BLASTX nr result
ID: Panax21_contig00028674
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00028674
(495 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631274.1| PREDICTED: pentatricopeptide repeat-containi... 224 4e-57
emb|CBI28554.3| unnamed protein product [Vitis vinifera] 224 4e-57
ref|XP_002328586.1| predicted protein [Populus trichocarpa] gi|2... 224 4e-57
ref|XP_002525359.1| pentatricopeptide repeat-containing protein,... 216 2e-54
gb|AAF79584.1|AC007945_4 F28C11.9 [Arabidopsis thaliana] 210 1e-52
>ref|XP_003631274.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic-like [Vitis vinifera]
Length = 667
Score = 224 bits (572), Expect = 4e-57
Identities = 110/159 (69%), Positives = 126/159 (79%)
Frame = -2
Query: 479 EEGVVPNALTFCYLIHGCGNERFVHELKQLHCYVIKNGWSEFNLFVANALVDFYSACGSV 300
EE V PN LTFCYLI GCGN RF E KQLHC+ IK GW E NLF ANALVDFY CG++
Sbjct: 205 EECVKPNGLTFCYLIRGCGNGRFCDEGKQLHCHAIKVGWVEANLFAANALVDFYCVCGNL 264
Query: 299 KDAQRSFEVISPEDVISWNSMVSVYANNGSTLDAIELFAKMQSWGKKPSIRSFVGLLNLS 120
DA++SFE I EDVISWNS+VSV+A +G DA+ELFA+MQSWGKKPSIRSFVG LN +
Sbjct: 265 IDAKKSFEAIRDEDVISWNSIVSVFAASGLLSDALELFARMQSWGKKPSIRSFVGFLNAA 324
Query: 119 RGKENILLGKQIHCFVVKMGFDIGSVHVQSALIDMYGKC 3
G +NI+ GKQI VVK+GF GSVHV+SALI+MYGKC
Sbjct: 325 IGCDNIIFGKQIQSHVVKLGFAPGSVHVESALINMYGKC 363
Score = 62.0 bits (149), Expect = 5e-08
Identities = 43/160 (26%), Positives = 75/160 (46%)
Frame = -2
Query: 482 VEEGVVPNALTFCYLIHGCGNERFVHELKQLHCYVIKNGWSEFNLFVANALVDFYSACGS 303
V +G+ ++ TF ++ C N E Q+H VI G+S NL+VA +LVD Y G
Sbjct: 103 VFQGIRESSSTFSSVLSVCSNAGLHQEAIQVHSRVIFLGFSS-NLYVAGSLVDLYMQMGD 161
Query: 302 VKDAQRSFEVISPEDVISWNSMVSVYANNGSTLDAIELFAKMQSWGKKPSIRSFVGLLNL 123
A R F + ++ N ++ + + +++ M+ KP+ +F L+
Sbjct: 162 CDTALRLFSNLPRRNLAICNLVLRGFCELSRSEWLFTMYSAMKEECVKPNGLTFCYLIRG 221
Query: 122 SRGKENILLGKQIHCFVVKMGFDIGSVHVQSALIDMYGKC 3
GKQ+HC +K+G+ ++ +AL+D Y C
Sbjct: 222 CGNGRFCDEGKQLHCHAIKVGWVEANLFAANALVDFYCVC 261
Score = 58.2 bits (139), Expect = 7e-07
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 11/153 (7%)
Frame = -2
Query: 431 GCGNERFVHELKQLHCYVIKNGWSEFNLFVANALVDFYSACGSVKDAQRSFEVISPEDVI 252
GC N F KQ+ +V+K G++ ++ V +AL++ Y CG +K + FE + +
Sbjct: 326 GCDNIIFG---KQIQSHVVKLGFAPGSVHVESALINMYGKCGDIKSSVSVFESVPERTLE 382
Query: 251 SWNSMVSVYANNGSTLDAIELFAKMQSWG-----------KKPSIRSFVGLLNLSRGKEN 105
NS++S + G D +ELF M G K S+ S G L R
Sbjct: 383 ICNSLMSSLLHCGIVEDVLELFGLMVDEGIGVDEVTLSTSLKASLVSAFGSLACCR---- 438
Query: 104 ILLGKQIHCFVVKMGFDIGSVHVQSALIDMYGK 6
+HC +K GF+ + V +LID Y K
Sbjct: 439 -----LLHCCAIKSGFEFDTA-VSCSLIDAYSK 465
>emb|CBI28554.3| unnamed protein product [Vitis vinifera]
Length = 1125
Score = 224 bits (572), Expect = 4e-57
Identities = 110/159 (69%), Positives = 126/159 (79%)
Frame = -2
Query: 479 EEGVVPNALTFCYLIHGCGNERFVHELKQLHCYVIKNGWSEFNLFVANALVDFYSACGSV 300
EE V PN LTFCYLI GCGN RF E KQLHC+ IK GW E NLF ANALVDFY CG++
Sbjct: 205 EECVKPNGLTFCYLIRGCGNGRFCDEGKQLHCHAIKVGWVEANLFAANALVDFYCVCGNL 264
Query: 299 KDAQRSFEVISPEDVISWNSMVSVYANNGSTLDAIELFAKMQSWGKKPSIRSFVGLLNLS 120
DA++SFE I EDVISWNS+VSV+A +G DA+ELFA+MQSWGKKPSIRSFVG LN +
Sbjct: 265 IDAKKSFEAIRDEDVISWNSIVSVFAASGLLSDALELFARMQSWGKKPSIRSFVGFLNAA 324
Query: 119 RGKENILLGKQIHCFVVKMGFDIGSVHVQSALIDMYGKC 3
G +NI+ GKQI VVK+GF GSVHV+SALI+MYGKC
Sbjct: 325 IGCDNIIFGKQIQSHVVKLGFAPGSVHVESALINMYGKC 363
Score = 62.0 bits (149), Expect = 5e-08
Identities = 43/160 (26%), Positives = 75/160 (46%)
Frame = -2
Query: 482 VEEGVVPNALTFCYLIHGCGNERFVHELKQLHCYVIKNGWSEFNLFVANALVDFYSACGS 303
V +G+ ++ TF ++ C N E Q+H VI G+S NL+VA +LVD Y G
Sbjct: 103 VFQGIRESSSTFSSVLSVCSNAGLHQEAIQVHSRVIFLGFSS-NLYVAGSLVDLYMQMGD 161
Query: 302 VKDAQRSFEVISPEDVISWNSMVSVYANNGSTLDAIELFAKMQSWGKKPSIRSFVGLLNL 123
A R F + ++ N ++ + + +++ M+ KP+ +F L+
Sbjct: 162 CDTALRLFSNLPRRNLAICNLVLRGFCELSRSEWLFTMYSAMKEECVKPNGLTFCYLIRG 221
Query: 122 SRGKENILLGKQIHCFVVKMGFDIGSVHVQSALIDMYGKC 3
GKQ+HC +K+G+ ++ +AL+D Y C
Sbjct: 222 CGNGRFCDEGKQLHCHAIKVGWVEANLFAANALVDFYCVC 261
Score = 58.2 bits (139), Expect = 7e-07
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 11/153 (7%)
Frame = -2
Query: 431 GCGNERFVHELKQLHCYVIKNGWSEFNLFVANALVDFYSACGSVKDAQRSFEVISPEDVI 252
GC N F KQ+ +V+K G++ ++ V +AL++ Y CG +K + FE + +
Sbjct: 326 GCDNIIFG---KQIQSHVVKLGFAPGSVHVESALINMYGKCGDIKSSVSVFESVPERTLE 382
Query: 251 SWNSMVSVYANNGSTLDAIELFAKMQSWG-----------KKPSIRSFVGLLNLSRGKEN 105
NS++S + G D +ELF M G K S+ S G L R
Sbjct: 383 ICNSLMSSLLHCGIVEDVLELFGLMVDEGIGVDEVTLSTSLKASLVSAFGSLACCR---- 438
Query: 104 ILLGKQIHCFVVKMGFDIGSVHVQSALIDMYGK 6
+HC +K GF+ + V +LID Y K
Sbjct: 439 -----LLHCCAIKSGFEFDTA-VSCSLIDAYSK 465
>ref|XP_002328586.1| predicted protein [Populus trichocarpa] gi|222838568|gb|EEE76933.1|
predicted protein [Populus trichocarpa]
Length = 699
Score = 224 bits (572), Expect = 4e-57
Identities = 111/158 (70%), Positives = 128/158 (81%)
Frame = -2
Query: 476 EGVVPNALTFCYLIHGCGNERFVHELKQLHCYVIKNGWSEFNLFVANALVDFYSACGSVK 297
+GV PN L+FCYLI GC NE+F +E KQLHC++IK GW+ N+FVANALVDFYSAC S+
Sbjct: 221 DGVHPNGLSFCYLIRGCCNEKFFYEGKQLHCHIIKVGWARSNIFVANALVDFYSACKSLN 280
Query: 296 DAQRSFEVISPEDVISWNSMVSVYANNGSTLDAIELFAKMQSWGKKPSIRSFVGLLNLSR 117
DA++SFE I EDVISWNS+VSVYA+ G +A+ELF MQ WG KPSIRSFV LL+LS
Sbjct: 281 DARKSFESIKVEDVISWNSIVSVYADCGLLFEAVELFYLMQFWG-KPSIRSFVALLHLSS 339
Query: 116 GKENILLGKQIHCFVVKMGFDIGSVHVQSALIDMYGKC 3
NIL GKQIHC V+KMGFDIGS HVQSALIDMYGKC
Sbjct: 340 LNGNILFGKQIHCCVLKMGFDIGSFHVQSALIDMYGKC 377
Score = 73.6 bits (179), Expect = 2e-11
Identities = 43/161 (26%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
Frame = -2
Query: 482 VEEGVVPNALTFCYLIHGCGNER-FVHELKQLHCYVIKNGWSEFNLFVANALVDFYSACG 306
V G+ + TF ++ C ++ F+ + Q+HC +IK G NLF+ +LV FY G
Sbjct: 117 VSLGIKESPSTFSSVLSICSSQDGFLRQGIQVHCRIIKLGCGS-NLFIRTSLVGFYMQMG 175
Query: 305 SVKDAQRSFEVISPEDVISWNSMVSVYANNGSTLDAIELFAKMQSWGKKPSIRSFVGLLN 126
F+ + ++ +WN ++ + G + + ++ +M+ G P+ SF L+
Sbjct: 176 CFDLGFSLFDEMPERNLATWNLVLRGFCELGRFHELLSVYHEMKLDGVHPNGLSFCYLIR 235
Query: 125 LSRGKENILLGKQIHCFVVKMGFDIGSVHVQSALIDMYGKC 3
++ GKQ+HC ++K+G+ ++ V +AL+D Y C
Sbjct: 236 GCCNEKFFYEGKQLHCHIIKVGWARSNIFVANALVDFYSAC 276
Score = 60.5 bits (145), Expect = 1e-07
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Frame = -2
Query: 464 PNALTFCYLIHGCGNERFVHELKQLHCYVIKNGWSEFNLFVANALVDFYSACGSVKDAQR 285
P+ +F L+H + KQ+HC V+K G+ + V +AL+D Y C ++ +
Sbjct: 326 PSIRSFVALLHLSSLNGNILFGKQIHCCVLKMGFDIGSFHVQSALIDMYGKCRYIESSVS 385
Query: 284 SFEVISPEDVISWNSMVSVYANNGSTLDAIELFAKMQSWGKKPSIRSFVGLLNLSRGKEN 105
+FE + + NS+++ + G D +E++ M G +F L E
Sbjct: 386 AFESVPKKTTQICNSLMTSLLHCGIVYDVVEMYGLMVDEGIGLDEVTFSTTLKALSVSEF 445
Query: 104 ILLG--KQIHCFVVKMGFDIGSVHVQSALIDMYGKC 3
+ + +HC +K+GF + V +LID Y +C
Sbjct: 446 ASMDSCRLVHCCAMKLGFG-SDIAVSCSLIDAYSRC 480
Score = 56.2 bits (134), Expect = 3e-06
Identities = 33/114 (28%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Frame = -2
Query: 350 LFVANALVDFYSACGSVKDAQRSFEVISPEDVISWNSMVSVYANNGSTLDAIELFAKMQS 171
++ N +D Y G+V AQ+ F+ +S DV+++N MVS G A+ + +M S
Sbjct: 59 IYAKNRTLDSYIKSGNVTLAQKLFDEMSMCDVVTYNLMVSGLGKYGIPKQALYYYYEMVS 118
Query: 170 WGKKPSIRSFVGLLNLSRGKENIL-LGKQIHCFVVKMGFDIGSVHVQSALIDMY 12
G K S +F +L++ ++ L G Q+HC ++K+G ++ ++++L+ Y
Sbjct: 119 LGIKESPSTFSSVLSICSSQDGFLRQGIQVHCRIIKLGCG-SNLFIRTSLVGFY 171
>ref|XP_002525359.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535322|gb|EEF36997.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 483
Score = 216 bits (549), Expect = 2e-54
Identities = 106/153 (69%), Positives = 122/153 (79%)
Frame = -2
Query: 461 NALTFCYLIHGCGNERFVHELKQLHCYVIKNGWSEFNLFVANALVDFYSACGSVKDAQRS 282
N L+FCYLI GC N+ F +E +QLHC+VIK GW N+FVANALVDFYSACGS+ DA+ S
Sbjct: 53 NGLSFCYLIRGCCNKTFFNEGRQLHCHVIKVGWVNSNIFVANALVDFYSACGSLNDAKIS 112
Query: 281 FEVISPEDVISWNSMVSVYANNGSTLDAIELFAKMQSWGKKPSIRSFVGLLNLSRGKENI 102
F+ I EDVISWNS++SV A+NG DA+ELF MQ WGKKPSIRSFVG LNLS +I
Sbjct: 113 FQAIPLEDVISWNSILSVCADNGLHFDALELFYMMQFWGKKPSIRSFVGFLNLSSMNGDI 172
Query: 101 LLGKQIHCFVVKMGFDIGSVHVQSALIDMYGKC 3
+ GKQIHC VVK+GF GSVHVQSALIDMYGKC
Sbjct: 173 VFGKQIHCCVVKLGFYNGSVHVQSALIDMYGKC 205
Score = 60.1 bits (144), Expect = 2e-07
Identities = 37/135 (27%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
Frame = -2
Query: 398 KQLHCYVIKNGWSEFNLFVANALVDFYSACGSVKDAQRSFEVISPEDVISWNSMVSVYAN 219
KQ+HC V+K G+ ++ V +AL+D Y C ++++ +E + + NS+++ +
Sbjct: 176 KQIHCCVVKLGFYNGSVHVQSALIDMYGKCFDIENSISVYESLPKRTLECCNSLMTSLLH 235
Query: 218 NGSTLDAIELFAKMQSWGKKPSIRSFVGLLNLSRGKENILLG----KQIHCFVVKMGFDI 51
+G D I++F M G + F L E++L+ + +HC V+K GF+
Sbjct: 236 SGFVDDVIDMFGLMVDEG--IGLDEFTFCTVLKALLESVLVSLASCRLVHCCVIKFGFE- 292
Query: 50 GSVHVQSALIDMYGK 6
+ V +LID Y +
Sbjct: 293 SDISVSCSLIDGYSR 307
Score = 58.2 bits (139), Expect = 7e-07
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Frame = -2
Query: 482 VEEGVVPNALTFCYLIHGCGNERFVH--ELKQLHCYVIKNGWSEFNLFVANALVDFYSAC 309
V+EG+ + TFC ++ V + +HC VIK G+ E ++ V+ +L+D YS
Sbjct: 250 VDEGIGLDEFTFCTVLKALLESVLVSLASCRLVHCCVIKFGF-ESDISVSCSLIDGYSRS 308
Query: 308 GSVKDAQRSFEVISPEDVISWNSMVSVYANNGSTLDAIELFAKMQSWGKKPSIRSFVGLL 129
G V+ +Q+ F +S +V S+++ +A NG + +E+F M G KP +F+ +L
Sbjct: 309 GKVELSQKVFSQLSSPNVFCLTSIINGFARNGMGRECLEIFETMIQKGLKPDKVTFLCVL 368
>gb|AAF79584.1|AC007945_4 F28C11.9 [Arabidopsis thaliana]
Length = 1161
Score = 210 bits (534), Expect = 1e-52
Identities = 95/158 (60%), Positives = 122/158 (77%)
Frame = -2
Query: 476 EGVVPNALTFCYLIHGCGNERFVHELKQLHCYVIKNGWSEFNLFVANALVDFYSACGSVK 297
EGV N LT+CY+I GC ++R V+E KQLH V+K+GW+ N+FVAN LVD+YSACG +
Sbjct: 207 EGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLS 266
Query: 296 DAQRSFEVISPEDVISWNSMVSVYANNGSTLDAIELFAKMQSWGKKPSIRSFVGLLNLSR 117
+ RSF + +DVISWNS+VSV A+ GS LD+++LF+KMQ WGK+PSIR F+ LN
Sbjct: 267 GSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCS 326
Query: 116 GKENILLGKQIHCFVVKMGFDIGSVHVQSALIDMYGKC 3
+I GKQIHC+V+KMGFD+ S+HVQSALIDMYGKC
Sbjct: 327 RNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKC 364
Score = 71.6 bits (174), Expect = 6e-11
Identities = 43/157 (27%), Positives = 79/157 (50%)
Frame = -2
Query: 473 GVVPNALTFCYLIHGCGNERFVHELKQLHCYVIKNGWSEFNLFVANALVDFYSACGSVKD 294
G+ +A TF ++ C +E F E Q+HC VI G+ N+FV +ALV Y+ V
Sbjct: 107 GLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFG-CNMFVRSALVGLYACLRLVDV 165
Query: 293 AQRSFEVISPEDVISWNSMVSVYANNGSTLDAIELFAKMQSWGKKPSIRSFVGLLNLSRG 114
A + F+ + ++ N ++ + G + E++ +M+ G + ++ ++
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 113 KENILLGKQIHCFVVKMGFDIGSVHVQSALIDMYGKC 3
+ GKQ+H VVK G++I ++ V + L+D Y C
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSAC 262
Score = 67.8 bits (164), Expect = 9e-10
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Frame = -2
Query: 488 WGVEEGVVPNALTFCYLIHGCGNERFVHELKQLHCYVIKNGWSEFNLFVANALVDFYSAC 309
WG + P F ++ C + KQ+HCYV+K G+ +L V +AL+D Y C
Sbjct: 309 WGKRPSIRP----FMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKC 364
Query: 308 GSVKDAQRSFEVISPEDVISWNSMVSVYANNGSTLDAIELFAKMQSWG---KKPSIRSFV 138
++++ ++ + ++ NS+++ + G T D IE+F M G + ++ + +
Sbjct: 365 NGIENSVLLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVL 424
Query: 137 GLLNLSRGKENILLGKQIHCFVVKMGFDIGSVHVQSALIDMYGK 6
L+LS E++ +HC +K G+ V V +LID Y K
Sbjct: 425 KALSLSL-PESLHSCTLVHCCAIKSGY-AADVAVSCSLIDAYTK 466
Score = 63.5 bits (153), Expect = 2e-08
Identities = 35/113 (30%), Positives = 66/113 (58%)
Frame = -2
Query: 350 LFVANALVDFYSACGSVKDAQRSFEVISPEDVISWNSMVSVYANNGSTLDAIELFAKMQS 171
++ N +D G++ A +F+ +S DV+++N ++S + G +L AIEL+A+M S
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 170 WGKKPSIRSFVGLLNLSRGKENILLGKQIHCFVVKMGFDIGSVHVQSALIDMY 12
G + S +F +L++ + G Q+HC V+ +GF ++ V+SAL+ +Y
Sbjct: 106 CGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGC-NMFVRSALVGLY 157