BLASTX nr result

ID: Panax21_contig00028567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028567
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38131.1| unknown [Lotus japonicus]                              186   2e-45
ref|XP_002331200.1| predicted protein [Populus trichocarpa] gi|2...   186   3e-45
gb|AFK35704.1| unknown [Lotus japonicus]                              184   8e-45
ref|XP_002303236.1| predicted protein [Populus trichocarpa] gi|2...   181   7e-44
ref|XP_002532721.1| conserved hypothetical protein [Ricinus comm...   179   2e-43

>gb|AFK38131.1| unknown [Lotus japonicus]
          Length = 180

 Score =  186 bits (473), Expect = 2e-45
 Identities = 96/156 (61%), Positives = 117/156 (75%), Gaps = 13/156 (8%)
 Frame = +2

Query: 32  SEAMVMNPNNVTTTESTAKLTVQNDVEFAKCDCCELTEECTPAYIDRIRQRFQGKWICGL 211
           S+ MV++        +T+ L  Q+DVEFA CDCC LTEECTPAYI+RIR+R+ GKW+CGL
Sbjct: 7   SDPMVISAVPEAQPATTSILVAQSDVEFAVCDCCGLTEECTPAYIERIRERYHGKWVCGL 66

Query: 212 CAEAVNYEM----RLVSTEEALIQHMSFCNQFKSSVPPPNPAVHLISAMRRILRRSLDSP 379
           CAEA+  E+    RLVSTEEA+++HM+FC +F SS PPPNPAVHLISAMR+ILRRSLDSP
Sbjct: 67  CAEAIKDEIVRSERLVSTEEAMMKHMNFCKKFNSSGPPPNPAVHLISAMRQILRRSLDSP 126

Query: 380 RALRSMPSSPTKR---------EGLSRSESCIPALS 460
           R +RS PSSPTK+          GL+RSESC   LS
Sbjct: 127 R-VRSTPSSPTKKTSRAIRGGSSGLARSESCFSTLS 161


>ref|XP_002331200.1| predicted protein [Populus trichocarpa] gi|222873321|gb|EEF10452.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  186 bits (471), Expect = 3e-45
 Identities = 95/156 (60%), Positives = 117/156 (75%), Gaps = 13/156 (8%)
 Frame = +2

Query: 32  SEAMVMN-PNNVTTTESTA--KLTVQNDVEFAKCDCCELTEECTPAYIDRIRQRFQGKWI 202
           S+ MV++ P    T  +T   KL  Q +VE AKCDCC LTEECTPAYI+R+R+R+ GKWI
Sbjct: 7   SDPMVVSAPETQATAAATTVTKLIAQIEVESAKCDCCGLTEECTPAYIERVRERYHGKWI 66

Query: 203 CGLCAEAVNYEM----RLVSTEEALIQHMSFCNQFKSSVPPPNPAVHLISAMRRILRRSL 370
           CGLCAEA+  E+    RL+STEEA+ +HM+FC +F SS PPP+P +HLI+AMR+ILRRSL
Sbjct: 67  CGLCAEAIKDEIVRTERLISTEEAMAKHMNFCKKFVSSGPPPDPTIHLIAAMRQILRRSL 126

Query: 371 DSPRALRSMPSSPTKREG------LSRSESCIPALS 460
           DSPR LRS PSSPTK +G      L+RSESC P LS
Sbjct: 127 DSPRGLRSTPSSPTKTKGESRAAALTRSESCFPTLS 162


>gb|AFK35704.1| unknown [Lotus japonicus]
          Length = 180

 Score =  184 bits (467), Expect = 8e-45
 Identities = 95/156 (60%), Positives = 116/156 (74%), Gaps = 13/156 (8%)
 Frame = +2

Query: 32  SEAMVMNPNNVTTTESTAKLTVQNDVEFAKCDCCELTEECTPAYIDRIRQRFQGKWICGL 211
           S+ MV++        +T+ L  Q+DVEFA CDCC LTEECTPAYI+RIR+R+ GKW+CGL
Sbjct: 7   SDPMVISAVPEAQPATTSILVAQSDVEFAVCDCCGLTEECTPAYIERIRERYHGKWVCGL 66

Query: 212 CAEAVNYEM----RLVSTEEALIQHMSFCNQFKSSVPPPNPAVHLISAMRRILRRSLDSP 379
           CAEA+  E+    RLVSTEEA+++HM+FC +F SS PPPNPAVHLISAMR+ILRRSLDSP
Sbjct: 67  CAEAIKDEIVRFERLVSTEEAMMKHMNFCKKFNSSGPPPNPAVHLISAMRQILRRSLDSP 126

Query: 380 RALRSMPSSPTKR---------EGLSRSESCIPALS 460
           R +RS PSSPTK+          GL+R ESC   LS
Sbjct: 127 R-VRSTPSSPTKKTSRAIRGGSSGLARFESCFSTLS 161


>ref|XP_002303236.1| predicted protein [Populus trichocarpa] gi|222840668|gb|EEE78215.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  181 bits (459), Expect = 7e-44
 Identities = 92/160 (57%), Positives = 113/160 (70%), Gaps = 17/160 (10%)
 Frame = +2

Query: 32  SEAMVMNPNNVTTTESTA-------KLTVQNDVEFAKCDCCELTEECTPAYIDRIRQRFQ 190
           S+ MV++      T + A       +L  Q +VE  KCDCC L EECTPAYI+R+R+R+ 
Sbjct: 7   SDPMVVSAPETQATAAAAAAATTATQLIAQIEVESVKCDCCGLIEECTPAYIERVRERYH 66

Query: 191 GKWICGLCAEAVNYEM----RLVSTEEALIQHMSFCNQFKSSVPPPNPAVHLISAMRRIL 358
           GKWICGLCAEA+ YE+    RL+STEEA+ +HM+FC +F SS PPP+P  HLI+AMR+IL
Sbjct: 67  GKWICGLCAEAIKYEIVRTERLISTEEAMTKHMNFCKKFVSSGPPPDPTTHLIAAMRQIL 126

Query: 359 RRSLDSPRALRSMPSSPTKREG------LSRSESCIPALS 460
           RRSLDSPR LRS PSSP K  G      L+RSESC PALS
Sbjct: 127 RRSLDSPRGLRSTPSSPNKTNGAIRAAALARSESCFPALS 166


>ref|XP_002532721.1| conserved hypothetical protein [Ricinus communis]
           gi|223527529|gb|EEF29652.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 168

 Score =  179 bits (455), Expect = 2e-43
 Identities = 88/142 (61%), Positives = 105/142 (73%), Gaps = 10/142 (7%)
 Frame = +2

Query: 65  TTTESTAKLTVQNDVEFAKCDCCELTEECTPAYIDRIRQRFQGKWICGLCAEAVNYEM-- 238
           T T        Q +VE  KC+CC LTEECTPAYI+R+R+R+ GKWICGLCAEAV  E+  
Sbjct: 26  TATNMLISTAAQTEVESVKCECCVLTEECTPAYIERVRERYHGKWICGLCAEAVKDEIVR 85

Query: 239 ---RLVSTEEALIQHMSFCNQFKSSVPPPNPAVHLISAMRRILRRSLDSPRALRSMPSSP 409
              RL+STEEA+ +HMSFC +F SS PPP+P VHLISAMR+ILR+SLDSPR LRS P+SP
Sbjct: 86  STERLISTEEAMARHMSFCKKFVSSGPPPDPTVHLISAMRQILRKSLDSPRGLRSTPTSP 145

Query: 410 T-----KREGLSRSESCIPALS 460
           T     +  GL+RSESC P LS
Sbjct: 146 TNYGKIRAAGLTRSESCFPTLS 167


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