BLASTX nr result

ID: Panax21_contig00028698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028698
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyas...   524   e-146
ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|2...   514   e-143
emb|CBI19298.3| unnamed protein product [Vitis vinifera]              513   e-143
ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533...   506   e-141
ref|XP_003603709.1| Rhamnogalacturonate lyase [Medicago truncatu...   505   e-141

>ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyase B-like isoform 1 [Vitis
            vinifera]
          Length = 643

 Score =  524 bits (1350), Expect = e-146
 Identities = 247/304 (81%), Positives = 271/304 (89%)
 Frame = +3

Query: 93   IKGNTFKVIVETEEQVEVSFSRAWDPSLQGKLVPLNIDKRFILLRGCSGFYSYAIYEHLG 272
            IKG  F+VIVE EEQVE+SF+R WDPSL+GKLVPLNIDKRFI+LRG SGFYSYAIYEHL 
Sbjct: 73   IKGTNFRVIVENEEQVEISFTRMWDPSLEGKLVPLNIDKRFIMLRGSSGFYSYAIYEHL- 131

Query: 273  STEWPAFSLGETRIAFKLRKDKFHYMAVANNRQRYMPLPDDRLPGRGQPLAYPEAVLMVN 452
              EWPAF+L ETRIAFKLRKDKFHYMA+A+NRQR+MPLPDDRLPGRGQPLAYPEAVL+VN
Sbjct: 132  -KEWPAFTLAETRIAFKLRKDKFHYMAMADNRQRFMPLPDDRLPGRGQPLAYPEAVLLVN 190

Query: 453  PVEPELKGEVDDKYQYSCENKDLRVHGWISVDPPVGFWQIIPSDEFQTGGPVKQNLSSHV 632
            PVEPE KGEVDDKYQYSC+NKD RVHGW+ ++PPVGFWQI PSDEF+TGGPVKQNL+SHV
Sbjct: 191  PVEPEFKGEVDDKYQYSCDNKDNRVHGWVCLEPPVGFWQITPSDEFRTGGPVKQNLTSHV 250

Query: 633  GPTSLAMFLSAHYAGEDLCPKFELGEPWKKVFGPVFIYLNSVMDENDPLTLWDDAKNQML 812
            GPT+LAMF SAHYAGE L PKF   EPWKKVFGPVFIY+NSV  + DP  LW+DAK QM 
Sbjct: 251  GPTTLAMFHSAHYAGEPLVPKFGPDEPWKKVFGPVFIYVNSVFGDGDPFWLWEDAKEQMT 310

Query: 813  VEVQSWPYNFPESEDFPSSDQRGNVSGRLLVKDRYIDGDSIPANGAYVGLAPPGDVGSWQ 992
            +EVQSWPY+FP SEDFPSSDQRGNVSGRLLV+D YI  D I A+ AYVGLAPPGDVGSWQ
Sbjct: 311  IEVQSWPYSFPASEDFPSSDQRGNVSGRLLVQDGYISDDYILASCAYVGLAPPGDVGSWQ 370

Query: 993  RECK 1004
            RECK
Sbjct: 371  RECK 374


>ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|222842838|gb|EEE80385.1|
            predicted protein [Populus trichocarpa]
          Length = 626

 Score =  514 bits (1324), Expect = e-143
 Identities = 242/304 (79%), Positives = 267/304 (87%)
 Frame = +3

Query: 93   IKGNTFKVIVETEEQVEVSFSRAWDPSLQGKLVPLNIDKRFILLRGCSGFYSYAIYEHLG 272
            IKG +FKVIVETEEQVEVSF+R WD S +GKLVPLNIDKRF++LRG SGFYSYAIYEHL 
Sbjct: 57   IKGRSFKVIVETEEQVEVSFTRTWDSSQEGKLVPLNIDKRFVMLRGSSGFYSYAIYEHL- 115

Query: 273  STEWPAFSLGETRIAFKLRKDKFHYMAVANNRQRYMPLPDDRLPGRGQPLAYPEAVLMVN 452
              EWP F+LGETRIAFKLRKDKFHYM  A+NRQRYMPLPDDRLP RGQPLAYPEAV +VN
Sbjct: 116  -KEWPGFNLGETRIAFKLRKDKFHYMIAADNRQRYMPLPDDRLPPRGQPLAYPEAVQLVN 174

Query: 453  PVEPELKGEVDDKYQYSCENKDLRVHGWISVDPPVGFWQIIPSDEFQTGGPVKQNLSSHV 632
            PVEP+ KGEVDDKYQYS ENKD +VHGWI +DP VGFWQI PSDEF++GGPVKQNL+SHV
Sbjct: 175  PVEPDFKGEVDDKYQYSIENKDNKVHGWICMDPAVGFWQITPSDEFRSGGPVKQNLTSHV 234

Query: 633  GPTSLAMFLSAHYAGEDLCPKFELGEPWKKVFGPVFIYLNSVMDENDPLTLWDDAKNQML 812
            GPT+L MFLSAHY+GEDL PK   GE WKKVFGPVF+Y NSVMD +DPL+LW+DAK QML
Sbjct: 235  GPTTLVMFLSAHYSGEDLVPKIGAGEAWKKVFGPVFMYFNSVMDGDDPLSLWEDAKLQML 294

Query: 813  VEVQSWPYNFPESEDFPSSDQRGNVSGRLLVKDRYIDGDSIPANGAYVGLAPPGDVGSWQ 992
            +EVQSWPY FP SED+  SDQRGNVSGRLLV+DR++  D  PANGAYVGLA PGDVGSWQ
Sbjct: 295  IEVQSWPYGFPASEDYQKSDQRGNVSGRLLVRDRFVSDDYTPANGAYVGLALPGDVGSWQ 354

Query: 993  RECK 1004
            RECK
Sbjct: 355  RECK 358


>emb|CBI19298.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score =  513 bits (1322), Expect = e-143
 Identities = 246/316 (77%), Positives = 270/316 (85%), Gaps = 12/316 (3%)
 Frame = +3

Query: 93   IKGNTFKVIVETEEQVEVSFSRAWDPSLQGKLVPLNIDKRFILLRGCSGFYSYAIYEHLG 272
            IKG  F+VIVE EEQVE+SF+R WDPSL+GKLVPLNIDKRFI+LRG SGFYSYAIYEHL 
Sbjct: 73   IKGTNFRVIVENEEQVEISFTRMWDPSLEGKLVPLNIDKRFIMLRGSSGFYSYAIYEHL- 131

Query: 273  STEWPAFSLGETRIAFKLRKDK------------FHYMAVANNRQRYMPLPDDRLPGRGQ 416
              EWPAF+L ETRIAFKLRKD             FHYMA+A+NRQR+MPLPDDRLPGRGQ
Sbjct: 132  -KEWPAFTLAETRIAFKLRKDNTVLKGKMKKHRLFHYMAMADNRQRFMPLPDDRLPGRGQ 190

Query: 417  PLAYPEAVLMVNPVEPELKGEVDDKYQYSCENKDLRVHGWISVDPPVGFWQIIPSDEFQT 596
            PLAYPEAVL+VNPVEPE KGEVDDKYQYSC+NKD RVHGW+ ++PPVGFWQI PSDEF+T
Sbjct: 191  PLAYPEAVLLVNPVEPEFKGEVDDKYQYSCDNKDNRVHGWVCLEPPVGFWQITPSDEFRT 250

Query: 597  GGPVKQNLSSHVGPTSLAMFLSAHYAGEDLCPKFELGEPWKKVFGPVFIYLNSVMDENDP 776
            GGPVKQNL+SHVGPT+LAMF SAHYAGE L PKF   EPWKKVFGPVFIY+NSV  + DP
Sbjct: 251  GGPVKQNLTSHVGPTTLAMFHSAHYAGEPLVPKFGPDEPWKKVFGPVFIYVNSVFGDGDP 310

Query: 777  LTLWDDAKNQMLVEVQSWPYNFPESEDFPSSDQRGNVSGRLLVKDRYIDGDSIPANGAYV 956
              LW+DAK QM +EVQSWPY+FP SEDFPSSDQRGNVSGRLLV+D YI  D I A+ AYV
Sbjct: 311  FWLWEDAKEQMTIEVQSWPYSFPASEDFPSSDQRGNVSGRLLVQDGYISDDYILASCAYV 370

Query: 957  GLAPPGDVGSWQRECK 1004
            GLAPPGDVGSWQRECK
Sbjct: 371  GLAPPGDVGSWQRECK 386


>ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533272|gb|EEF35025.1| lyase,
            putative [Ricinus communis]
          Length = 642

 Score =  506 bits (1303), Expect = e-141
 Identities = 236/304 (77%), Positives = 271/304 (89%)
 Frame = +3

Query: 93   IKGNTFKVIVETEEQVEVSFSRAWDPSLQGKLVPLNIDKRFILLRGCSGFYSYAIYEHLG 272
            IKG +FKVIVETEEQVE+SF+R+WDPSL+GKL+PLNIDKRF++LRG SGFYSYAI+EHL 
Sbjct: 76   IKGTSFKVIVETEEQVELSFTRSWDPSLEGKLIPLNIDKRFVMLRGSSGFYSYAIFEHL- 134

Query: 273  STEWPAFSLGETRIAFKLRKDKFHYMAVANNRQRYMPLPDDRLPGRGQPLAYPEAVLMVN 452
              EWP F+L E RIAFKLRK+KFHYMAVA+NRQRYMPLPDDRL  RGQ LAYPEAVL+VN
Sbjct: 135  -KEWPGFNLAEARIAFKLRKEKFHYMAVADNRQRYMPLPDDRLSPRGQALAYPEAVLLVN 193

Query: 453  PVEPELKGEVDDKYQYSCENKDLRVHGWISVDPPVGFWQIIPSDEFQTGGPVKQNLSSHV 632
            PVE E KGE+DDKYQYSCENKD+RVHGWI +DP VGFWQI PS+EF++GGPVKQNL+SHV
Sbjct: 194  PVESEFKGELDDKYQYSCENKDIRVHGWICMDPSVGFWQITPSNEFRSGGPVKQNLTSHV 253

Query: 633  GPTSLAMFLSAHYAGEDLCPKFELGEPWKKVFGPVFIYLNSVMDENDPLTLWDDAKNQML 812
            GPT+L++FLSAHY+GEDL PKF  GE WKKVFGPVF+YLNSV+  +DPL+LW+DAK Q  
Sbjct: 254  GPTTLSVFLSAHYSGEDLVPKFVAGEAWKKVFGPVFMYLNSVLVGDDPLSLWEDAKEQTE 313

Query: 813  VEVQSWPYNFPESEDFPSSDQRGNVSGRLLVKDRYIDGDSIPANGAYVGLAPPGDVGSWQ 992
            +EVQSWPY FP SED+P S+QRG+VSGRLLVKDR++  D I ANGAYVGLAP GDVGSWQ
Sbjct: 314  IEVQSWPYFFPASEDYPKSEQRGSVSGRLLVKDRFVSDDYISANGAYVGLAPQGDVGSWQ 373

Query: 993  RECK 1004
            RECK
Sbjct: 374  RECK 377


>ref|XP_003603709.1| Rhamnogalacturonate lyase [Medicago truncatula]
            gi|355492757|gb|AES73960.1| Rhamnogalacturonate lyase
            [Medicago truncatula]
          Length = 651

 Score =  505 bits (1301), Expect = e-141
 Identities = 237/304 (77%), Positives = 270/304 (88%)
 Frame = +3

Query: 93   IKGNTFKVIVETEEQVEVSFSRAWDPSLQGKLVPLNIDKRFILLRGCSGFYSYAIYEHLG 272
            IK  TFKVI+E E+QVE+SF+R WD SL+GKLVPLNIDKRFI+LRGCSGFYSYAIYEHL 
Sbjct: 79   IKATTFKVILEDEDQVELSFTRTWDASLEGKLVPLNIDKRFIMLRGCSGFYSYAIYEHL- 137

Query: 273  STEWPAFSLGETRIAFKLRKDKFHYMAVANNRQRYMPLPDDRLPGRGQPLAYPEAVLMVN 452
              +WPAF+L ETRIAFKLRKDKFHYMA+A+NRQR MPLPDDR+  RGQ LAYPEAVL+VN
Sbjct: 138  -EDWPAFNLDETRIAFKLRKDKFHYMAMADNRQRNMPLPDDRVAPRGQALAYPEAVLLVN 196

Query: 453  PVEPELKGEVDDKYQYSCENKDLRVHGWISVDPPVGFWQIIPSDEFQTGGPVKQNLSSHV 632
            P+EPELKGEVDDKYQYSC+NKD +VHGWI +DP VGFW I PS+EF++GGPVKQNL+SHV
Sbjct: 197  PIEPELKGEVDDKYQYSCDNKDSQVHGWICMDPAVGFWLITPSNEFRSGGPVKQNLTSHV 256

Query: 633  GPTSLAMFLSAHYAGEDLCPKFELGEPWKKVFGPVFIYLNSVMDENDPLTLWDDAKNQML 812
            GPT+LA+FLSAHY+GEDL PKF+ GE WKKVFGPVFIY+NS  D +DP+ LWDDAK QML
Sbjct: 257  GPTTLAVFLSAHYSGEDLVPKFKAGEAWKKVFGPVFIYVNSPYDGSDPIKLWDDAKLQML 316

Query: 813  VEVQSWPYNFPESEDFPSSDQRGNVSGRLLVKDRYIDGDSIPANGAYVGLAPPGDVGSWQ 992
            +EVQSWPYNFPES+DFP  D+RGNV GRLLVK+RYID D + AN AYVGLA PG+VGSWQ
Sbjct: 317  MEVQSWPYNFPESDDFPKWDERGNVCGRLLVKERYIDDDYLSANCAYVGLATPGEVGSWQ 376

Query: 993  RECK 1004
            RECK
Sbjct: 377  RECK 380


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