAV  S+TEPEAA H +IREL ARLQIGHLE
Sbjct: 111 DALSGKLDLNLRDCGLLIKTGVLGEVTLPLAVAGSSTEPEAAIHSNIRELFARLQIGHLE 170

Query: 43  AKHKALDSLVEIMQ 2
           AKHKALDSLVE+M+
Sbjct: 171 AKHKALDSLVEVMK 184


>ref|XP_003534592.1| PREDICTED: vacuolar protein 8-like [Glycine max]
          Length = 559

 Score =  220 bits (560), Expect = 1e-55
 Identities = 112/134 (83%), Positives = 122/134 (91%)
 Frame = -2

Query: 403 KLELIPSRLSDLSSHPCFSKNALCKEQLQAVSKTLTEAIVLAEMCVKEKYEGKLRMQSDL 224
           KLE IP RLSDLSSHPCFSKNALCKEQLQAVSKTL EAI LAE+C+KEKYEGKLRMQSDL
Sbjct: 49  KLEQIPLRLSDLSSHPCFSKNALCKEQLQAVSKTLGEAIELAELCLKEKYEGKLRMQSDL 108

Query: 223 DALSGKLDLNLRDCGLLIKTGVLGEVTMPLAVGSSTTEPEAATHFSIRELLARLQIGHLE 44
           D+LSGKLDLNLRDCGLLIKTGVLGE T+PLAV SS  E + AT+ +IRELLARLQIGHLE
Sbjct: 109 DSLSGKLDLNLRDCGLLIKTGVLGEATLPLAVSSSVAESDVATYNNIRELLARLQIGHLE 168

Query: 43  AKHKALDSLVEIMQ 2
           AKH+ALDS+VE M+
Sbjct: 169 AKHRALDSVVEAMK 182


>ref|XP_002320763.1| predicted protein [Populus trichocarpa] gi|222861536|gb|EEE99078.1|
           predicted protein [Populus trichocarpa]
          Length = 560

 Score =  219 bits (559), Expect = 1e-55
 Identities = 112/134 (83%), Positives = 121/134 (90%)
 Frame = -2

Query: 403 KLELIPSRLSDLSSHPCFSKNALCKEQLQAVSKTLTEAIVLAEMCVKEKYEGKLRMQSDL 224
           KLE IPSRLSDLSSHPCF KNALCKEQLQAVSKTL EAI LA +C+ E Y GKLRMQSDL
Sbjct: 50  KLEQIPSRLSDLSSHPCFFKNALCKEQLQAVSKTLKEAIELAGLCMGENYGGKLRMQSDL 109

Query: 223 DALSGKLDLNLRDCGLLIKTGVLGEVTMPLAVGSSTTEPEAATHFSIRELLARLQIGHLE 44
           DALSGKLDLNLRDCGLLIKTGVLGE T+PLAV SS+TEPEAA H + RELLARLQIGHLE
Sbjct: 110 DALSGKLDLNLRDCGLLIKTGVLGEATLPLAVASSSTEPEAAIHSNTRELLARLQIGHLE 169

Query: 43  AKHKALDSLVEIMQ 2
           AKH+ALD+LVE+M+
Sbjct: 170 AKHRALDTLVEVMK 183


>gb|AER13165.1| armadillo [Phaseolus vulgaris]
          Length = 556

 Score =  219 bits (557), Expect = 2e-55
 Identities = 113/134 (84%), Positives = 122/134 (91%)
 Frame = -2

Query: 403 KLELIPSRLSDLSSHPCFSKNALCKEQLQAVSKTLTEAIVLAEMCVKEKYEGKLRMQSDL 224
           KLE IPSRLSDLSSHPCFSKNALCKEQLQAVSKTL EAI LAE+C+KEKYEGKLRMQSDL
Sbjct: 47  KLEQIPSRLSDLSSHPCFSKNALCKEQLQAVSKTLGEAIELAELCMKEKYEGKLRMQSDL 106

Query: 223 DALSGKLDLNLRDCGLLIKTGVLGEVTMPLAVGSSTTEPEAATHFSIRELLARLQIGHLE 44
           DAL+GKLDLNLRDCGLLIKTGVLGE T+PLAV SS  E + A H +IRELLARLQIGHLE
Sbjct: 107 DALTGKLDLNLRDCGLLIKTGVLGEATLPLAVSSSVAESDVAAH-NIRELLARLQIGHLE 165

Query: 43  AKHKALDSLVEIMQ 2
           AKH+ALDS+VE M+
Sbjct: 166 AKHQALDSVVEAMK 179


>ref|XP_002269981.1| PREDICTED: uncharacterized protein LOC100250612 [Vitis vinifera]
          Length = 560

 Score =  216 bits (550), Expect = 2e-54
 Identities = 108/134 (80%), Positives = 116/134 (86%)
 Frame = -2

Query: 403 KLELIPSRLSDLSSHPCFSKNALCKEQLQAVSKTLTEAIVLAEMCVKEKYEGKLRMQSDL 224
           KLE IPS LSDLSSHPCFSKN LCKEQLQAV +TL E I LAE+C+KEKYEGKLRMQSDL
Sbjct: 50  KLEQIPSCLSDLSSHPCFSKNTLCKEQLQAVLRTLKETIELAELCIKEKYEGKLRMQSDL 109

Query: 223 DALSGKLDLNLRDCGLLIKTGVLGEVTMPLAVGSSTTEPEAATHFSIRELLARLQIGHLE 44
           D L GKLDLNLRDCGLL+KTGVLGE  MPL V  S+ EPEA TH +IRE LARLQIGHLE
Sbjct: 110 DGLIGKLDLNLRDCGLLVKTGVLGEAMMPLTVAGSSAEPEAGTHSNIREFLARLQIGHLE 169

Query: 43  AKHKALDSLVEIMQ 2
           AKHKALDSLVE+M+
Sbjct: 170 AKHKALDSLVEVMK 183


Top