BLASTX nr result

ID: Panax21_contig00028596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028596
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB52073.1| putative lycopene epsilon cyclase [Daucus carota ...   381   e-104
emb|CBI27881.3| unnamed protein product [Vitis vinifera]              358   6e-97
ref|XP_002281164.1| PREDICTED: lycopene epsilon cyclase, chlorop...   358   6e-97
gb|ADK74376.1| lycopene epsilon cyclase [Camellia sinensis var. ...   357   2e-96
gb|AFP28798.1| lycopene epsilon-cyclase 1 [Vitis vinifera]            356   2e-96

>gb|ABB52073.1| putative lycopene epsilon cyclase [Daucus carota subsp. sativus]
          Length = 530

 Score =  381 bits (979), Expect = e-104
 Identities = 187/205 (91%), Positives = 195/205 (95%)
 Frame = +3

Query: 3   ETCLASKDAMPFDLLKKKLMSRLQTMGIRVTKIYEEEWSYIPVGGSLPNTEQKNLAFGAA 182
           ETCLASKDAMPFDLLKKKLMSRLQTMGIRV K YEEEWSYIPVGGSLPNTEQKNLAFGAA
Sbjct: 321 ETCLASKDAMPFDLLKKKLMSRLQTMGIRVAKTYEEEWSYIPVGGSLPNTEQKNLAFGAA 380

Query: 183 ASMVHPATGYSVVRSLSEAPNYADVIANILKRGHINGVVTRGGYTENISMQAWKTLWPQE 362
           ASMVHPATGYSVVRSLSEAPNYA VIANILK   +NG++  G YTENISMQAWKTLWPQE
Sbjct: 381 ASMVHPATGYSVVRSLSEAPNYAAVIANILKSSQMNGMINYGRYTENISMQAWKTLWPQE 440

Query: 363 RKRQRAFFLFGLAFILQLDIEGIRTFFQTFFRLPTWMWQGFLGSSLSSVDLILFAFYMFI 542
           RKRQRAFFLFGLA ILQLDI+GIRTFFQTFFRLPTWMWQGFLGSSLSSVDL+LFAFYMFI
Sbjct: 441 RKRQRAFFLFGLALILQLDIDGIRTFFQTFFRLPTWMWQGFLGSSLSSVDLVLFAFYMFI 500

Query: 543 IAPHNMRMSLVRHLLSDPTGATMVR 617
           IAPH++RMSLVRHLLSDPTGATMV+
Sbjct: 501 IAPHHLRMSLVRHLLSDPTGATMVK 525


>emb|CBI27881.3| unnamed protein product [Vitis vinifera]
          Length = 448

 Score =  358 bits (919), Expect = 6e-97
 Identities = 174/205 (84%), Positives = 186/205 (90%)
 Frame = +3

Query: 3   ETCLASKDAMPFDLLKKKLMSRLQTMGIRVTKIYEEEWSYIPVGGSLPNTEQKNLAFGAA 182
           ETCLASKDAMPFDLLKKKLMSRL+TMGIR+ + YEEEWSYIPVGGSLPNTEQKNLAFGAA
Sbjct: 239 ETCLASKDAMPFDLLKKKLMSRLETMGIRIIRTYEEEWSYIPVGGSLPNTEQKNLAFGAA 298

Query: 183 ASMVHPATGYSVVRSLSEAPNYADVIANILKRGHINGVVTRGGYTENISMQAWKTLWPQE 362
           ASMVHPATGYSVVRSLSEAP YA VIANILKR H   + TRG  T NISMQAW TLWPQE
Sbjct: 299 ASMVHPATGYSVVRSLSEAPKYASVIANILKRSHSKDIFTRGRSTGNISMQAWNTLWPQE 358

Query: 363 RKRQRAFFLFGLAFILQLDIEGIRTFFQTFFRLPTWMWQGFLGSSLSSVDLILFAFYMFI 542
           RKRQR+FFLFGLA IL+LDIEGIRTFF TFFRLP WMWQGFLGS+LSS DLILFAFYMFI
Sbjct: 359 RKRQRSFFLFGLALILELDIEGIRTFFHTFFRLPNWMWQGFLGSTLSSADLILFAFYMFI 418

Query: 543 IAPHNMRMSLVRHLLSDPTGATMVR 617
           +AP+ MRM L++HLLSDPTGATM+R
Sbjct: 419 LAPNQMRMCLIKHLLSDPTGATMLR 443


>ref|XP_002281164.1| PREDICTED: lycopene epsilon cyclase, chloroplastic [Vitis vinifera]
          Length = 529

 Score =  358 bits (919), Expect = 6e-97
 Identities = 174/205 (84%), Positives = 186/205 (90%)
 Frame = +3

Query: 3   ETCLASKDAMPFDLLKKKLMSRLQTMGIRVTKIYEEEWSYIPVGGSLPNTEQKNLAFGAA 182
           ETCLASKDAMPFDLLKKKLMSRL+TMGIR+ + YEEEWSYIPVGGSLPNTEQKNLAFGAA
Sbjct: 320 ETCLASKDAMPFDLLKKKLMSRLETMGIRIIRTYEEEWSYIPVGGSLPNTEQKNLAFGAA 379

Query: 183 ASMVHPATGYSVVRSLSEAPNYADVIANILKRGHINGVVTRGGYTENISMQAWKTLWPQE 362
           ASMVHPATGYSVVRSLSEAP YA VIANILKR H   + TRG  T NISMQAW TLWPQE
Sbjct: 380 ASMVHPATGYSVVRSLSEAPKYASVIANILKRSHSKDIFTRGRSTGNISMQAWNTLWPQE 439

Query: 363 RKRQRAFFLFGLAFILQLDIEGIRTFFQTFFRLPTWMWQGFLGSSLSSVDLILFAFYMFI 542
           RKRQR+FFLFGLA IL+LDIEGIRTFF TFFRLP WMWQGFLGS+LSS DLILFAFYMFI
Sbjct: 440 RKRQRSFFLFGLALILELDIEGIRTFFHTFFRLPNWMWQGFLGSTLSSADLILFAFYMFI 499

Query: 543 IAPHNMRMSLVRHLLSDPTGATMVR 617
           +AP+ MRM L++HLLSDPTGATM+R
Sbjct: 500 LAPNQMRMCLIKHLLSDPTGATMLR 524


>gb|ADK74376.1| lycopene epsilon cyclase [Camellia sinensis var. assamica]
          Length = 532

 Score =  357 bits (915), Expect = 2e-96
 Identities = 175/205 (85%), Positives = 185/205 (90%)
 Frame = +3

Query: 3   ETCLASKDAMPFDLLKKKLMSRLQTMGIRVTKIYEEEWSYIPVGGSLPNTEQKNLAFGAA 182
           ETCLASKDAMPFDLLKKKLMSRL+TMG+RV K YEEEWSYIPVGGSLPNTEQKNLA GAA
Sbjct: 323 ETCLASKDAMPFDLLKKKLMSRLETMGVRVIKTYEEEWSYIPVGGSLPNTEQKNLALGAA 382

Query: 183 ASMVHPATGYSVVRSLSEAPNYADVIANILKRGHINGVVTRGGYTENISMQAWKTLWPQE 362
           ASMVHPATGY VVRSLSEAP YA VIANILK+GH    ++R   TENISM AW TLWPQE
Sbjct: 383 ASMVHPATGYFVVRSLSEAPKYASVIANILKQGHSRDKLSRSWSTENISMLAWNTLWPQE 442

Query: 363 RKRQRAFFLFGLAFILQLDIEGIRTFFQTFFRLPTWMWQGFLGSSLSSVDLILFAFYMFI 542
           RKRQRAFFLFGLA ILQLDI+GIRTFF TFFRLPTWMWQGFLGS+LSS DL LFAFYMF+
Sbjct: 443 RKRQRAFFLFGLALILQLDIDGIRTFFHTFFRLPTWMWQGFLGSTLSSADLALFAFYMFV 502

Query: 543 IAPHNMRMSLVRHLLSDPTGATMVR 617
           IAP+NMRM LVRHLLSDPTGATM+R
Sbjct: 503 IAPNNMRMCLVRHLLSDPTGATMIR 527


>gb|AFP28798.1| lycopene epsilon-cyclase 1 [Vitis vinifera]
          Length = 530

 Score =  356 bits (914), Expect = 2e-96
 Identities = 173/205 (84%), Positives = 185/205 (90%)
 Frame = +3

Query: 3   ETCLASKDAMPFDLLKKKLMSRLQTMGIRVTKIYEEEWSYIPVGGSLPNTEQKNLAFGAA 182
           ETCLASKDAMPFDLLKKKLMSRL+TMGIR+ + YEEEWSYIPVGGSLPNTEQKNLAFGAA
Sbjct: 321 ETCLASKDAMPFDLLKKKLMSRLETMGIRIIRTYEEEWSYIPVGGSLPNTEQKNLAFGAA 380

Query: 183 ASMVHPATGYSVVRSLSEAPNYADVIANILKRGHINGVVTRGGYTENISMQAWKTLWPQE 362
           ASMVHPATGYSVVRSLSEAP YA VIANILKR H   + TRG  T NI MQAW TLWPQE
Sbjct: 381 ASMVHPATGYSVVRSLSEAPKYASVIANILKRSHSKDIFTRGRSTGNIPMQAWNTLWPQE 440

Query: 363 RKRQRAFFLFGLAFILQLDIEGIRTFFQTFFRLPTWMWQGFLGSSLSSVDLILFAFYMFI 542
           RKRQR+FFLFGLA IL+LDIEGIRTFF TFFRLP WMWQGFLGS+LSS DLILFAFYMFI
Sbjct: 441 RKRQRSFFLFGLALILELDIEGIRTFFHTFFRLPNWMWQGFLGSTLSSADLILFAFYMFI 500

Query: 543 IAPHNMRMSLVRHLLSDPTGATMVR 617
           +AP+ MRM L++HLLSDPTGATM+R
Sbjct: 501 LAPNQMRMCLIKHLLSDPTGATMLR 525


Top