BLASTX nr result

ID: Panax21_contig00028586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028586
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314715.1| predicted protein [Populus trichocarpa] gi|2...   184   6e-45
ref|XP_002517205.1| leucine rich repeat-containing protein, puta...   175   4e-42
ref|XP_002275003.1| PREDICTED: RAN GTPase-activating protein 1 i...   172   3e-41
emb|CAN73875.1| hypothetical protein VITISV_039541 [Vitis vinifera]   172   3e-41
emb|CAN75983.1| hypothetical protein VITISV_012187 [Vitis vinifera]   171   6e-41

>ref|XP_002314715.1| predicted protein [Populus trichocarpa] gi|222863755|gb|EEF00886.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  184 bits (467), Expect = 6e-45
 Identities = 91/137 (66%), Positives = 109/137 (79%)
 Frame = -1

Query: 412 SIADVLKEAVPSLKVLEMAGNDITXXXXXXXXXXXXAKQHLTKLNLSENELKDGGIIPIS 233
           +IA  LKE+ PSL+VL++AGNDIT             KQHLTKLNL+ENELKD G I IS
Sbjct: 374 AIARALKESAPSLEVLDIAGNDITAEAAPIVAACIAEKQHLTKLNLAENELKDEGAIQIS 433

Query: 232 KALEDGHVELAEVDMSSNSLRRVGARVLAQAVVDKPKFKLLNVDGNFISDEGVDELKQIF 53
           K LE+GH++L EVDMS NS+RR GARVLA+ VV KP+FK LN+DGNFISDEG+DE+K++F
Sbjct: 434 KVLEEGHLQLKEVDMSINSIRRAGARVLARVVVQKPEFKFLNIDGNFISDEGIDEVKEMF 493

Query: 52  KKSPDMLGSFDENDPEG 2
           +K PD LGSFDENDPEG
Sbjct: 494 EKFPDRLGSFDENDPEG 510


>ref|XP_002517205.1| leucine rich repeat-containing protein, putative [Ricinus communis]
           gi|223543840|gb|EEF45368.1| leucine rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 549

 Score =  175 bits (443), Expect = 4e-42
 Identities = 88/137 (64%), Positives = 109/137 (79%)
 Frame = -1

Query: 412 SIADVLKEAVPSLKVLEMAGNDITXXXXXXXXXXXXAKQHLTKLNLSENELKDGGIIPIS 233
           +IA+ LKE+ P+L+VL+MAGNDIT             KQ+L KLNL+ENELKD G I IS
Sbjct: 383 AIANALKESAPALEVLDMAGNDITAEAAPVVSACVELKQNLIKLNLAENELKDEGAIQIS 442

Query: 232 KALEDGHVELAEVDMSSNSLRRVGARVLAQAVVDKPKFKLLNVDGNFISDEGVDELKQIF 53
           KALE+GHV+L EVDMS+NS+ RVGARVLAQ +V KP+FKLLN++ N ISDEG+DE+K+IF
Sbjct: 443 KALEEGHVQLKEVDMSTNSIGRVGARVLAQVMVQKPEFKLLNINENCISDEGIDEVKEIF 502

Query: 52  KKSPDMLGSFDENDPEG 2
           KK P+MLG  DEN+PEG
Sbjct: 503 KKCPEMLGPLDENNPEG 519


>ref|XP_002275003.1| PREDICTED: RAN GTPase-activating protein 1 isoform 2 [Vitis
           vinifera] gi|225436922|ref|XP_002274973.1| PREDICTED:
           RAN GTPase-activating protein 1 isoform 1 [Vitis
           vinifera]
          Length = 541

 Score =  172 bits (435), Expect = 3e-41
 Identities = 88/137 (64%), Positives = 105/137 (76%)
 Frame = -1

Query: 412 SIADVLKEAVPSLKVLEMAGNDITXXXXXXXXXXXXAKQHLTKLNLSENELKDGGIIPIS 233
           +IA+ LKE+ PSL+VLEMAGNDIT            AKQ L KL+L+ENELKD G I IS
Sbjct: 374 AIANALKESTPSLEVLEMAGNDITVEAASTLAACIAAKQCLAKLSLAENELKDEGAILIS 433

Query: 232 KALEDGHVELAEVDMSSNSLRRVGARVLAQAVVDKPKFKLLNVDGNFISDEGVDELKQIF 53
           KALE+GH +L EVD+++NS+RR GAR LAQ V  KP FKLLN++GNFISDEG+DE+K IF
Sbjct: 434 KALEEGHNQLTEVDLNTNSIRRAGARFLAQTVASKPGFKLLNINGNFISDEGIDEVKDIF 493

Query: 52  KKSPDMLGSFDENDPEG 2
           K  PD+LG  DENDPEG
Sbjct: 494 KNCPDVLGPLDENDPEG 510


>emb|CAN73875.1| hypothetical protein VITISV_039541 [Vitis vinifera]
          Length = 541

 Score =  172 bits (435), Expect = 3e-41
 Identities = 88/137 (64%), Positives = 105/137 (76%)
 Frame = -1

Query: 412 SIADVLKEAVPSLKVLEMAGNDITXXXXXXXXXXXXAKQHLTKLNLSENELKDGGIIPIS 233
           +IA+ LKE+ PSL+VLEMAGNDIT            AKQ L KL+L+ENELKD G I IS
Sbjct: 374 AIANALKESTPSLEVLEMAGNDITVEAASTLAACIAAKQCLAKLSLAENELKDEGAILIS 433

Query: 232 KALEDGHVELAEVDMSSNSLRRVGARVLAQAVVDKPKFKLLNVDGNFISDEGVDELKQIF 53
           KALE+GH +L EVD+++NS+RR GAR LAQ V  KP FKLLN++GNFISDEG+DE+K IF
Sbjct: 434 KALEEGHNQLTEVDLNTNSIRRAGARFLAQTVASKPGFKLLNINGNFISDEGIDEVKDIF 493

Query: 52  KKSPDMLGSFDENDPEG 2
           K  PD+LG  DENDPEG
Sbjct: 494 KNCPDVLGPLDENDPEG 510


>emb|CAN75983.1| hypothetical protein VITISV_012187 [Vitis vinifera]
          Length = 539

 Score =  171 bits (433), Expect = 6e-41
 Identities = 88/137 (64%), Positives = 107/137 (78%)
 Frame = -1

Query: 412 SIADVLKEAVPSLKVLEMAGNDITXXXXXXXXXXXXAKQHLTKLNLSENELKDGGIIPIS 233
           +IA+VLKE+  +L+VLEMAGNDIT            AKQ +TKLNL+ENEL+D G I IS
Sbjct: 374 AIANVLKESASALEVLEMAGNDITAEAAPALAACIAAKQLITKLNLAENELRDEGAIQIS 433

Query: 232 KALEDGHVELAEVDMSSNSLRRVGARVLAQAVVDKPKFKLLNVDGNFISDEGVDELKQIF 53
           KALEDGH +L EVD+SSN +RR GAR LA+AVV KP  KLLN++GNFISDEG+DE+K IF
Sbjct: 434 KALEDGHAQLKEVDLSSNFMRRAGARCLARAVVHKPGLKLLNINGNFISDEGIDEVKSIF 493

Query: 52  KKSPDMLGSFDENDPEG 2
            + P++LGS DENDPEG
Sbjct: 494 NEFPNVLGSLDENDPEG 510


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