BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028620
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                     286   1e-75
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   282   3e-74
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   281   7e-74
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   278   5e-73
emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group] gi...   276   2e-72

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  286 bits (733), Expect = 1e-75
 Identities = 138/175 (78%), Positives = 155/175 (88%)
 Frame = -1

Query: 584  RTKDSFLVYGGEDELAVKGYTDASFQTDNDDYKS*SGFVFCLNGGAVSWKSSKQETVADS 405
            RTKD FLVYGGE++L V GYTDASFQTD DDY+S SGFVFCLNGGAVSWKSSKQ+TVADS
Sbjct: 1143 RTKDMFLVYGGEEDLVVSGYTDASFQTDKDDYRSQSGFVFCLNGGAVSWKSSKQDTVADS 1202

Query: 404  TTEAEYIAASSAAKEAVWIKKFITELGVVPTIVDPVALYCDNNGAIAQAKEPRSHQRSKH 225
            TTEAEYIAAS AAKEAVWIKKF++ELGV+ +   P++LYCDN+GAIAQAKEPRSHQ+SKH
Sbjct: 1203 TTEAEYIAASEAAKEAVWIKKFVSELGVMTSTTGPMSLYCDNSGAIAQAKEPRSHQKSKH 1262

Query: 224  ILRRYHLIREIIDRGDVHIGRVPTDDNVADPLTKALSQQKHEGHTSSMGIRYMSD 60
            ILRRYHLIREI+DRGDV I +V TD N+ADPLTK L Q KHE HT +MGIRY+ D
Sbjct: 1263 ILRRYHLIREIVDRGDVKICKVHTDLNIADPLTKPLPQPKHEAHTRAMGIRYLHD 1317


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  282 bits (721), Expect = 3e-74
 Identities = 135/175 (77%), Positives = 154/175 (88%)
 Frame = -1

Query: 584  RTKDSFLVYGGEDELAVKGYTDASFQTDNDDYKS*SGFVFCLNGGAVSWKSSKQETVADS 405
            RTKD+FL+YGG++EL V GYTDASFQTD DDY+S SGFVF LNGGAVSWKSSKQETVADS
Sbjct: 1139 RTKDAFLIYGGDEELVVNGYTDASFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADS 1198

Query: 404  TTEAEYIAASSAAKEAVWIKKFITELGVVPTIVDPVALYCDNNGAIAQAKEPRSHQRSKH 225
            TT+AEYIAAS AAKE VWI+ FI ELGVVP+   P+ LYCDNNGAIAQAKEPRSHQ+SKH
Sbjct: 1199 TTKAEYIAASEAAKEGVWIRNFIAELGVVPSASSPMDLYCDNNGAIAQAKEPRSHQKSKH 1258

Query: 224  ILRRYHLIREIIDRGDVHIGRVPTDDNVADPLTKALSQQKHEGHTSSMGIRYMSD 60
            ILRRYHLIRE++DRGDV I ++ TD NVADPLTK L+Q KHE HT ++GIRY++D
Sbjct: 1259 ILRRYHLIRELVDRGDVKICKIHTDLNVADPLTKPLTQPKHEAHTRAIGIRYLND 1313


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  281 bits (718), Expect = 7e-74
 Identities = 136/173 (78%), Positives = 152/173 (87%)
 Frame = -1

Query: 584  RTKDSFLVYGGEDELAVKGYTDASFQTDNDDYKS*SGFVFCLNGGAVSWKSSKQETVADS 405
            RTKD FLVYGG++EL V GYTDASFQTD DDY+S SGFVF LNGGAVSWKSSKQETVADS
Sbjct: 723  RTKDVFLVYGGDEELVVNGYTDASFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADS 782

Query: 404  TTEAEYIAASSAAKEAVWIKKFITELGVVPTIVDPVALYCDNNGAIAQAKEPRSHQRSKH 225
            TTEAEYIAAS AAKE VWI+ FITELG+VP+   P+ LYCDNNGAIAQAKEPRSHQ+SKH
Sbjct: 783  TTEAEYIAASEAAKEGVWIRNFITELGMVPSASSPMDLYCDNNGAIAQAKEPRSHQKSKH 842

Query: 224  ILRRYHLIREIIDRGDVHIGRVPTDDNVADPLTKALSQQKHEGHTSSMGIRYM 66
            ILRRYHLIRE++DRGDV I +V TD N+ADPLTK L+Q KHE HT ++GIRY+
Sbjct: 843  ILRRYHLIRELVDRGDVKICKVHTDLNIADPLTKPLTQPKHEAHTRAIGIRYL 895


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  278 bits (711), Expect = 5e-73
 Identities = 135/173 (78%), Positives = 149/173 (86%)
 Frame = -1

Query: 584  RTKDSFLVYGGEDELAVKGYTDASFQTDNDDYKS*SGFVFCLNGGAVSWKSSKQETVADS 405
            RTKD FLVYGG +EL V GYTDASFQTD DD++S SGF FCLNGGAVSWKS+KQ TVADS
Sbjct: 790  RTKDKFLVYGGSEELVVSGYTDASFQTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADS 849

Query: 404  TTEAEYIAASSAAKEAVWIKKFITELGVVPTIVDPVALYCDNNGAIAQAKEPRSHQRSKH 225
            TTEAEYIAAS AAKE VWI+KFITELGVVP+I  P+ LYCDNNGAIAQAKEP+SHQ+SKH
Sbjct: 850  TTEAEYIAASEAAKEVVWIRKFITELGVVPSISGPIDLYCDNNGAIAQAKEPKSHQKSKH 909

Query: 224  ILRRYHLIREIIDRGDVHIGRVPTDDNVADPLTKALSQQKHEGHTSSMGIRYM 66
            I RRYHLIREIIDRGDV I RV TD NVAD  TK L Q KHE HT+++GIR++
Sbjct: 910  IQRRYHLIREIIDRGDVKISRVSTDANVADHFTKPLPQPKHESHTTAIGIRFI 962


>emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group]
            gi|38347202|emb|CAD40526.2| OSJNBa0023J03.14 [Oryza
            sativa Japonica Group] gi|116308930|emb|CAH66059.1|
            OSIGBa0125J07.8 [Oryza sativa Indica Group]
            gi|116309043|emb|CAH66155.1| OSIGBa0113B06.1 [Oryza
            sativa Indica Group]
          Length = 704

 Score =  276 bits (706), Expect = 2e-72
 Identities = 134/175 (76%), Positives = 151/175 (86%)
 Frame = -1

Query: 584  RTKDSFLVYGGEDELAVKGYTDASFQTDNDDYKS*SGFVFCLNGGAVSWKSSKQETVADS 405
            RTKD FLVYGG++EL V GYTDASFQTD DD++S SGFVFCLNGGAVSWKSSKQ TVADS
Sbjct: 530  RTKDMFLVYGGQEELVVNGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQNTVADS 589

Query: 404  TTEAEYIAASSAAKEAVWIKKFITELGVVPTIVDPVALYCDNNGAIAQAKEPRSHQRSKH 225
            TTEAEYIAAS AAKE VWIKKF+++LGV+ +   P+ LYCDN+GAIAQAKEPRSHQ+SKH
Sbjct: 590  TTEAEYIAASEAAKEVVWIKKFVSQLGVMTSTSRPMDLYCDNSGAIAQAKEPRSHQKSKH 649

Query: 224  ILRRYHLIREIIDRGDVHIGRVPTDDNVADPLTKALSQQKHEGHTSSMGIRYMSD 60
            ILRRYHLIREI+ RGDV I ++ TD NVADPLTK L Q KHE HT +MGIRY+ D
Sbjct: 650  ILRRYHLIREIVGRGDVKICKIHTDLNVADPLTKPLPQPKHEAHTRAMGIRYVHD 704