BLASTX nr result

ID: Panax21_contig00028613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028613
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis v...   260   7e-68
emb|CBI24130.3| unnamed protein product [Vitis vinifera]              260   7e-68
ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|2...   258   3e-67
ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communi...   251   4e-65
ref|XP_003546839.1| PREDICTED: nuclear-pore anchor-like [Glycine...   247   8e-64

>ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis vinifera]
          Length = 2087

 Score =  260 bits (665), Expect = 7e-68
 Identities = 131/166 (78%), Positives = 148/166 (89%)
 Frame = +1

Query: 1   VNSVENSDMVEDTHMLVPSIPLGVSGTALAASLLRDGWSLAKMYAKYQETVDALRHEELG 180
           ++S + +DMVED  MLVP IP GVSGTALAASLLRDGWSLAKMY+KYQE VDALRHE+LG
Sbjct: 376 LDSFQTNDMVEDNCMLVPKIPAGVSGTALAASLLRDGWSLAKMYSKYQEAVDALRHEQLG 435

Query: 181 RKQSEAILERVLYEIEEKAGVILDERAEHERLVDAYSAVNQKLQHSLSEQTNLQKSIQEL 360
           RK SEA+LE+VL+EIEEKA VILDERAEHER+V+ YSA+NQKLQ SLSEQ+NL K+IQEL
Sbjct: 436 RKHSEAMLEQVLHEIEEKAVVILDERAEHERMVEGYSAINQKLQQSLSEQSNLDKTIQEL 495

Query: 361 KADLRRHERDYDVAQKEIVDLQKQVTVLLKECRDIQLRCGSASHDY 498
           KADLR+  RDY VAQKEIVDL+KQVTVLLKECRDIQLRCG   HD+
Sbjct: 496 KADLRQQGRDYAVAQKEIVDLEKQVTVLLKECRDIQLRCGLVGHDF 541


>emb|CBI24130.3| unnamed protein product [Vitis vinifera]
          Length = 2088

 Score =  260 bits (665), Expect = 7e-68
 Identities = 131/166 (78%), Positives = 148/166 (89%)
 Frame = +1

Query: 1   VNSVENSDMVEDTHMLVPSIPLGVSGTALAASLLRDGWSLAKMYAKYQETVDALRHEELG 180
           ++S + +DMVED  MLVP IP GVSGTALAASLLRDGWSLAKMY+KYQE VDALRHE+LG
Sbjct: 376 LDSFQTNDMVEDNCMLVPKIPAGVSGTALAASLLRDGWSLAKMYSKYQEAVDALRHEQLG 435

Query: 181 RKQSEAILERVLYEIEEKAGVILDERAEHERLVDAYSAVNQKLQHSLSEQTNLQKSIQEL 360
           RK SEA+LE+VL+EIEEKA VILDERAEHER+V+ YSA+NQKLQ SLSEQ+NL K+IQEL
Sbjct: 436 RKHSEAMLEQVLHEIEEKAVVILDERAEHERMVEGYSAINQKLQQSLSEQSNLDKTIQEL 495

Query: 361 KADLRRHERDYDVAQKEIVDLQKQVTVLLKECRDIQLRCGSASHDY 498
           KADLR+  RDY VAQKEIVDL+KQVTVLLKECRDIQLRCG   HD+
Sbjct: 496 KADLRQQGRDYAVAQKEIVDLEKQVTVLLKECRDIQLRCGLVGHDF 541


>ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|222852039|gb|EEE89586.1|
           predicted protein [Populus trichocarpa]
          Length = 2052

 Score =  258 bits (660), Expect = 3e-67
 Identities = 126/165 (76%), Positives = 146/165 (88%)
 Frame = +1

Query: 1   VNSVENSDMVEDTHMLVPSIPLGVSGTALAASLLRDGWSLAKMYAKYQETVDALRHEELG 180
           ++ + N D+ +   M+V  IP+GVSGTALAASLLRDGWSLAKMYAKYQE VDALRHE+LG
Sbjct: 375 MDPLNNDDLADGNSMVVSKIPVGVSGTALAASLLRDGWSLAKMYAKYQEAVDALRHEQLG 434

Query: 181 RKQSEAILERVLYEIEEKAGVILDERAEHERLVDAYSAVNQKLQHSLSEQTNLQKSIQEL 360
           RK+SEA+L+RVL E+EEKAGVILDER E+ER+V++YS +NQKLQHS SEQ NL+K+IQEL
Sbjct: 435 RKESEAVLQRVLCELEEKAGVILDERVEYERMVESYSVINQKLQHSFSEQANLEKTIQEL 494

Query: 361 KADLRRHERDYDVAQKEIVDLQKQVTVLLKECRDIQLRCGSASHD 495
           KADLRRHER Y  AQKEIVDLQKQVTVLLKECRDIQLRCGS+ HD
Sbjct: 495 KADLRRHERGYSFAQKEIVDLQKQVTVLLKECRDIQLRCGSSGHD 539


>ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communis]
           gi|223541994|gb|EEF43539.1| Nucleoprotein TPR, putative
           [Ricinus communis]
          Length = 2095

 Score =  251 bits (641), Expect = 4e-65
 Identities = 124/175 (70%), Positives = 152/175 (86%), Gaps = 11/175 (6%)
 Frame = +1

Query: 4   NSVENSDMVEDTHMLVPSIPLGVSGTALAASLLRDGWSLAKMYAKYQETVDALRHEELGR 183
           +S+++S++++D ++LVP IP+GVSGTALAASLLRDGWSLAKMY KYQE VDALRHE+LGR
Sbjct: 376 DSLDSSEIIDDNNLLVPRIPVGVSGTALAASLLRDGWSLAKMYTKYQEAVDALRHEQLGR 435

Query: 184 KQSEAILERVLYEIEEKAGVILDERAEHERLVDAYSAVNQKLQHSLSEQTNLQKSIQELK 363
           K+SEAIL+RVLYE+EEKAG+I+DERAE+ R+ +++S +NQKLQHS+SEQ NLQK+IQELK
Sbjct: 436 KESEAILQRVLYELEEKAGIIMDERAEYSRMAESHSVINQKLQHSISEQENLQKAIQELK 495

Query: 364 ADLRRHERDYDVAQKEIVDLQKQ-----------VTVLLKECRDIQLRCGSASHD 495
           ADLRR ER+  +AQKEIVDLQKQ           VTVLLKECRDIQLRCGS +HD
Sbjct: 496 ADLRRSERENSMAQKEIVDLQKQAWILGASFFHFVTVLLKECRDIQLRCGSTAHD 550


>ref|XP_003546839.1| PREDICTED: nuclear-pore anchor-like [Glycine max]
          Length = 2075

 Score =  247 bits (630), Expect = 8e-64
 Identities = 121/169 (71%), Positives = 145/169 (85%)
 Frame = +1

Query: 1   VNSVENSDMVEDTHMLVPSIPLGVSGTALAASLLRDGWSLAKMYAKYQETVDALRHEELG 180
           + S+E   MVE+  +LVP IP+GVSGTALAASLLRDGWSLAKMYAKYQE VDALRHE+LG
Sbjct: 375 MESIEADSMVEENSLLVPRIPVGVSGTALAASLLRDGWSLAKMYAKYQEVVDALRHEQLG 434

Query: 181 RKQSEAILERVLYEIEEKAGVILDERAEHERLVDAYSAVNQKLQHSLSEQTNLQKSIQEL 360
           RK+SEA+L+RVLYE+E+KA  ILDER EH+++ DAYS +NQKLQ+SL+E +NL+K+IQEL
Sbjct: 435 RKESEAVLQRVLYELEQKAEAILDERVEHDKMADAYSLMNQKLQNSLNENSNLEKTIQEL 494

Query: 361 KADLRRHERDYDVAQKEIVDLQKQVTVLLKECRDIQLRCGSASHDYDGD 507
           KADL+R ERDY++  KE  DLQKQVTVLLKECRDIQLRCGS  +D   D
Sbjct: 495 KADLKRRERDYNLVLKETDDLQKQVTVLLKECRDIQLRCGSMGYDIVDD 543


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