BLASTX nr result

ID: Panax21_contig00028587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028587
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vit...   147   7e-34
ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|XP_004140896.1| PREDICTED: RING-H2 finger protein ATL7-like ...   138   5e-31
ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like...   134   8e-30
ref|XP_003556277.1| PREDICTED: RING-H2 finger protein ATL1-like ...   132   4e-29

>ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vitis vinifera]
          Length = 228

 Score =  147 bits (372), Expect = 7e-34
 Identities = 73/85 (85%), Positives = 80/85 (94%)
 Frame = +3

Query: 219 MISSGINLVMTVIGFAVSTMFIVFVCTRLICARIQLNASRRSFHISSRSDLSILERGLHG 398
           MIS G+NLVMTVIGFAVSTMFIVFVCTRL+CARIQLNASRRSF ++SRSDLSILERGLHG
Sbjct: 1   MISGGVNLVMTVIGFAVSTMFIVFVCTRLVCARIQLNASRRSFPVASRSDLSILERGLHG 60

Query: 399 LEPLVVANFPTKKYSDPFFNFAEDA 473
           LEP VVANFPTKK++D FF+ AEDA
Sbjct: 61  LEPAVVANFPTKKFADEFFSPAEDA 85


>ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|222864493|gb|EEF01624.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/85 (82%), Positives = 81/85 (95%)
 Frame = +3

Query: 219 MISSGINLVMTVIGFAVSTMFIVFVCTRLICARIQLNASRRSFHISSRSDLSILERGLHG 398
           M++SGINLVMTVIGF+VSTMFIVFVCTRLICARIQLNASRRSF I+SRSDLS+LERGLHG
Sbjct: 1   MMASGINLVMTVIGFSVSTMFIVFVCTRLICARIQLNASRRSFRIASRSDLSMLERGLHG 60

Query: 399 LEPLVVANFPTKKYSDPFFNFAEDA 473
           LEP+V+A+FPTKKY+D  F+ +EDA
Sbjct: 61  LEPVVIASFPTKKYNDKLFSASEDA 85


>ref|XP_004140896.1| PREDICTED: RING-H2 finger protein ATL7-like [Cucumis sativus]
           gi|449528792|ref|XP_004171387.1| PREDICTED: RING-H2
           finger protein ATL7-like [Cucumis sativus]
          Length = 218

 Score =  138 bits (347), Expect = 5e-31
 Identities = 67/85 (78%), Positives = 78/85 (91%)
 Frame = +3

Query: 219 MISSGINLVMTVIGFAVSTMFIVFVCTRLICARIQLNASRRSFHISSRSDLSILERGLHG 398
           M+SSG+NLVMTVIGF VST+FIVFVCTRL+CARI LNASRRSF I+SRSDLS LERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 399 LEPLVVANFPTKKYSDPFFNFAEDA 473
           +EP+VVANFPTKKYSD +F+  ++A
Sbjct: 61  VEPMVVANFPTKKYSDDYFSSMQNA 85


>ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like [Glycine max]
          Length = 229

 Score =  134 bits (337), Expect = 8e-30
 Identities = 68/85 (80%), Positives = 76/85 (89%)
 Frame = +3

Query: 219 MISSGINLVMTVIGFAVSTMFIVFVCTRLICARIQLNASRRSFHISSRSDLSILERGLHG 398
           MISSGINLVMTVIGFAVSTMFIVFVCTRLICARI LNA+RRSF I+SRS+LS++ERG HG
Sbjct: 1   MISSGINLVMTVIGFAVSTMFIVFVCTRLICARIHLNAARRSFPIASRSNLSMMERGCHG 60

Query: 399 LEPLVVANFPTKKYSDPFFNFAEDA 473
           LE + VA FPTKKYSD FF  AE++
Sbjct: 61  LERVTVAKFPTKKYSDKFFAAAENS 85


>ref|XP_003556277.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max]
          Length = 229

 Score =  132 bits (331), Expect = 4e-29
 Identities = 66/85 (77%), Positives = 75/85 (88%)
 Frame = +3

Query: 219 MISSGINLVMTVIGFAVSTMFIVFVCTRLICARIQLNASRRSFHISSRSDLSILERGLHG 398
           MISSGINLVMTVIGFAVSTMFIVFVCTRLICARI +N +RRSF I+SRS+LS++ERG HG
Sbjct: 1   MISSGINLVMTVIGFAVSTMFIVFVCTRLICARIHMNTARRSFPIASRSNLSMMERGCHG 60

Query: 399 LEPLVVANFPTKKYSDPFFNFAEDA 473
           LE + VA FPTKKYSD FF  AE++
Sbjct: 61  LERVTVAKFPTKKYSDKFFAAAENS 85


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