BLASTX nr result

ID: Panax21_contig00028545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028545
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276483.1| PREDICTED: uncharacterized protein LOC100243...   253   3e-65
ref|XP_002531891.1| conserved hypothetical protein [Ricinus comm...   246   3e-63
emb|CAN69676.1| hypothetical protein VITISV_027733 [Vitis vinifera]   244   1e-62
ref|XP_002325601.1| predicted protein [Populus trichocarpa] gi|1...   239   3e-61
ref|XP_003520180.1| PREDICTED: uncharacterized protein LOC100813...   222   5e-56

>ref|XP_002276483.1| PREDICTED: uncharacterized protein LOC100243911 [Vitis vinifera]
          Length = 201

 Score =  253 bits (645), Expect = 3e-65
 Identities = 133/199 (66%), Positives = 150/199 (75%), Gaps = 14/199 (7%)
 Frame = +2

Query: 2   PKNSHKRKPWYQRAMEMATQWKTFSKSTEIPTTNSTLWXXXXXXXXXXXXXXXX------ 163
           PKN + RKPWYQRAMEMAT WKT SKSTEIPT N+TLW                      
Sbjct: 4   PKNPNTRKPWYQRAMEMATLWKTISKSTEIPTANTTLWKTISKSAAIRTTTTTTTTTTNP 63

Query: 164 NKPKLRKCTSLRVATSFTRVCLCAPISSYTEVFQSEIPPRRSNSYPRSKPFPTSPQERMP 343
           ++ KLRKCTSLRVATSFTRVCLCAPISSYTEVF++E+PPRRSNSYPRSKPFP SPQER+ 
Sbjct: 64  HRQKLRKCTSLRVATSFTRVCLCAPISSYTEVFRAELPPRRSNSYPRSKPFP-SPQERIS 122

Query: 344 SARISM--------EGRKIFRGKSLTDDVLMRRFVVEEEAMMQIKRRNQMEIIXXXXXXX 499
           +ARISM        EGR++FRGKSLTDDVLMRRFVVEEEAM+Q++RRNQME+I       
Sbjct: 123 NARISMEGSARVSAEGRRVFRGKSLTDDVLMRRFVVEEEAMIQVRRRNQMEVIRRRSAMR 182

Query: 500 XXXLGPSPLSRMVLAELDE 556
              LGPSPLSRMV+AE +E
Sbjct: 183 RKKLGPSPLSRMVMAEEEE 201


>ref|XP_002531891.1| conserved hypothetical protein [Ricinus communis]
           gi|223528458|gb|EEF30490.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 223

 Score =  246 bits (628), Expect = 3e-63
 Identities = 130/203 (64%), Positives = 146/203 (71%), Gaps = 24/203 (11%)
 Frame = +2

Query: 20  RKPWYQRAMEMATQWKTFSKSTEIPTTNSTLWXXXXXXXXXXXXXXXX------------ 163
           RKPWYQRA+EMATQWKT SKSTE+P+TNSTLW                            
Sbjct: 10  RKPWYQRAIEMATQWKTISKSTEVPSTNSTLWKLSNPKEIPTTNATLWKSISKSTEIPIT 69

Query: 164 ------------NKPKLRKCTSLRVATSFTRVCLCAPISSYTEVFQSEIPPRRSNSYPRS 307
                       N+ KLRKCTSLRVATSFTRVCLCAPISSY EVF+++IPPRRSNSYPRS
Sbjct: 70  TTTTTTTVTTNPNRGKLRKCTSLRVATSFTRVCLCAPISSYNEVFRADIPPRRSNSYPRS 129

Query: 308 KPFPTSPQERMPSARISMEGRKIFRGKSLTDDVLMRRFVVEEEAMMQIKRRNQMEIIXXX 487
           KPFPT+ QER+PSAR S EGR++FRGKSLTDDVLMRRFVVEEEAMMQI+RRNQME+I   
Sbjct: 130 KPFPTT-QERIPSARHSTEGRRVFRGKSLTDDVLMRRFVVEEEAMMQIRRRNQMEVIRKR 188

Query: 488 XXXXXXXLGPSPLSRMVLAELDE 556
                  LGPSPLS+MV+AE +E
Sbjct: 189 NMMRRKKLGPSPLSKMVMAEEEE 211


>emb|CAN69676.1| hypothetical protein VITISV_027733 [Vitis vinifera]
          Length = 268

 Score =  244 bits (623), Expect = 1e-62
 Identities = 129/192 (67%), Positives = 145/192 (75%), Gaps = 14/192 (7%)
 Frame = +2

Query: 23  KPWYQRAMEMATQWKTFSKSTEIPTTNSTLWXXXXXXXXXXXXXXXX------NKPKLRK 184
           KPWYQRAMEMAT WKT SKSTEIPT N+TLW                      ++ KLRK
Sbjct: 78  KPWYQRAMEMATLWKTISKSTEIPTANTTLWKTISKSAAIRTTTTTTTTTTNPHRQKLRK 137

Query: 185 CTSLRVATSFTRVCLCAPISSYTEVFQSEIPPRRSNSYPRSKPFPTSPQERMPSARISM- 361
           CTSLRVATSFTRVCLCAPISSYTEVF++E+PPRRSNSYPRSKPFP SPQER+ +ARISM 
Sbjct: 138 CTSLRVATSFTRVCLCAPISSYTEVFRAELPPRRSNSYPRSKPFP-SPQERISNARISME 196

Query: 362 -------EGRKIFRGKSLTDDVLMRRFVVEEEAMMQIKRRNQMEIIXXXXXXXXXXLGPS 520
                  EGR++FRGKSLTDDVLMRRFVVEEEAM+Q++RRNQME+I          LGPS
Sbjct: 197 GSARVSAEGRRVFRGKSLTDDVLMRRFVVEEEAMIQVRRRNQMEVIRRRSAMRRKKLGPS 256

Query: 521 PLSRMVLAELDE 556
           PLSRMV+AE +E
Sbjct: 257 PLSRMVMAEEEE 268


>ref|XP_002325601.1| predicted protein [Populus trichocarpa] gi|118484437|gb|ABK94095.1|
           unknown [Populus trichocarpa]
           gi|222862476|gb|EEE99982.1| predicted protein [Populus
           trichocarpa]
          Length = 206

 Score =  239 bits (611), Expect = 3e-61
 Identities = 129/205 (62%), Positives = 148/205 (72%), Gaps = 20/205 (9%)
 Frame = +2

Query: 2   PKNSHKRKPWYQRAMEMATQWKTFSKSTEIPTT-------------------NSTLWXXX 124
           PKNSH RKPWYQ+A+EMATQWKT SKSTEI TT                   N TLW   
Sbjct: 4   PKNSHTRKPWYQKAIEMATQWKTISKSTEISTTTTNPGLWKAISKSKEVPNKNRTLWKTI 63

Query: 125 XXXXXXXXXXXXXNKPKLRKCTSLRVATSFTRVCLCAPISSYTEVFQSEIPPRRSNSYPR 304
                        N+ KLRKC+S+RVAT+FTRVCLCAPISSY EVF++++PPRRSNSYPR
Sbjct: 64  SRSTEIPTTNP--NRAKLRKCSSVRVATTFTRVCLCAPISSYNEVFRADVPPRRSNSYPR 121

Query: 305 SKPFPTSPQERMPSARISMEGRK-IFRGKSLTDDVLMRRFVVEEEAMMQIKRRNQMEIIX 481
           SKPFP + QER+PSAR SMEGR+ IFRGKSLTDDVLMRRFV+EEEAMMQ KRRNQ+E+I 
Sbjct: 122 SKPFP-AVQERVPSARPSMEGRRVIFRGKSLTDDVLMRRFVLEEEAMMQTKRRNQVEVIW 180

Query: 482 XXXXXXXXXLGPSPLSRMVLAELDE 556
                    LGPSPLSRMV+A ++E
Sbjct: 181 RRTMLRRKKLGPSPLSRMVMATIEE 205


>ref|XP_003520180.1| PREDICTED: uncharacterized protein LOC100813395 [Glycine max]
          Length = 213

 Score =  222 bits (566), Expect = 5e-56
 Identities = 116/179 (64%), Positives = 133/179 (74%), Gaps = 4/179 (2%)
 Frame = +2

Query: 20  RKPWYQRAMEMATQWKTFSKSTEIPTTNS-TLWXXXXXXXXXXXXXXXX---NKPKLRKC 187
           RKPWYQRA+E+ + WK+ SKSTEIPT NS TLW                   NK KLRKC
Sbjct: 30  RKPWYQRAIEVTSLWKSVSKSTEIPTPNSSTLWKRSSSMPKSPQVPTTPSPNNKNKLRKC 89

Query: 188 TSLRVATSFTRVCLCAPISSYTEVFQSEIPPRRSNSYPRSKPFPTSPQERMPSARISMEG 367
            SL+VA+SFTRVCLCAPI SY E+ ++E+PPRRSNSYPRSKP   S  ER PSAR+S EG
Sbjct: 90  ASLKVASSFTRVCLCAPIYSYNEILRAEVPPRRSNSYPRSKPLHAS-HERTPSARLSTEG 148

Query: 368 RKIFRGKSLTDDVLMRRFVVEEEAMMQIKRRNQMEIIXXXXXXXXXXLGPSPLSRMVLA 544
           R++FRGKSLTDDVLMRRFV+EEEAMMQI+RRNQME+I          LGPSPLSRMV+A
Sbjct: 149 RRVFRGKSLTDDVLMRRFVIEEEAMMQIRRRNQMEVIRKRSMMRRKKLGPSPLSRMVMA 207


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