BLASTX nr result

ID: Panax21_contig00028533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028533
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635513.1| PREDICTED: uncharacterized protein LOC100261...   129   4e-28
emb|CBI41084.3| unnamed protein product [Vitis vinifera]              123   3e-26
ref|XP_002534088.1| conserved hypothetical protein [Ricinus comm...   120   2e-25
ref|XP_002309988.1| predicted protein [Populus trichocarpa] gi|2...   110   3e-22
ref|XP_003635265.1| PREDICTED: uncharacterized protein LOC100853...   109   4e-22

>ref|XP_003635513.1| PREDICTED: uncharacterized protein LOC100261790 [Vitis vinifera]
          Length = 160

 Score =  129 bits (324), Expect = 4e-28
 Identities = 86/183 (46%), Positives = 103/183 (56%), Gaps = 7/183 (3%)
 Frame = +3

Query: 66  VMAGKR---QFRRTTSMTGITVDFEEPAGPPLGFQISPITGDDPVI----MDSGSGGPRD 224
           +M GKR   Q +RTTSMTGITVD      P      +PI           M +GS G  D
Sbjct: 1   MMLGKRARPQIKRTTSMTGITVDLGHVEAPAPADPQNPIKDVHAAARVENMVAGSNG-YD 59

Query: 225 HSLMAAMVSPXXXXXXXXXPTDNSNKCAETTTAHFLRTCGLCQRRLAPGRDIYMYRGDTA 404
              +AA VSP            +S +  ET  AHFLRTCGLCQRRL PGRDIYMYRGDTA
Sbjct: 60  PRFLAATVSPRIHRR-------SSGEFMET--AHFLRTCGLCQRRLQPGRDIYMYRGDTA 110

Query: 405 FCSIECREQQMKHDERKNKCLVVAHNASSMTKEEYHHHNHDNYSETSTATSDASGNTETF 584
           FCS+ECREQQMK DERK K     ++  +  KE++ HH        ++A + A+   ET 
Sbjct: 111 FCSLECREQQMKQDERKEK-----YSGMASKKEDHRHH--------ASAQTAAASEGETL 157

Query: 585 AAA 593
           AAA
Sbjct: 158 AAA 160


>emb|CBI41084.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score =  123 bits (308), Expect = 3e-26
 Identities = 84/178 (47%), Positives = 100/178 (56%), Gaps = 3/178 (1%)
 Frame = +3

Query: 66  VMAGKR---QFRRTTSMTGITVDFEEPAGPPLGFQISPITGDDPVIMDSGSGGPRDHSLM 236
           +M GKR   Q +RTTSMTGITVD        LG             M +GS G  D   +
Sbjct: 9   MMLGKRARPQIKRTTSMTGITVD--------LGHN-----------MVAGSNG-YDPRFL 48

Query: 237 AAMVSPXXXXXXXXXPTDNSNKCAETTTAHFLRTCGLCQRRLAPGRDIYMYRGDTAFCSI 416
           AA VSP            +S +  ET  AHFLRTCGLCQRRL PGRDIYMYRGDTAFCS+
Sbjct: 49  AATVSPRIHRR-------SSGEFMET--AHFLRTCGLCQRRLQPGRDIYMYRGDTAFCSL 99

Query: 417 ECREQQMKHDERKNKCLVVAHNASSMTKEEYHHHNHDNYSETSTATSDASGNTETFAA 590
           ECREQQMK DERK K     ++  +  KE++ HH        ++A + A+   ET AA
Sbjct: 100 ECREQQMKQDERKEK-----YSGMASKKEDHRHH--------ASAQTAAASEGETLAA 144


>ref|XP_002534088.1| conserved hypothetical protein [Ricinus communis]
           gi|223525867|gb|EEF28292.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score =  120 bits (300), Expect = 2e-25
 Identities = 66/121 (54%), Positives = 79/121 (65%)
 Frame = +3

Query: 231 LMAAMVSPXXXXXXXXXPTDNSNKCAETTTAHFLRTCGLCQRRLAPGRDIYMYRGDTAFC 410
           L A M+SP         PT   N      TA+FLRTCGLCQRRLAPG+DIYMYRGDTAFC
Sbjct: 52  LAATMLSPRNV------PT-RRNSADYLETANFLRTCGLCQRRLAPGKDIYMYRGDTAFC 104

Query: 411 SIECREQQMKHDERKNKCLVVAHNASSMTKEEYHHHNHDNYSETSTATSDASGNTETFAA 590
           S+ECRE+QMKHDERK KC+    NA   +K+E  H +    +  S ++S +S  TET AA
Sbjct: 105 SLECREKQMKHDERKEKCI----NAIMGSKKEDRHASPSTTNSASKSSSSSSRKTETVAA 160

Query: 591 A 593
           A
Sbjct: 161 A 161


>ref|XP_002309988.1| predicted protein [Populus trichocarpa] gi|222852891|gb|EEE90438.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  110 bits (274), Expect = 3e-22
 Identities = 83/204 (40%), Positives = 103/204 (50%), Gaps = 28/204 (13%)
 Frame = +3

Query: 66  VMAGKRQ---FRRTTSMTGITVDF--------EEP-----------AGPPLGFQISPITG 179
           ++ GKR     RRT SMTGITVD          EP           AGP  G   S    
Sbjct: 1   MLLGKRPRGPMRRTASMTGITVDLPRNVDAGSSEPNSDNNDTLHATAGPEEG---SLDYH 57

Query: 180 DDPVIMDSGSGGP------RDHSLMAAMVSPXXXXXXXXXPTDNSNKCAETTTAHFLRTC 341
            +  ++D+  GG        D  L+A MVSP          +D+S+   E   AHFLRTC
Sbjct: 58  HNNNMVDAFDGGNTSGFLLHDQRLLATMVSPRNHYRS----SDSSDHFVEA--AHFLRTC 111

Query: 342 GLCQRRLAPGRDIYMYRGDTAFCSIECREQQMKHDERKNKCLVVAHNASSMTKEEYHHHN 521
           GLC+RRL PG+D++MYRGD AFCS ECREQQMK D RK K  V+  +            N
Sbjct: 112 GLCKRRLGPGKDLFMYRGDMAFCSQECREQQMKQDARKEKGNVMIAS-----------KN 160

Query: 522 HDNYSETSTATSDASGNTETFAAA 593
            D  +  ST +S +S  +ET AAA
Sbjct: 161 EDRRASASTTSSKSSRKSETLAAA 184


>ref|XP_003635265.1| PREDICTED: uncharacterized protein LOC100853335 [Vitis vinifera]
           gi|296086864|emb|CBI33031.3| unnamed protein product
           [Vitis vinifera]
          Length = 81

 Score =  109 bits (272), Expect = 4e-22
 Identities = 55/92 (59%), Positives = 65/92 (70%)
 Frame = +3

Query: 318 TAHFLRTCGLCQRRLAPGRDIYMYRGDTAFCSIECREQQMKHDERKNKCLVVAHNASSMT 497
           TAHFLRTCGLCQRRL PGRDIYMYRGDTAFCS+ECREQQMK DERK K     ++  +  
Sbjct: 3   TAHFLRTCGLCQRRLQPGRDIYMYRGDTAFCSLECREQQMKQDERKEK-----YSGMASK 57

Query: 498 KEEYHHHNHDNYSETSTATSDASGNTETFAAA 593
           KE++ HH        ++A + A+   ET AAA
Sbjct: 58  KEDHRHH--------ASAQTAAASEGETLAAA 81


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