BLASTX nr result

ID: Panax21_contig00028629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028629
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]    99   3e-19
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               99   5e-19
gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]                 98   7e-19
emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]    97   1e-18
emb|CAN83798.1| hypothetical protein VITISV_039072 [Vitis vinifera]    97   2e-18

>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/82 (54%), Positives = 62/82 (75%)
 Frame = +1

Query: 1   DNIGATYLAANPVFHARTKHIELDFYFVREKVARKDLLVRYISTHDQVADIFTKALPTSK 180
           DN+  TYLAANP+ H+R KH+E+D++FVRE+V +K L VR++ + DQVADI TK+L T  
Sbjct: 248 DNLSTTYLAANPILHSRAKHVEIDYHFVRERVLQKTLDVRFLPSEDQVADILTKSLSTQH 307

Query: 181 YQYLRSKLTVLPTTISLMGGIK 246
           + +LRSKLTVL   + L G +K
Sbjct: 308 FLHLRSKLTVLSRPVCLRGDVK 329


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/79 (58%), Positives = 61/79 (77%)
 Frame = +1

Query: 1    DNIGATYLAANPVFHARTKHIELDFYFVREKVARKDLLVRYISTHDQVADIFTKALPTSK 180
            DNI +  LA+NPVFH+RTKHIE+D+++VR+KV R++L V Y+ST DQ ADIFTK L T +
Sbjct: 1296 DNISSISLASNPVFHSRTKHIEVDYHYVRDKVVRQELAVSYVSTADQTADIFTKGLSTQR 1355

Query: 181  YQYLRSKLTVLPTTISLMG 237
            +Q+L SKL V    +SL G
Sbjct: 1356 FQFLASKLPVRARPLSLRG 1374


>gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]
          Length = 1012

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 47/70 (67%), Positives = 58/70 (82%)
 Frame = +1

Query: 1    DNIGATYLAANPVFHARTKHIELDFYFVREKVARKDLLVRYISTHDQVADIFTKALPTSK 180
            DN+GATYL+ANP+FHARTKHIE+DF+FVRE+VA+K L VR+IST DQ+AD FTKALP  K
Sbjct: 940  DNLGATYLSANPIFHARTKHIEIDFHFVRERVAQKLLEVRFISTGDQLADGFTKALPVIK 999

Query: 181  YQYLRSKLTV 210
             +  R  L +
Sbjct: 1000 LKKFRDNLNL 1009


>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
          Length = 1074

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/79 (54%), Positives = 64/79 (81%)
 Frame = +1

Query: 1    DNIGATYLAANPVFHARTKHIELDFYFVREKVARKDLLVRYISTHDQVADIFTKALPTSK 180
            DNI AT LAAN VFHAR+KHIE+DF+FVR+KV  K+LL++Y+ + DQ+A++FTK +P+ +
Sbjct: 981  DNISATALAANSVFHARSKHIEIDFHFVRDKVLHKELLIQYVPSTDQLANVFTKHVPSCQ 1040

Query: 181  YQYLRSKLTVLPTTISLMG 237
            +   R++L+V+P  +SL G
Sbjct: 1041 FSAARTRLSVVPRPVSLRG 1059


>emb|CAN83798.1| hypothetical protein VITISV_039072 [Vitis vinifera]
          Length = 787

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/79 (58%), Positives = 59/79 (74%)
 Frame = +1

Query: 13  ATYLAANPVFHARTKHIELDFYFVREKVARKDLLVRYISTHDQVADIFTKALPTSKYQYL 192
           AT LAANP+ HA TKHIE+DF F+RE+V  K L V +  + +Q+ADIFTK LPT ++Q L
Sbjct: 703 ATQLAANPILHAXTKHIEIDFXFIRERVVNKSLQVHFTPSKEQLADIFTKPLPTQRFQSL 762

Query: 193 RSKLTVLPTTISLMGGIKS 249
           R+KLT LP+ ISL G  K+
Sbjct: 763 RTKLTALPSPISLWGDDKA 781


Top