BLASTX nr result

ID: Panax21_contig00028555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028555
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABS72192.1| mitochondrial NADH-ubiquinone oxidoreductase [Cor...   139   2e-31
ref|XP_002276949.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   136   2e-30
ref|XP_004151845.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   135   5e-30
ref|XP_002520027.1| conserved hypothetical protein [Ricinus comm...   134   6e-30
gb|AFK34710.1| unknown [Medicago truncatula]                          134   8e-30

>gb|ABS72192.1| mitochondrial NADH-ubiquinone oxidoreductase [Corchorus olitorius]
          Length = 103

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/104 (64%), Positives = 79/104 (75%), Gaps = 3/104 (2%)
 Frame = -1

Query: 375 LEACVQARNEG---RDLAREGSEIIREAAKWSPELAAACEATDKKSPMELINEVPPIKVE 205
           L+  +++ N G   R+ +  GS+I +  AKW  +       T KKSPMELINEVPPIKVE
Sbjct: 7   LKTLIRSSNLGSTTRNFSLVGSQISKHTAKWMQD-------TSKKSPMELINEVPPIKVE 59

Query: 204 GRIVACEGDTNPALGHPIEFICLDKDEPAICKYCGLRYVQDHHH 73
            RIVACEGDTNPALGHPIEFICLDK EPA+CKYCGLRY+Q+HHH
Sbjct: 60  DRIVACEGDTNPALGHPIEFICLDKKEPAVCKYCGLRYIQEHHH 103


>ref|XP_002276949.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6,
           mitochondrial [Vitis vinifera]
           gi|297737324|emb|CBI26525.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/102 (64%), Positives = 71/102 (69%)
 Frame = -1

Query: 378 ALEACVQARNEGRDLAREGSEIIREAAKWSPELAAACEATDKKSPMELINEVPPIKVEGR 199
           AL   +   +  R L     +I    AKW  +       T KKSPMELINEVPPIKVE R
Sbjct: 8   ALTTSLNRPSNSRSLCLVSGQISNHTAKWMQD-------TSKKSPMELINEVPPIKVEAR 60

Query: 198 IVACEGDTNPALGHPIEFICLDKDEPAICKYCGLRYVQDHHH 73
           IVACEGDTNPALGHPIEFICLD  EPA+CKYCGLRYVQDHHH
Sbjct: 61  IVACEGDTNPALGHPIEFICLDLKEPAVCKYCGLRYVQDHHH 102


>ref|XP_004151845.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6,
           mitochondrial-like [Cucumis sativus]
           gi|449517961|ref|XP_004166012.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 6,
           mitochondrial-like [Cucumis sativus]
          Length = 103

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/104 (61%), Positives = 77/104 (74%)
 Frame = -1

Query: 384 RVALEACVQARNEGRDLAREGSEIIREAAKWSPELAAACEATDKKSPMELINEVPPIKVE 205
           +V LE+     +  R+L+   ++I +  AKW  +       T KKSPMELINEVPPIKV 
Sbjct: 7   KVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQD-------TSKKSPMELINEVPPIKVA 59

Query: 204 GRIVACEGDTNPALGHPIEFICLDKDEPAICKYCGLRYVQDHHH 73
           GRIVACEGD+NPALGHPIEFICLD++EPA+CKYCGLRY Q HHH
Sbjct: 60  GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQGHHH 103


>ref|XP_002520027.1| conserved hypothetical protein [Ricinus communis]
           gi|223540791|gb|EEF42351.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 102

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/90 (70%), Positives = 70/90 (77%)
 Frame = -1

Query: 342 RDLAREGSEIIREAAKWSPELAAACEATDKKSPMELINEVPPIKVEGRIVACEGDTNPAL 163
           R+ +   S+I    AKW  +       T KKSPMELINE+PPIKVEGRIVACEGDTNPAL
Sbjct: 20  RNFSLVTSQISNHTAKWMQD-------TTKKSPMELINEIPPIKVEGRIVACEGDTNPAL 72

Query: 162 GHPIEFICLDKDEPAICKYCGLRYVQDHHH 73
           GHPIEFICLD  +PA+CKYCGLRYVQDHHH
Sbjct: 73  GHPIEFICLDLKQPAVCKYCGLRYVQDHHH 102


>gb|AFK34710.1| unknown [Medicago truncatula]
          Length = 105

 Score =  134 bits (337), Expect = 8e-30
 Identities = 65/105 (61%), Positives = 72/105 (68%)
 Frame = -1

Query: 387 NRVALEACVQARNEGRDLAREGSEIIREAAKWSPELAAACEATDKKSPMELINEVPPIKV 208
           N     +     N  R  +   S+I    AKW  +       T KKSPMELINEVPPIKV
Sbjct: 8   NLTRFSSSTATTNATRSFSLVTSQISNHTAKWMQD-------TSKKSPMELINEVPPIKV 60

Query: 207 EGRIVACEGDTNPALGHPIEFICLDKDEPAICKYCGLRYVQDHHH 73
           EGRIVACEGDT+PALGHPIE+ICLD  EPA+CKYCGLRYVQDHHH
Sbjct: 61  EGRIVACEGDTDPALGHPIEYICLDLAEPAVCKYCGLRYVQDHHH 105


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