BLASTX nr result

ID: Panax21_contig00028519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028519
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522842.1| GDP-mannose transporter, putative [Ricinus c...   169   4e-40
ref|XP_002274276.2| PREDICTED: GDP-mannose transporter GONST1-li...   163   2e-38
emb|CBI37536.3| unnamed protein product [Vitis vinifera]              163   2e-38
ref|XP_002306245.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36
ref|XP_004164296.1| PREDICTED: GDP-mannose transporter GONST1-li...   149   4e-34

>ref|XP_002522842.1| GDP-mannose transporter, putative [Ricinus communis]
           gi|223537926|gb|EEF39540.1| GDP-mannose transporter,
           putative [Ricinus communis]
          Length = 485

 Score =  169 bits (427), Expect = 4e-40
 Identities = 83/109 (76%), Positives = 95/109 (87%)
 Frame = -1

Query: 329 R*SFAMKTLGDDKFDVEGGKFENDREKLIRSTRVVKINNQALLSGLAYCMSSCSMILVNK 150
           R SF M++  +D+ D+EGGK E DR+K  RS R +KI NQALLSGLAYC+SSCSMILVNK
Sbjct: 38  RSSFTMRSHENDEIDLEGGKLEKDRDKTTRSNRALKIQNQALLSGLAYCISSCSMILVNK 97

Query: 149 YVLSSYDFNAGISLMFYQNFVSVLIVSMLSILGIISTEPLTWRLIKVWL 3
           +VLSSYDFNAGISLM YQNF+SV+IVS+LS LGIISTEPLTWRLIKVWL
Sbjct: 98  FVLSSYDFNAGISLMVYQNFISVIIVSVLSFLGIISTEPLTWRLIKVWL 146


>ref|XP_002274276.2| PREDICTED: GDP-mannose transporter GONST1-like [Vitis vinifera]
          Length = 501

 Score =  163 bits (412), Expect = 2e-38
 Identities = 77/106 (72%), Positives = 93/106 (87%)
 Frame = -1

Query: 320 FAMKTLGDDKFDVEGGKFENDREKLIRSTRVVKINNQALLSGLAYCMSSCSMILVNKYVL 141
           F+MK LG ++ D+E GK E DREK +RS RVV+I+NQALLSG AYC+SSCSMILVNK+VL
Sbjct: 41  FSMKPLGSEETDLEDGKLEKDREKSVRSNRVVRIHNQALLSGFAYCISSCSMILVNKFVL 100

Query: 140 SSYDFNAGISLMFYQNFVSVLIVSMLSILGIISTEPLTWRLIKVWL 3
           SSYDFNAGISLM YQN VSV++V++LS  G+I+TEPLTW+LIKVWL
Sbjct: 101 SSYDFNAGISLMIYQNLVSVIVVTVLSFFGLITTEPLTWKLIKVWL 146


>emb|CBI37536.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  163 bits (412), Expect = 2e-38
 Identities = 77/106 (72%), Positives = 93/106 (87%)
 Frame = -1

Query: 320 FAMKTLGDDKFDVEGGKFENDREKLIRSTRVVKINNQALLSGLAYCMSSCSMILVNKYVL 141
           F+MK LG ++ D+E GK E DREK +RS RVV+I+NQALLSG AYC+SSCSMILVNK+VL
Sbjct: 309 FSMKPLGSEETDLEDGKLEKDREKSVRSNRVVRIHNQALLSGFAYCISSCSMILVNKFVL 368

Query: 140 SSYDFNAGISLMFYQNFVSVLIVSMLSILGIISTEPLTWRLIKVWL 3
           SSYDFNAGISLM YQN VSV++V++LS  G+I+TEPLTW+LIKVWL
Sbjct: 369 SSYDFNAGISLMIYQNLVSVIVVTVLSFFGLITTEPLTWKLIKVWL 414


>ref|XP_002306245.1| predicted protein [Populus trichocarpa] gi|222855694|gb|EEE93241.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  155 bits (393), Expect = 4e-36
 Identities = 75/104 (72%), Positives = 88/104 (84%)
 Frame = -1

Query: 314 MKTLGDDKFDVEGGKFENDREKLIRSTRVVKINNQALLSGLAYCMSSCSMILVNKYVLSS 135
           MK+  +D+ D+EGGK   D++K  RS  V++I NQAL SG+AYC+SSCSMILVNKYVLSS
Sbjct: 1   MKSHENDEIDLEGGKLVKDKDKPTRSKGVIRIQNQALFSGIAYCISSCSMILVNKYVLSS 60

Query: 134 YDFNAGISLMFYQNFVSVLIVSMLSILGIISTEPLTWRLIKVWL 3
           YDFNAGISLM YQNF+SV+IVS L  LG+ISTEPLTWRLIKVWL
Sbjct: 61  YDFNAGISLMLYQNFISVIIVSTLRFLGVISTEPLTWRLIKVWL 104


>ref|XP_004164296.1| PREDICTED: GDP-mannose transporter GONST1-like [Cucumis sativus]
          Length = 336

 Score =  149 bits (376), Expect = 4e-34
 Identities = 71/104 (68%), Positives = 88/104 (84%)
 Frame = -1

Query: 314 MKTLGDDKFDVEGGKFENDREKLIRSTRVVKINNQALLSGLAYCMSSCSMILVNKYVLSS 135
           MK   + + D+E GK   DR+K +R+ R  +++NQALLSGLAYC+SSCSMILVNK VLSS
Sbjct: 1   MKHFENGESDLEEGKMGKDRDKALRNNRAFRLHNQALLSGLAYCISSCSMILVNKLVLSS 60

Query: 134 YDFNAGISLMFYQNFVSVLIVSMLSILGIISTEPLTWRLIKVWL 3
           YDFNAGISLM YQNF+SV IV++LS++GIISTEPLTWRL+KVW+
Sbjct: 61  YDFNAGISLMVYQNFISVSIVTILSVMGIISTEPLTWRLVKVWM 104


Top