BLASTX nr result

ID: Panax21_contig00028577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028577
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_086987.1| ribosomal protein L33 [Panax ginseng] gi|680530...   142   2e-31
ref|YP_004935573.1| ribosomal protein L33 (chloroplast) [Eleuthe...   139   2e-30
gb|ADM92730.1| ribosomal protein L33 [Davidia involucrata]            138   3e-30
ref|YP_007317269.1| ribosomal protein L33 (chloroplast) [Camelli...   138   3e-30
ref|YP_004222667.1| ribosomal protein L33 [Anthriscus cerefolium...   138   3e-30

>ref|YP_086987.1| ribosomal protein L33 [Panax ginseng]
            gi|68053098|sp|Q68RY5.1|RK33_PANGI RecName: Full=50S
            ribosomal protein L33, chloroplastic
            gi|51235334|gb|AAT98530.1| ribosomal protein L33 [Panax
            ginseng]
          Length = 66

 Score =  142 bits (358), Expect = 2e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 839  MAKGKDVRITVILECTSCVRNGVNKVSTGISRYITQKNRHNTPNRLELRKFCPYCYKHTI 1018
            MAKGKDVRITVILECTSCVRNGVNKVSTGISRYITQKNRHNTPNRLELRKFCPYCYKHTI
Sbjct: 1    MAKGKDVRITVILECTSCVRNGVNKVSTGISRYITQKNRHNTPNRLELRKFCPYCYKHTI 60

Query: 1019 HGEIKK 1036
            HGEIKK
Sbjct: 61   HGEIKK 66


>ref|YP_004935573.1| ribosomal protein L33 (chloroplast) [Eleutherococcus senticosus]
            gi|347448228|gb|AEO92640.1| ribosomal protein L33
            (chloroplast) [Eleutherococcus senticosus]
          Length = 66

 Score =  139 bits (349), Expect = 2e-30
 Identities = 64/66 (96%), Positives = 65/66 (98%)
 Frame = +2

Query: 839  MAKGKDVRITVILECTSCVRNGVNKVSTGISRYITQKNRHNTPNRLELRKFCPYCYKHTI 1018
            MAKGKDVRITVILEC SCVRNGVNKVSTGISRYITQ+NRHNTPNRLELRKFCPYCYKHTI
Sbjct: 1    MAKGKDVRITVILECISCVRNGVNKVSTGISRYITQRNRHNTPNRLELRKFCPYCYKHTI 60

Query: 1019 HGEIKK 1036
            HGEIKK
Sbjct: 61   HGEIKK 66


>gb|ADM92730.1| ribosomal protein L33 [Davidia involucrata]
          Length = 66

 Score =  138 bits (348), Expect = 3e-30
 Identities = 63/66 (95%), Positives = 65/66 (98%)
 Frame = +2

Query: 839  MAKGKDVRITVILECTSCVRNGVNKVSTGISRYITQKNRHNTPNRLELRKFCPYCYKHTI 1018
            MAKGKDVR+TVILECTSCVRNGVNK STGISRYITQKNRHNTPNRLELRKFCPYC+KHTI
Sbjct: 1    MAKGKDVRVTVILECTSCVRNGVNKASTGISRYITQKNRHNTPNRLELRKFCPYCHKHTI 60

Query: 1019 HGEIKK 1036
            HGEIKK
Sbjct: 61   HGEIKK 66


>ref|YP_007317269.1| ribosomal protein L33 (chloroplast) [Camellia sinensis]
            gi|430728293|gb|AGA55617.1| ribosomal protein L33
            (chloroplast) [Camellia sinensis]
          Length = 66

 Score =  138 bits (347), Expect = 3e-30
 Identities = 63/66 (95%), Positives = 64/66 (96%)
 Frame = +2

Query: 839  MAKGKDVRITVILECTSCVRNGVNKVSTGISRYITQKNRHNTPNRLELRKFCPYCYKHTI 1018
            MAKGKDVR+TVILEC SCVRNGVNK STGISRYITQKNRHNTPNRLELRKFCPYCYKHTI
Sbjct: 1    MAKGKDVRVTVILECISCVRNGVNKASTGISRYITQKNRHNTPNRLELRKFCPYCYKHTI 60

Query: 1019 HGEIKK 1036
            HGEIKK
Sbjct: 61   HGEIKK 66


>ref|YP_004222667.1| ribosomal protein L33 [Anthriscus cerefolium]
            gi|289645596|gb|ADD13659.1| ribosomal protein L33
            [Anthriscus cerefolium]
          Length = 66

 Score =  138 bits (347), Expect = 3e-30
 Identities = 63/66 (95%), Positives = 65/66 (98%)
 Frame = +2

Query: 839  MAKGKDVRITVILECTSCVRNGVNKVSTGISRYITQKNRHNTPNRLELRKFCPYCYKHTI 1018
            MAKGKDVRITVILECT CVRNGVNKVSTGISRYIT+KNRHNTPNRLELRKFCP+CYKHTI
Sbjct: 1    MAKGKDVRITVILECTGCVRNGVNKVSTGISRYITEKNRHNTPNRLELRKFCPFCYKHTI 60

Query: 1019 HGEIKK 1036
            HGEIKK
Sbjct: 61   HGEIKK 66


Top