BLASTX nr result
ID: Panax21_contig00028594
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00028594
(1036 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273656.1| PREDICTED: DNA replication complex GINS prot... 289 7e-76
ref|XP_003565172.1| PREDICTED: DNA replication complex GINS prot... 272 9e-71
ref|XP_002463445.1| hypothetical protein SORBIDRAFT_02g043990 [S... 270 3e-70
ref|NP_001042585.1| Os01g0248600 [Oryza sativa Japonica Group] g... 269 9e-70
gb|AAD38294.1|AC007789_20 unknown protein [Oryza sativa Japonica... 269 9e-70
>ref|XP_002273656.1| PREDICTED: DNA replication complex GINS protein PSF2 [Vitis
vinifera] gi|297737295|emb|CBI26496.3| unnamed protein
product [Vitis vinifera]
Length = 210
Score = 289 bits (740), Expect = 7e-76
Identities = 148/201 (73%), Positives = 165/201 (82%), Gaps = 1/201 (0%)
Frame = -2
Query: 888 MASQSEAHGXXXXXXXXXXXXXXEMVEIVPNMRMDPLNLISGDFGPFRPQIATQVPMWLA 709
MA QS+ + EMVEIVPNMRMDPLNLI GDFGPFRPQIATQVP+WLA
Sbjct: 1 MAGQSDPYISLFSAQEVEFLGEDEMVEIVPNMRMDPLNLICGDFGPFRPQIATQVPLWLA 60
Query: 708 VALKKRGKCTIRPPEWMSVEKLTQVLEAERDSARDFQPLPFHYVEISRLLFDHARDDIPE 529
VALKKRGKCTIRPPEWMSV+KLTQVLEAER+S R+FQPLPFHYVEI+RLL DHARDDIP+
Sbjct: 61 VALKKRGKCTIRPPEWMSVDKLTQVLEAERNSLREFQPLPFHYVEIARLLSDHARDDIPD 120
Query: 528 IYMVRSLIEDIKDVRFHKIGTGLEIISERTYAVKLLNLSAMEVNIVRPFVARALETFFKL 349
+YMVRSLIEDI++VRFHK+ TGLE I ERT+AVKL NLSAME NIVRPFV RAL+ F+K
Sbjct: 121 VYMVRSLIEDIRNVRFHKVETGLETIHERTHAVKLKNLSAMEANIVRPFVVRALQAFYKH 180
Query: 348 DSPELIQDADRTD-ARSEVAD 289
DSPE+I D T R +VAD
Sbjct: 181 DSPEMIPQPDTTAIRRRQVAD 201
>ref|XP_003565172.1| PREDICTED: DNA replication complex GINS protein PSF2-like
[Brachypodium distachyon]
Length = 212
Score = 272 bits (696), Expect = 9e-71
Identities = 133/192 (69%), Positives = 159/192 (82%)
Frame = -2
Query: 888 MASQSEAHGXXXXXXXXXXXXXXEMVEIVPNMRMDPLNLISGDFGPFRPQIATQVPMWLA 709
MA QS+ H E+VEIVPN+RM+ LN+I GDFGPF PQIA++VP+WLA
Sbjct: 1 MAGQSDPHLSLFSPSEVEFVAEDEIVEIVPNIRMEALNMICGDFGPFFPQIASKVPLWLA 60
Query: 708 VALKKRGKCTIRPPEWMSVEKLTQVLEAERDSARDFQPLPFHYVEISRLLFDHARDDIPE 529
VALK+RGKCTIRPPEWM+VE+LTQVL+AER+S R+FQPLPFHY+EIS+LLFDHARDDI +
Sbjct: 61 VALKRRGKCTIRPPEWMTVERLTQVLDAERESPREFQPLPFHYIEISKLLFDHARDDISD 120
Query: 528 IYMVRSLIEDIKDVRFHKIGTGLEIISERTYAVKLLNLSAMEVNIVRPFVARALETFFKL 349
Y+VRSLIEDI+DVRFHK+ TGLE IS RT+AVKL NLSAMEVNIVRPF+ R L+ F+K
Sbjct: 121 AYLVRSLIEDIRDVRFHKVETGLETISGRTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKH 180
Query: 348 DSPELIQDADRT 313
DSP++IQ AD T
Sbjct: 181 DSPQMIQQADNT 192
>ref|XP_002463445.1| hypothetical protein SORBIDRAFT_02g043990 [Sorghum bicolor]
gi|241926822|gb|EER99966.1| hypothetical protein
SORBIDRAFT_02g043990 [Sorghum bicolor]
Length = 211
Score = 270 bits (691), Expect = 3e-70
Identities = 133/196 (67%), Positives = 159/196 (81%)
Frame = -2
Query: 888 MASQSEAHGXXXXXXXXXXXXXXEMVEIVPNMRMDPLNLISGDFGPFRPQIATQVPMWLA 709
MA QS+ H E+VEIVPN+RMD LN+I GDFGPF PQI T+VP+WLA
Sbjct: 1 MAGQSDPHLSIFSPSEVEFVAEDEIVEIVPNIRMDALNMICGDFGPFFPQIPTKVPLWLA 60
Query: 708 VALKKRGKCTIRPPEWMSVEKLTQVLEAERDSARDFQPLPFHYVEISRLLFDHARDDIPE 529
VALKKR KCTIR P+WM+V++LTQVLEAER+S R+FQPLPFHY+EIS+LLFDHARDDI +
Sbjct: 61 VALKKRSKCTIRTPDWMTVDRLTQVLEAERESPREFQPLPFHYIEISKLLFDHARDDISD 120
Query: 528 IYMVRSLIEDIKDVRFHKIGTGLEIISERTYAVKLLNLSAMEVNIVRPFVARALETFFKL 349
Y+VRSLIEDI+DVRFHK+ TGLE IS RT+AVKL NLSAMEVNIVRPF+ R L+ F+K
Sbjct: 121 AYLVRSLIEDIRDVRFHKVETGLETISGRTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKH 180
Query: 348 DSPELIQDADRTDARS 301
DSP++IQ AD T +R+
Sbjct: 181 DSPQMIQQADNTGSRA 196
>ref|NP_001042585.1| Os01g0248600 [Oryza sativa Japonica Group]
gi|11320850|dbj|BAB18333.1| putative DNA replication
complex GINS protein PSF2 [Oryza sativa Japonica Group]
gi|113532116|dbj|BAF04499.1| Os01g0248600 [Oryza sativa
Japonica Group] gi|215686405|dbj|BAG87690.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215704757|dbj|BAG94785.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 211
Score = 269 bits (687), Expect = 9e-70
Identities = 131/195 (67%), Positives = 160/195 (82%)
Frame = -2
Query: 888 MASQSEAHGXXXXXXXXXXXXXXEMVEIVPNMRMDPLNLISGDFGPFRPQIATQVPMWLA 709
MA QS+ H E+VEIVPN+RM+ LN+I GDFGPF PQIA++VP+WLA
Sbjct: 1 MAGQSDPHLSIFSPSEVEFVAEDEIVEIVPNIRMEALNMICGDFGPFFPQIASKVPLWLA 60
Query: 708 VALKKRGKCTIRPPEWMSVEKLTQVLEAERDSARDFQPLPFHYVEISRLLFDHARDDIPE 529
VALKKRGKCTIR P+WM+V++LTQVL+AER+S ++FQPLPFHY+EIS+LLFDHARDDI +
Sbjct: 61 VALKKRGKCTIRTPDWMTVDRLTQVLDAERESPKEFQPLPFHYIEISKLLFDHARDDISD 120
Query: 528 IYMVRSLIEDIKDVRFHKIGTGLEIISERTYAVKLLNLSAMEVNIVRPFVARALETFFKL 349
Y+VRSLIEDI+DVRFHK+ TGLE IS RT+AVKL NLSAMEVNIVRPF+ R L+ F+K
Sbjct: 121 AYLVRSLIEDIRDVRFHKVETGLETISGRTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKH 180
Query: 348 DSPELIQDADRTDAR 304
DSP++IQ AD T +R
Sbjct: 181 DSPQMIQQADNTGSR 195
>gb|AAD38294.1|AC007789_20 unknown protein [Oryza sativa Japonica Group]
Length = 276
Score = 269 bits (687), Expect = 9e-70
Identities = 131/195 (67%), Positives = 160/195 (82%)
Frame = -2
Query: 888 MASQSEAHGXXXXXXXXXXXXXXEMVEIVPNMRMDPLNLISGDFGPFRPQIATQVPMWLA 709
MA QS+ H E+VEIVPN+RM+ LN+I GDFGPF PQIA++VP+WLA
Sbjct: 1 MAGQSDPHLSIFSPSEVEFVAEDEIVEIVPNIRMEALNMICGDFGPFFPQIASKVPLWLA 60
Query: 708 VALKKRGKCTIRPPEWMSVEKLTQVLEAERDSARDFQPLPFHYVEISRLLFDHARDDIPE 529
VALKKRGKCTIR P+WM+V++LTQVL+AER+S ++FQPLPFHY+EIS+LLFDHARDDI +
Sbjct: 61 VALKKRGKCTIRTPDWMTVDRLTQVLDAERESPKEFQPLPFHYIEISKLLFDHARDDISD 120
Query: 528 IYMVRSLIEDIKDVRFHKIGTGLEIISERTYAVKLLNLSAMEVNIVRPFVARALETFFKL 349
Y+VRSLIEDI+DVRFHK+ TGLE IS RT+AVKL NLSAMEVNIVRPF+ R L+ F+K
Sbjct: 121 AYLVRSLIEDIRDVRFHKVETGLETISGRTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKH 180
Query: 348 DSPELIQDADRTDAR 304
DSP++IQ AD T +R
Sbjct: 181 DSPQMIQQADNTGSR 195