BLASTX nr result

ID: Panax21_contig00028569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028569
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29262.3| unnamed protein product [Vitis vinifera]              176   1e-42
ref|XP_002267902.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR...   174   5e-42
ref|XP_002512671.1| zinc finger protein, putative [Ricinus commu...   172   3e-41
ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   167   8e-40
ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR...   167   8e-40

>emb|CBI29262.3| unnamed protein product [Vitis vinifera]
          Length = 803

 Score =  176 bits (447), Expect = 1e-42
 Identities = 88/158 (55%), Positives = 105/158 (66%), Gaps = 9/158 (5%)
 Frame = +3

Query: 3   CMVCKKKPTEDESLTCNTCVTPWHVTCLSIRPQTLAHAAQW--------DCPDCSFVANP 158
           CM+C++KP++DES+TC TC TPWHVTCLS+RP+TLA A QW        +CPDCS     
Sbjct: 15  CMICRRKPSDDESITCKTCATPWHVTCLSVRPETLADALQWQVADALQWECPDCSPAVGE 74

Query: 159 GGPTFAPVNSAFPERSG-LVAAIRVIEDDQSLTQQEKAKRRQYLLSGGGQMSTEAANHEN 335
             P         PE SG L+AAIR IE D SLT+QEKAKRRQ LLSG  +  +      N
Sbjct: 75  RDP---------PEGSGDLIAAIRAIESDGSLTEQEKAKRRQELLSGTVRSGSPEEGSPN 125

Query: 336 AINGGGNDILNLLDERLNCSFCLQLPERPVTTPCGHNF 449
               GG D+L++LD  LNCS C+QL ERPVTTPCGHNF
Sbjct: 126 KRKNGGRDVLDILDGSLNCSVCMQLLERPVTTPCGHNF 163


>ref|XP_002267902.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Vitis
           vinifera]
          Length = 815

 Score =  174 bits (442), Expect = 5e-42
 Identities = 88/161 (54%), Positives = 107/161 (66%), Gaps = 12/161 (7%)
 Frame = +3

Query: 3   CMVCKKKPTEDESLTCNTCVTPWHVTCLSIRPQTLAHAAQW--------DCPDCSFVANP 158
           CM+C++KP++DES+TC TC TPWHVTCLS+RP+TLA A QW        +CPDCS     
Sbjct: 15  CMICRRKPSDDESITCKTCATPWHVTCLSVRPETLADALQWQVADALQWECPDCSPAVGE 74

Query: 159 GGP---TFAPVNSAFPERSG-LVAAIRVIEDDQSLTQQEKAKRRQYLLSGGGQMSTEAAN 326
             P   +   V +   E SG L+AAIR IE D SLT+QEKAKRRQ LLSG  +  +    
Sbjct: 75  RDPPEVSETAVAAGGSEGSGDLIAAIRAIESDGSLTEQEKAKRRQELLSGTVRSGSPEEG 134

Query: 327 HENAINGGGNDILNLLDERLNCSFCLQLPERPVTTPCGHNF 449
             N    GG D+L++LD  LNCS C+QL ERPVTTPCGHNF
Sbjct: 135 SPNKRKNGGRDVLDILDGSLNCSVCMQLLERPVTTPCGHNF 175


>ref|XP_002512671.1| zinc finger protein, putative [Ricinus communis]
           gi|223548632|gb|EEF50123.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 735

 Score =  172 bits (435), Expect = 3e-41
 Identities = 83/149 (55%), Positives = 104/149 (69%)
 Frame = +3

Query: 3   CMVCKKKPTEDESLTCNTCVTPWHVTCLSIRPQTLAHAAQWDCPDCSFVANPGGPTFAPV 182
           CM+CK KP+ D+SLTC TC TPWH+TCLS  P+T A A QW+CPDCS +     PT +  
Sbjct: 15  CMICKTKPSPDDSLTCRTCDTPWHLTCLSSPPETSADALQWNCPDCSIL----NPTLSRG 70

Query: 183 NSAFPERSGLVAAIRVIEDDQSLTQQEKAKRRQYLLSGGGQMSTEAANHENAINGGGNDI 362
           + A    S L+AAIR+IE D SL++ EKAKRRQ L+SGG    +     +  I  G N+I
Sbjct: 71  SEA--TSSALIAAIRMIESDVSLSESEKAKRRQQLVSGGAPSCSGVEEEKERIT-GSNEI 127

Query: 363 LNLLDERLNCSFCLQLPERPVTTPCGHNF 449
           L++LD   NCSFC+QLP+RPVTTPCGHNF
Sbjct: 128 LDILDAGFNCSFCMQLPDRPVTTPCGHNF 156


>ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ORTHRUS
           2-like [Cucumis sativus]
          Length = 688

 Score =  167 bits (423), Expect = 8e-40
 Identities = 84/153 (54%), Positives = 103/153 (67%), Gaps = 4/153 (2%)
 Frame = +3

Query: 3   CMVCKKKPTEDESLTCNTCVTPWHVTCLSIRPQTLAHAAQWDCPDCSFVANPGGPTFAPV 182
           CM+CK KP++ E++TC TCVTPWHV+CLS  P+TLA   QWDCPDCS    P      P 
Sbjct: 33  CMLCKAKPSDVETITCKTCVTPWHVSCLSSPPETLASTLQWDCPDCS---TPPEDVILPP 89

Query: 183 --NSAFP--ERSGLVAAIRVIEDDQSLTQQEKAKRRQYLLSGGGQMSTEAANHENAINGG 350
             N +FP    S LV +IR IE D SLT +EKA +RQ LLSG  Q   +  +        
Sbjct: 90  PGNHSFPTAPSSDLVTSIRAIEADVSLTDREKANKRQELLSGKLQSDKDDHDTNKEKIKK 149

Query: 351 GNDILNLLDERLNCSFCLQLPERPVTTPCGHNF 449
           G+++ +L+DERLNCSFC+QLPERPVTTPCGHNF
Sbjct: 150 GDNVFDLIDERLNCSFCMQLPERPVTTPCGHNF 182


>ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis
           sativus]
          Length = 667

 Score =  167 bits (423), Expect = 8e-40
 Identities = 84/153 (54%), Positives = 103/153 (67%), Gaps = 4/153 (2%)
 Frame = +3

Query: 3   CMVCKKKPTEDESLTCNTCVTPWHVTCLSIRPQTLAHAAQWDCPDCSFVANPGGPTFAPV 182
           CM+CK KP++ E++TC TCVTPWHV+CLS  P+TLA   QWDCPDCS    P      P 
Sbjct: 33  CMLCKAKPSDVETITCKTCVTPWHVSCLSSPPETLASTLQWDCPDCS---TPPEDVILPP 89

Query: 183 --NSAFP--ERSGLVAAIRVIEDDQSLTQQEKAKRRQYLLSGGGQMSTEAANHENAINGG 350
             N +FP    S LV +IR IE D SLT +EKA +RQ LLSG  Q   +  +        
Sbjct: 90  PGNHSFPTAPSSDLVTSIRAIEADVSLTDREKANKRQELLSGKLQSDKDDHDTNKEKIKK 149

Query: 351 GNDILNLLDERLNCSFCLQLPERPVTTPCGHNF 449
           G+++ +L+DERLNCSFC+QLPERPVTTPCGHNF
Sbjct: 150 GDNVFDLIDERLNCSFCMQLPERPVTTPCGHNF 182


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